Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 4.4e-29 130.6 64 100.0
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 4.4e-29 130.6 64 100.0
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 9.8e-29 129.4 64 96.9
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 5.4e-27 123.6 64 92.2
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 5.4e-27 123.6 64 92.2
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.6e-26 122.1 63 92.1
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 2.0e-26 121.7 64 92.2
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 2.7e-26 121.3 64 90.6
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 5.9e-26 120.2 64 87.5
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 5.9e-26 120.2 64 89.1
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 5.9e-26 120.2 64 89.1
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 7.7e-26 119.8 64 89.1
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 1.3e-25 119.0 64 87.5
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.3e-25 118.2 64 87.5
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 2.9e-25 117.9 64 89.1
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 3.8e-25 117.5 64 84.4
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 3.8e-25 117.5 64 87.5
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 5.0e-25 117.1 64 85.9
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 6.6e-25 116.7 64 85.9
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 8.6e-25 116.3 64 87.5
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 8.6e-25 116.3 64 87.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 8.6e-25 116.3 64 87.5
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.1e-24 115.9 64 85.9
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 1.9e-24 115.2 64 85.9
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 2.5e-24 114.8 64 84.4
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 2.5e-24 114.8 64 85.9
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.5e-24 114.8 64 85.9
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.5e-24 114.8 64 85.9
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.5e-24 114.8 64 84.4
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 2.5e-24 114.8 64 82.8
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 2.5e-24 114.8 63 84.1
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 3.3e-24 114.4 64 84.4
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 3.3e-24 114.4 64 84.4
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 3.3e-24 114.4 64 85.9
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 4.3e-24 114.0 64 84.4
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 4.3e-24 114.0 64 84.4
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 5.6e-24 113.6 64 84.4
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 5.6e-24 113.6 64 82.8
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 5.6e-24 113.6 64 84.4
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 5.6e-24 113.6 64 84.4
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 5.6e-24 113.6 64 82.8
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 5.6e-24 113.6 64 82.8
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 5.6e-24 113.6 63 85.7
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 5.6e-24 113.6 64 81.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.3e-24 113.2 64 84.4
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.3e-24 113.2 64 84.4
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 7.3e-24 113.2 64 82.8
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 9.5e-24 112.8 64 82.8
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 9.5e-24 112.8 64 82.8
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 9.5e-24 112.8 64 82.8
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 9.5e-24 112.8 64 82.8
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 9.5e-24 112.8 64 82.8
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 9.5e-24 112.8 64 82.8
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.6e-23 112.1 64 82.8
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.1e-23 111.7 64 84.4
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.1e-23 111.7 64 84.4
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 2.1e-23 111.7 64 81.2
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.6e-23 110.9 62 85.5
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 4.7e-23 110.5 64 81.2
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 4.7e-23 110.5 64 81.2
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 8.0e-23 109.8 64 78.1
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 1.0e-22 109.4 64 81.2
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 1.8e-22 108.6 64 79.7
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 1.8e-22 108.6 64 79.7
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.8e-22 108.6 64 79.7
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.8e-22 108.6 64 79.7
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 2.3e-22 108.2 64 78.1
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 2.3e-22 108.2 64 78.1
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 2.3e-22 108.2 64 76.6
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 3.0e-22 107.8 64 76.6
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 3.0e-22 107.8 64 76.6
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 3.0e-22 107.8 64 76.6
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 3.0e-22 107.8 64 76.6
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 3.0e-22 107.8 64 76.6
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 3.0e-22 107.8 64 76.6
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 3.0e-22 107.8 64 76.6
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 3.0e-22 107.8 64 79.7
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 3.0e-22 107.8 60 83.3
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 4.0e-22 107.5 64 75.0
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 4.0e-22 107.5 64 75.0
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 4.0e-22 107.5 64 75.0
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 5.2e-22 107.1 64 81.2
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 6.8e-22 106.7 63 79.4
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 6.8e-22 106.7 63 77.8
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 8.9e-22 106.3 64 78.1
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.2e-21 105.9 64 76.6
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 1.2e-21 105.9 64 76.6
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.2e-21 105.9 58 84.5
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 2.6e-21 104.8 64 73.4
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 2.6e-21 104.8 64 75.0
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 4.9e-20 100.5 64 71.9
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 6.4e-20 100.1 64 71.9
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 2.4e-19 98.2 62 72.6
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.9e-16 88.6 46 89.1
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.8e-14 82.0 49 75.5
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 4.0e-14 80.9 64 65.6
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 1.5e-13 79.0 43 81.4
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 4.9e-12 73.9 43 74.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 1.0e-09 66.2 36 80.6


User provided reference genes

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