Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 6.5e-174 614.0 320 100.0
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 1.9e-128 463.0 320 75.9
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.1e-104 384.0 209 85.2
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 8.7e-102 374.4 329 57.4
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 2.2e-97 359.8 320 57.8
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.4e-96 357.1 324 56.8
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 3.2e-96 355.9 324 55.9
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 2.1e-95 353.2 334 56.6
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 2.7e-95 352.8 334 54.8
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.0e-94 350.9 331 55.0
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 5.1e-94 348.6 335 55.2
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 6.7e-94 348.2 326 54.3
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 6.3e-92 341.7 331 55.0
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 8.2e-92 341.3 305 56.4
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 8.2e-92 341.3 324 53.1
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 2.4e-91 339.7 357 53.5
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 2.4e-91 339.7 332 53.0
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 2.4e-91 339.7 336 52.4
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 6.9e-91 338.2 336 53.0
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 1.2e-90 337.4 302 55.6
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.5e-90 337.0 323 54.5
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 3.4e-90 335.9 331 54.1
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 5.9e-90 335.1 306 55.6
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 7.7e-90 334.7 324 53.4
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.3e-89 334.0 327 51.7
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.3e-89 334.0 338 51.8
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 3.8e-89 332.4 296 56.1
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 5.0e-89 332.0 293 58.7
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 5.0e-89 332.0 319 53.9
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 6.5e-89 331.6 323 52.9
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 6.5e-89 331.6 322 54.0
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 1.1e-88 330.9 266 59.8
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 1.4e-88 330.5 334 52.1
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 4.2e-88 328.9 332 51.8
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 2.7e-87 326.2 289 56.4
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 4.6e-87 325.5 215 68.8
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 3.9e-86 322.4 290 56.2
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 5.1e-86 322.0 324 58.0
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 5.1e-86 322.0 333 53.2
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 5.1e-86 322.0 207 71.0
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 8.8e-86 321.2 290 55.9
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.1e-85 320.9 278 55.8
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 1.1e-85 320.9 214 69.2
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.5e-85 320.5 216 70.4
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 2.0e-85 320.1 216 68.1
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 2.6e-85 319.7 216 68.5
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.7e-84 317.0 214 67.3
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.2e-84 316.6 318 51.6
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 3.7e-84 315.8 214 68.7
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 3.7e-84 315.8 327 52.0
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.1e-83 314.3 387 49.6
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 3.1e-83 312.8 214 66.8
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 5.3e-83 312.0 216 66.2
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 9.1e-83 311.2 214 67.3
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 9.1e-83 311.2 334 51.5
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 9.1e-83 311.2 214 68.7
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.2e-82 310.8 222 63.5
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.5e-82 310.5 214 66.8
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.5e-82 310.5 216 65.3
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 3.4e-82 309.3 322 50.3
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 4.5e-82 308.9 217 70.0
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 5.9e-82 308.5 332 50.3
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 1.7e-81 307.0 214 66.4
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.7e-81 307.0 215 66.0
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 9.4e-80 301.2 212 64.2
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.6e-79 300.4 220 60.5
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 2.1e-79 300.1 200 70.5
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.8e-78 297.0 219 61.6
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 8.8e-78 294.7 326 49.4
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 2.6e-77 293.1 326 47.9
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 2.6e-77 293.1 326 47.9
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 3.3e-77 292.7 326 49.1
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 3.3e-77 292.7 326 49.1
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.4e-77 292.4 283 53.4
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 7.4e-77 291.6 217 62.2
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 1.3e-76 290.8 329 46.8
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.8e-76 289.7 329 48.3
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 2.8e-76 289.7 285 51.6
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 3.7e-76 289.3 329 47.1
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 9.1e-75 284.6 315 47.0
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.6e-74 283.1 322 47.2
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 4.5e-74 282.3 336 46.4
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 6.5e-73 278.5 306 47.4
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 2.1e-71 273.5 189 66.7
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 2.7e-71 273.1 412 40.5
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.0e-70 269.6 340 45.0
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.0e-70 269.6 340 45.0
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 1.3e-68 264.2 173 67.6
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 3.5e-66 256.1 211 55.9
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 5.0e-65 252.3 293 48.8
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 4.0e-62 242.7 207 55.1
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.2e-61 241.1 209 53.6
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.3e-60 237.7 277 48.7
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 4.1e-59 232.6 334 41.6
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 2.9e-57 226.5 209 54.5
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 8.0e-55 218.4 157 65.0
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 2.6e-53 213.4 239 49.4
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 5.7e-53 212.2 243 49.0
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 5.7e-53 212.2 228 50.4
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 1.7e-52 210.7 287 42.9
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 7.8e-50 201.8 278 47.5
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 2.3e-49 200.3 276 41.3
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.5e-48 196.8 229 46.3
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 8.9e-46 188.3 219 45.2
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 1.8e-38 164.1 189 42.9
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.7e-31 139.4 97 64.9
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.9e-30 135.2 97 63.9
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 9.2e-27 125.2 194 37.1
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 3.5e-26 123.2 90 62.2
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 4.3e-24 116.3 167 43.7
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.9e-19 100.9 65 70.8
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 7.1e-11 72.4 175 33.7
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 1.2e-10 71.6 45 73.3
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 5.6e-08 62.8 39 69.2


User provided reference genes

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