Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0329831 Helianthus annuus HOM05D055804 ORTHO05D008225 4.1e-93 344.7 176 100.0
HanXRQChr05g0137651 Helianthus annuus HOM05D000252 ORTHO05D008225 5.8e-39 164.9 186 54.8
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 6.6e-35 151.4 186 51.6
BolC2t09362H Brassica oleracea HOM05D000252 ORTHO05D008225 5.6e-34 148.3 191 47.1
AL6G43390 Arabidopsis lyrata HOM05D000252 ORTHO05D008225 1.6e-33 146.7 187 49.2
THA.LOC104806768 Tarenaya hassleriana HOM05D000252 ORTHO05D008225 1.6e-33 146.7 187 49.7
A09p29350 Brassica napus HOM05D000252 ORTHO05D008225 2.8e-33 146.0 187 48.7
BraA09t38502Z Brassica rapa HOM05D000252 ORTHO05D008225 2.8e-33 146.0 187 48.7
AT4G09750 Arabidopsis thaliana HOM05D000252 ORTHO05D008225 3.6e-33 145.6 187 49.2
CARHR260740 Cardamine hirsuta HOM05D000252 ORTHO05D008225 3.6e-33 145.6 187 49.2
Carub.0006s2822 Capsella rubella HOM05D000252 ORTHO05D008225 4.7e-33 145.2 187 48.7
Migut.C00148 Erythranthe guttata HOM05D000252 ORTHO05D008225 4.7e-33 145.2 187 49.7
BcaC04g20974 Brassica carinata HOM05D000252 ORTHO05D008225 1.1e-32 144.1 187 48.1
C09p37410 Brassica napus HOM05D000252 ORTHO05D008225 1.1e-32 144.1 187 48.1
BolC9t56571H Brassica oleracea HOM05D000252 ORTHO05D008225 1.1e-32 144.1 187 48.1
Sp6g07750 Schrenkiella parvula HOM05D000252 ORTHO05D008225 1.1e-32 144.1 187 48.1
BcaB01g01425 Brassica carinata HOM05D000252 ORTHO05D008225 2.4e-32 142.9 187 48.1
Thhalv10028805m.g Eutrema salsugineum HOM05D000252 ORTHO05D008225 3.1e-32 142.5 187 47.6
Lsat_1_v5_gn_1_5160 Lactuca sativa HOM05D000252 ORTHO05D008225 6.8e-32 141.4 186 49.5
Sopen04g028040 Solanum pennellii HOM05D000252 ORTHO05D008225 4.4e-31 138.7 187 46.0
Prupe.8G041900 Prunus persica HOM05D000252 ORTHO05D008225 7.6e-31 137.9 186 49.5
Cpa.g.sc26.104 Carica papaya HOM05D000252 ORTHO05D008225 9.9e-31 137.5 187 46.0
FAN20G2468 Fragaria x ananassa HOM05D000252 ORTHO05D008225 1.7e-30 136.7 183 47.5
Lj7A385T61 Lonicera japonica HOM05D000252 ORTHO05D008225 2.2e-30 136.3 190 47.4
Sed0027840 Sechium edule HOM05D000252 ORTHO05D008225 2.2e-30 136.3 186 45.7
Solyc04g072033.1 Solanum lycopersicum HOM05D000252 ORTHO05D008225 2.2e-30 136.3 187 45.5
Dinv41028 Davidia involucrata HOM05D000252 ORTHO05D008225 2.9e-30 136.0 186 47.3
Lalb_Chr03g0035631 Lupinus albus HOM05D000252 ORTHO05D008225 2.9e-30 136.0 185 46.5
COL.COLO4_13738 Corchorus olitorius HOM05D002713 ORTHO05D008225 3.8e-30 135.6 185 48.1
CAN.G1183.11 Capsicum annuum HOM05D000252 ORTHO05D008225 6.4e-30 134.8 189 45.5
Duzib116G0862 Durio zibethinus HOM05D000252 ORTHO05D008225 6.4e-30 134.8 182 47.8
