Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0328781 Helianthus annuus HOM05D008711 ORTHO05D010134 2.4e-154 548.9 291 100.0
HanXRQChr02g0057461 Helianthus annuus HOM05D008711 ORTHO05D010134 2.9e-112 409.1 232 96.1
HanXRQChr08g0219021 Helianthus annuus HOM05D008711 ORTHO05D010134 2.3e-77 293.1 233 69.5
HanXRQChr05g0155991 Helianthus annuus HOM05D008711 ORTHO05D010134 8.6e-56 221.5 209 53.6
HanXRQChr06g0173991 Helianthus annuus HOM05D008711 ORTHO05D010134 4.1e-42 176.0 181 56.4
HanXRQChr08g0228301 Helianthus annuus HOM05D008711 ORTHO05D010134 1.0e-40 171.4 196 45.4
HanXRQChr04g0112501 Helianthus annuus HOM05D008711 ORTHO05D010134 1.0e-32 144.8 232 37.9
HanXRQChr13g0411941 Helianthus annuus HOM05D008711 ORTHO05D010134 3.0e-32 143.3 232 37.5
HanXRQChr17g0570621 Helianthus annuus HOM05D008711 ORTHO05D010134 5.1e-32 142.5 233 39.5
HanXRQChr15g0469701 Helianthus annuus HOM05D008711 ORTHO05D010134 3.3e-31 139.8 228 39.5
HanXRQChr05g0153861 Helianthus annuus HOM05D008711 ORTHO05D010134 7.3e-31 138.7 230 36.1
HanXRQChr01g0007361 Helianthus annuus HOM05D008711 ORTHO05D010134 6.9e-29 132.1 228 38.6
HanXRQChr13g0421391 Helianthus annuus HOM05D008711 ORTHO05D010134 3.8e-27 126.3 223 38.1
Lsat_1_v5_gn_1_87921 Lactuca sativa HOM05D008711 ORTHO05D010134 1.1e-26 124.8 224 34.4
Lsat_1_v5_gn_5_68461 Lactuca sativa HOM05D008975 ORTHO05D010134 2.4e-26 123.6 200 35.5
Lsat_1_v5_gn_6_40041 Lactuca sativa HOM05D008711 ORTHO05D010134 3.2e-26 123.2 224 35.3
Lsat_1_v5_gn_7_49700 Lactuca sativa HOM05D008711 ORTHO05D010134 4.2e-26 122.9 208 35.6
Lsat_1_v5_gn_3_67000 Lactuca sativa HOM05D008711 ORTHO05D010134 7.1e-26 122.1 224 32.6
HanXRQChr10g0309221 Helianthus annuus HOM05D008711 ORTHO05D010134 9.3e-26 121.7 191 40.3
HanXRQChr09g0267211 Helianthus annuus HOM05D008711 ORTHO05D010134 2.1e-22 110.5 232 34.1
HanXRQChr09g0269311 Helianthus annuus HOM05D008711 ORTHO05D010134 1.1e-21 108.2 133 44.4
HanXRQChr02g0051481 Helianthus annuus HOM05D008711 ORTHO05D010134 6.9e-21 105.5 232 31.0
Lsat_1_v5_gn_1_46460 Lactuca sativa HOM05D008975 ORTHO05D010134 1.3e-19 101.3 183 34.4
Lsat_1_v5_gn_4_120840 Lactuca sativa HOM05D008711 ORTHO05D010134 1.3e-19 101.3 224 30.8
HanXRQChr13g0388401 Helianthus annuus HOM05D008711 ORTHO05D010134 1.9e-18 97.4 176 35.8
HanXRQChr17g0537921 Helianthus annuus HOM05D008711 ORTHO05D010134 7.1e-18 95.5 100 48.0
Lsat_1_v5_gn_4_114181 Lactuca sativa HOM05D008975 ORTHO05D010134 2.1e-17 94.0 183 30.6
Lsat_1_v5_gn_1_118581 Lactuca sativa HOM05D008975 ORTHO05D010134 7.9e-17 92.0 191 30.9
Lsat_1_v5_gn_6_66280 Lactuca sativa HOM05D008975 ORTHO05D010134 1.0e-16 91.7 220 26.8
