Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 5.8e-266 920.2 438 100.0
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 2.5e-224 781.9 436 83.7
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 2.7e-223 778.5 437 82.8
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 3.7e-196 688.3 431 73.5
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 6.6e-193 677.6 425 73.2
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 5.6e-192 674.5 422 73.0
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.6e-191 672.9 418 75.1
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.7e-191 671.4 430 71.9
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.8e-190 669.5 421 72.4
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 1.8e-190 669.5 424 71.9
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 2.3e-190 669.1 420 71.9
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.5e-189 666.4 428 71.7
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.6e-189 665.6 427 72.6
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.6e-189 665.6 427 72.6
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 3.4e-189 665.2 422 73.0
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 7.5e-189 664.1 421 71.5
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.3e-188 663.3 421 71.7
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 1.3e-188 663.3 425 72.2
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.7e-188 662.9 429 71.6
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.7e-188 661.8 424 71.9
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 4.9e-188 661.4 426 72.1
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 6.4e-188 661.0 426 72.1
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 8.3e-188 660.6 421 71.5
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.1e-187 660.2 424 71.7
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.1e-187 660.2 421 71.7
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 1.1e-187 660.2 425 71.3
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.4e-187 659.1 425 72.2
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.4e-187 659.1 425 72.2
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 2.4e-187 659.1 437 69.6
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 4.1e-187 658.3 421 71.5
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 7.1e-187 657.5 424 71.5
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 9.2e-187 657.1 425 72.9
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.1e-186 656.0 424 71.2
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 2.1e-186 656.0 433 70.7
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 2.7e-186 655.6 421 71.0
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 6.0e-186 654.4 428 71.0
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 6.0e-186 654.4 430 70.9
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 7.8e-186 654.1 427 71.2
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.3e-185 653.3 425 70.6
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 1.7e-185 652.9 423 71.9
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 3.0e-185 652.1 428 71.7
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 3.0e-185 652.1 424 72.2
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 3.9e-185 651.7 424 70.3
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 1.9e-184 649.4 422 70.9
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 2.5e-184 649.0 421 70.1
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 3.3e-184 648.7 421 72.4
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 6.2e-183 644.4 431 68.2
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 8.1e-183 644.0 424 71.5
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 5.2e-182 641.3 421 71.0
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 8.9e-182 640.6 430 68.4
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 1.2e-181 640.2 424 70.0
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 2.0e-181 639.4 424 70.8
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.0e-181 639.4 426 69.5
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 2.6e-181 639.0 430 67.9
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 2.6e-181 639.0 421 70.8
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 4.4e-181 638.3 421 70.5
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 2.2e-180 636.0 420 70.0
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 2.9e-180 635.6 421 70.8
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.1e-179 633.6 428 68.5
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 1.4e-179 633.3 421 70.3
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 3.2e-179 632.1 427 67.4
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 3.2e-179 632.1 428 67.5
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 5.4e-179 631.3 417 70.7
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 9.2e-179 630.6 426 67.6
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 1.2e-178 630.2 422 69.2
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 3.5e-178 628.6 424 67.5
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 3.5e-178 628.6 420 69.5
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 7.8e-178 627.5 425 68.0
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 3.9e-177 625.2 426 67.6
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 5.1e-177 624.8 420 69.3
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 8.7e-177 624.0 429 68.1
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 8.7e-177 624.0 423 67.6
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 4.3e-176 621.7 428 67.3
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 9.6e-176 620.5 420 68.6
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 2.8e-175 619.0 428 67.8
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 3.6e-175 618.6 352 77.6
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.5e-173 613.2 359 76.0
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.0e-173 612.8 428 66.6
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.8e-173 611.3 421 68.2
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 1.3e-172 610.1 423 65.5
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 1.7e-172 609.8 423 65.7
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 3.8e-172 608.6 425 64.7
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 4.9e-172 608.2 355 76.3
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 4.2e-171 605.1 424 67.5
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 2.7e-170 602.4 360 73.6
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.0e-169 600.5 427 64.2
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 2.3e-169 599.4 425 66.1
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 8.7e-169 597.4 427 64.4
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.5e-168 595.9 430 66.0
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.5e-168 595.9 339 76.7
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 3.3e-168 595.5 421 64.6
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 3.3e-168 595.5 421 64.6
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 6.2e-167 591.3 428 63.1
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 3.1e-166 589.0 418 64.6
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 3.1e-166 589.0 421 63.7
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 5.3e-166 588.2 423 65.5
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 3.4e-165 585.5 427 63.7
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 9.9e-165 583.9 421 63.4
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 9.9e-165 583.9 421 63.4
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.3e-164 583.6 341 75.4
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 4.9e-164 581.6 426 62.9
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 4.9e-164 581.6 427 63.9
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 7.1e-163 577.8 379 68.6
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 8.7e-161 570.9 350 71.4
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.1e-160 570.5 359 69.6
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.9e-160 569.7 415 64.3
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.3e-159 567.0 386 65.3
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.3e-159 567.0 359 69.4
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 2.8e-159 565.8 384 65.6
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 6.2e-159 564.7 422 63.5
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 8.1e-159 564.3 401 66.1
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.4e-150 536.2 427 61.4
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 1.8e-145 520.0 282 79.8
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.0e-141 506.5 362 63.8
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 5.5e-139 498.4 282 76.6
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.4e-137 493.8 362 61.9
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.3e-132 477.2 352 59.9
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.4e-129 467.2 431 54.1
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 6.7e-121 438.3 324 65.4
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.5e-99 367.5 399 47.6
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 4.2e-99 365.9 209 75.6
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 4.2e-99 365.9 210 76.7
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.8e-97 360.5 215 72.6
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 7.0e-94 348.6 356 50.3
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.9e-63 246.1 197 61.9
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 4.2e-54 216.5 339 40.7
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.1e-30 138.7 94 62.8
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 9.0e-25 119.0 202 35.1
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 5.5e-22 109.8 80 57.5
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 2.8e-18 97.4 124 41.9
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 3.2e-06 57.4 74 45.9
CSS0018959 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D112597 4.2e-06 57.0 57 49.1


User provided reference genes

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