FAN15G0190 Fragaria x ananassa HOM05D000252 ORTHO05D008225 8.4e-30 134.4 186 48.9
MD10G1036200 Malus domestica HOM05D000252 ORTHO05D008225 8.4e-30 134.4 186 47.8
Manes.18G095400 Manihot esculenta HOM05D000252 ORTHO05D008225 8.4e-30 134.4 187 46.5
PGSC0003DMG402025057 Solanum tuberosum HOM05D000252 ORTHO05D008225 8.4e-30 134.4 187 44.9
AUR62026630 Chenopodium quinoa HOM05D000252 ORTHO05D008225 1.1e-29 134.0 185 45.9
MSTRG.973 Avicennia marina HOM05D000252 ORTHO05D008225 1.4e-29 133.7 185 46.5
AUR62034887 Chenopodium quinoa HOM05D000252 ORTHO05D008225 1.4e-29 133.7 187 46.5
FvH4_2g12970 Fragaria vesca HOM05D000252 ORTHO05D008225 1.4e-29 133.7 186 48.9
FAN24G1341 Fragaria x ananassa HOM05D000252 ORTHO05D008225 1.4e-29 133.7 186 48.9
SalBow7G3195 Salvia bowleyana HOM05D000252 ORTHO05D008225 1.4e-29 133.7 187 47.1
TAR381G0219 Trochodendron aralioides HOM05D000252 ORTHO05D008225 1.4e-29 133.7 186 47.3
vmacro21129 Vaccinium macrocarpon HOM05D000252 ORTHO05D008225 1.4e-29 133.7 186 47.8
Atru.chr13.1997 Acer truncatum HOM05D000252 ORTHO05D008225 1.9e-29 133.3 187 45.5
Ca_04665_v3 Cicer arietinum L. HOM05D000252 ORTHO05D008225 1.9e-29 133.3 189 46.6
MELO3C024061.2 Cucumis melo HOM05D000252 ORTHO05D008225 1.9e-29 133.3 186 45.7
MBI04_g33334_MAGBIO Magnolia biondii HOM05D000252 ORTHO05D008225 1.9e-29 133.3 186 46.2
Nitab4.5_0003770g0020 Nicotiana tabacum HOM05D000252 ORTHO05D008225 1.9e-29 133.3 183 44.8
Sc02g0003800 Simmondsia chinensis HOM05D000252 ORTHO05D008225 1.9e-29 133.3 186 46.8
arahy.Tifrunner.gnm1.ann1.NU16HH Arachis hypogaea HOM05D000252 ORTHO05D008225 2.4e-29 132.9 185 45.4
FAN27G1385 Fragaria x ananassa HOM05D000252 ORTHO05D008225 2.4e-29 132.9 185 48.6
Peaxi162Scf00360g00617 Petunia axillaris HOM05D000252 ORTHO05D008225 2.4e-29 132.9 161 50.9
Hund17493 Selenicereus undatus HOM05D000252 ORTHO05D008225 2.4e-29 132.9 187 45.5
Glyma.02G078600 Glycine max HOM05D000252 ORTHO05D008225 3.2e-29 132.5 186 46.8
Lj2g0016577 Lotus japonicus HOM05D000252 ORTHO05D008225 3.2e-29 132.5 186 45.7
Phvul.004G089200 Phaseolus vulgaris HOM05D000252 ORTHO05D008225 4.1e-29 132.1 186 46.2
Cc10_g15360 Coffea canephora HOM05D000252 ORTHO05D008225 5.4e-29 131.7 186 46.8
Medtr6g041980 Medicago truncatula HOM05D000252 ORTHO05D008225 5.4e-29 131.7 186 44.6
PSO170G6236 Papaver somniferum HOM05D000252 ORTHO05D008225 5.4e-29 131.7 161 49.7
Potri.005G197700 Populus trichocarpa HOM05D000252 ORTHO05D008225 5.4e-29 131.7 186 45.7
RcHm_v2.0_Chr6g0274101 Rosa chinensis HOM05D000252 ORTHO05D008225 5.4e-29 131.7 186 46.8
Gohir.A06G111600 Gossypium hirsutum HOM05D000252 ORTHO05D008225 7.1e-29 131.3 185 46.5
Thecc.08G160400 Theobroma cacao HOM05D000252 ORTHO05D008225 7.1e-29 131.3 186 46.2
arahy.Tifrunner.gnm1.ann1.LWF4SI Arachis hypogaea HOM05D000252 ORTHO05D008225 9.2e-29 131.0 185 44.9
COL.COLO4_22296 Corchorus olitorius HOM05D000252 ORTHO05D008225 1.2e-28 130.6 185 47.0
CsaV3_7G024450 Cucumis sativus L. HOM05D002084 ORTHO05D008225 1.2e-28 130.6 186 45.2
Manes.18G095300 Manihot esculenta HOM05D000252 ORTHO05D008225 1.2e-28 130.6 187 45.5
Nn1g05994 Nelumbo nucifera HOM05D000252 ORTHO05D008225 1.2e-28 130.6 185 45.9
Nitab4.5_0000099g0270 Nicotiana tabacum HOM05D000252 ORTHO05D008225 1.6e-28 130.2 195 42.1
Solyc04g072034.1 Solanum lycopersicum HOM05D000252 ORTHO05D008225 1.6e-28 130.2 183 44.8
VMungo0464G0845 Vigna mungo HOM05D000252 ORTHO05D008225 1.6e-28 130.2 187 44.9
Haze_17808 Corylus avellana HOM05D000252 ORTHO05D008225 2.1e-28 129.8 187 45.5
Eucgr.F04169 Eucalyptus grandis HOM05D000252 ORTHO05D008225 2.1e-28 129.8 179 46.9
CiPaw.15G012100 Carya illinoinensis HOM05D000252 ORTHO05D008225 3.5e-28 129.0 186 46.2
Psat0s3597g0040 Pisum sativum HOM05D000252 ORTHO05D008225 3.5e-28 129.0 186 43.5
Gohir.D06G115900 Gossypium hirsutum HOM05D000252 ORTHO05D008225 4.6e-28 128.6 185 45.9
PSO210G0631 Papaver somniferum HOM05D000252 ORTHO05D008225 6.0e-28 128.3 183 45.4
Sabra05G0150400 Salix brachista HOM05D000252 ORTHO05D008225 6.0e-28 128.3 186 45.2
Oeu046073.1 Olea europaea HOM05D000252 ORTHO05D008225 7.8e-28 127.9 186 44.6
Rhsim06G0128200 Rhododendron simsii HOM05D000252 ORTHO05D008225 1.0e-27 127.5 194 44.3
Sopen04g028050 Solanum pennellii HOM05D000252 ORTHO05D008225 1.3e-27 127.1 188 44.1
GSVIVG01001427001 Vitis vinifera HOM05D000252 ORTHO05D008225 1.7e-27 126.7 185 44.9
DCAR_014320 Daucus carota HOM05D000252 ORTHO05D008225 8.7e-27 124.4 187 43.9
EL10Ac1g01610 Beta vulgaris HOM05D000252 ORTHO05D008225 1.1e-26 124.0 187 43.9
CDE06G1125 Ceratophyllum demersum HOM05D000252 ORTHO05D008225 1.5e-26 123.6 186 43.0
Eucgr.F04171 Eucalyptus grandis HOM05D000252 ORTHO05D008225 1.5e-26 123.6 186 44.6
Aqoxy5G02021 Aquilegia oxysepala HOM05D000252 ORTHO05D008225 1.9e-26 123.2 184 44.6
TWI34G0678 Tripterygium wilfordii HOM05D000252 ORTHO05D008225 1.9e-26 123.2 185 43.8
ATR0322G044 Amborella trichopoda HOM05D000252 ORTHO05D008225 2.5e-26 122.9 186 45.2
Gorai.010G133600 Gossypium raimondii HOM05D000252 ORTHO05D008225 1.6e-25 120.2 228 39.0
HanXRQChr14g0432871 Helianthus annuus HOM05D044620 ORTHO05D226111 1.6e-25 120.2 67 91.0
HanXRQChr15g0492851 Helianthus annuus HOM05D044620 ORTHO05D227349 1.6e-25 120.2 67 91.0
PGR102G2743 Punica granatum HOM05D000252 ORTHO05D008225 8.1e-25 117.9 185 41.1
PSO135G0690 Papaver somniferum HOM05D000252 ORTHO05D008225 1.1e-24 117.5 184 41.8
Ciclev10001743m.g Citrus clementina HOM05D000252 ORTHO05D008225 1.8e-24 116.7 185 41.1
unitig_0.g2072 Utricularia gibba HOM05D000252 ORTHO05D008225 1.8e-24 116.7 110 57.3
HanXRQChr11g0330161 Helianthus annuus HOM05D055804 ORTHO05D226051 4.0e-24 115.5 65 87.7
PSO384G2237 Papaver somniferum HOM05D000252 ORTHO05D008225 5.2e-24 115.2 184 40.8
Zm00001eb386150 Zea mays HOM05D000252 ORTHO05D008225 2.0e-23 113.2 187 41.2
SEGI_33347 Sequoiadendron giganteum HOM05D000252 ORTHO05D008225 2.6e-23 112.8 187 39.6
HPP92_021783 Vanilla planifolia HOM05D000252 ORTHO05D008225 5.8e-23 111.7 98 60.2
HanXRQChr11g0330171 Helianthus annuus HOM05D000252 ORTHO05D222516 1.7e-22 110.2 98 67.3
TPR.G30966 Trifolium pratense HOM05D000252 ORTHO05D008225 1.7e-22 110.2 115 51.3
SMO147G0257 Selaginella moellendorffii HOM05D000252 ORTHO05D008225 2.2e-22 109.8 187 38.5
Os06g0590301 Oryza sativa ssp. japonica HOM05D000252 ORTHO05D008225 4.9e-22 108.6 185 40.0
TPR.G955 Trifolium pratense HOM05D000252 ORTHO05D008225 4.9e-22 108.6 114 50.9
Ah.05g168210 Amaranthus hybridus HOM05D000252 ORTHO05D008225 6.4e-22 108.2 109 56.9
EL10Ac9g22793 Beta vulgaris HOM05D000252 ORTHO05D008225 1.6e-20 103.6 99 55.6
QL02p037260 Quercus lobata HOM05D000252 ORTHO05D008225 1.9e-18 96.7 125 48.8
ClCG09G010250 Citrullus lanatus HOM05D000252 ORTHO05D008225 4.8e-17 92.0 125 48.0
SGA_v2.0_scaffold133G34675 Striga asiatica HOM05D000252 ORTHO05D008225 6.2e-17 91.7 125 48.0
Gohir.D06G115950 Gossypium hirsutum HOM05D000252 ORTHO05D008225 1.4e-16 90.5 125 48.0
Mapoly0020s0012 Marchantia polymorpha HOM05D000252 ORTHO05D008225 3.1e-16 89.4 177 37.3
Pp3c12_19420 Physcomitrium patens HOM05D000252 ORTHO05D008225 9.9e-15 84.3 189 34.9
AagrBONN_evm.TU.Sc2ySwM_117.1965 Anthoceros agrestis HOM05D002028 ORTHO05D002474 2.9e-14 82.8 186 34.4
AagrBONN_evm.TU.Sc2ySwM_368.716 Anthoceros agrestis HOM05D000252 ORTHO05D008225 7.1e-13 78.2 108 42.6
QL02p037306 Quercus lobata HOM05D000252 ORTHO05D008225 1.8e-11 73.6 54 64.8
PRCOL_00002698 Prasinoderma coloniale HOM05D000252 ORTHO05D008225 5.6e-10 68.6 196 28.6
Eucgr.F04174 Eucalyptus grandis HOM05D000252 ORTHO05D008225 4.8e-09 65.5 116 40.5
Cre08.g381516 Chlamydomonas reinhardtii HOM05D000252 ORTHO05D008225 9.9e-07 57.8 202 26.2
Duzib093G0681 Durio zibethinus HOM05D000252 ORTHO05D008225 2.9e-06 56.2 103 41.7
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.4e-06 54.7 47 57.4


User provided reference genes

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