Lsat_1_v5_gn_3_59061 Lactuca sativa HOM05D008975 ORTHO05D010134 2.3e-16 90.5 152 33.6
Lsat_1_v5_gn_1_81260 Lactuca sativa HOM05D008975 ORTHO05D010134 3.9e-16 89.7 171 29.8
Lsat_1_v5_gn_7_51421 Lactuca sativa HOM05D008975 ORTHO05D010134 8.7e-16 88.6 183 30.6
HanXRQChr16g0506101 Helianthus annuus HOM05D008711 ORTHO05D010134 2.5e-15 87.0 194 34.5
HanXRQChr16g0520831 Helianthus annuus HOM05D008711 ORTHO05D010134 9.6e-15 85.1 131 42.7
Lsat_1_v5_gn_8_17220 Lactuca sativa HOM05D008711 ORTHO05D010134 1.4e-13 81.3 195 30.8
Lsat_1_v5_gn_5_57501 Lactuca sativa HOM05D008711 ORTHO05D010134 1.5e-12 77.8 226 27.4
ECA247G3155 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.4e-11 72.0 211 28.9
HanXRQChr05g0146391 Helianthus annuus HOM05D008711 ORTHO05D010134 1.1e-10 71.6 65 49.2
HanXRQChr12g0356521 Helianthus annuus HOM05D008711 ORTHO05D010134 1.1e-10 71.6 65 49.2
Lsat_1_v5_gn_4_111900 Lactuca sativa HOM05D008711 ORTHO05D010134 1.9e-10 70.9 166 30.1
ECA238G3396 Erigeron canadensis HOM05D008959 ORTHO05D000110 3.2e-10 70.1 208 27.9
Lsat_1_v5_gn_5_60441 Lactuca sativa HOM05D008711 ORTHO05D010134 9.3e-10 68.6 92 37.0
Lsat_1_v5_gn_5_46440 Lactuca sativa HOM05D008975 ORTHO05D010134 1.6e-09 67.8 165 27.3
HanXRQChr01g0029511 Helianthus annuus HOM05D008711 ORTHO05D010134 2.1e-09 67.4 67 50.7
Lsat_1_v5_gn_8_27541 Lactuca sativa HOM05D000374 ORTHO05D000238 2.7e-09 67.0 147 30.6
HanXRQChr03g0073811 Helianthus annuus HOM05D008711 ORTHO05D010134 3.5e-09 66.6 106 43.4
Lsat_1_v5_gn_9_114661 Lactuca sativa HOM05D008975 ORTHO05D010134 6.0e-09 65.9 144 29.2
COL.COLO4_10047 Corchorus olitorius HOM05D014433 ORTHO05D000110 1.0e-08 65.1 169 27.8
COL.COLO4_10333 Corchorus olitorius HOM05D014433 ORTHO05D000110 1.3e-08 64.7 169 27.2
Lsat_1_v5_gn_1_82100 Lactuca sativa HOM05D008975 ORTHO05D010134 1.3e-08 64.7 207 26.6
Lsat_1_v5_gn_7_44701 Lactuca sativa HOM05D008959 ORTHO05D000110 3.3e-07 60.1 227 26.9
Lsat_1_v5_gn_3_5821 Lactuca sativa HOM05D008959 ORTHO05D000110 5.7e-07 59.3 227 26.9
Lsat_1_v5_gn_6_25761 Lactuca sativa HOM05D008959 ORTHO05D000110 5.7e-07 59.3 227 26.9
Lsat_1_v5_gn_6_44661 Lactuca sativa HOM05D008959 ORTHO05D000110 7.4e-07 58.9 227 26.9
Lsat_1_v5_gn_5_49621 Lactuca sativa HOM05D008975 ORTHO05D010134 1.3e-06 58.2 144 27.1
Lsat_1_v5_gn_7_39260 Lactuca sativa HOM05D008959 ORTHO05D000110 1.3e-06 58.2 227 27.3
COL.COLO4_05846 Corchorus olitorius HOM05D014433 ORTHO05D000110 2.8e-06 57.0 150 26.7
Lsat_1_v5_gn_3_2021 Lactuca sativa HOM05D008959 ORTHO05D000110 2.8e-06 57.0 227 26.4
Lsat_1_v5_gn_7_64800 Lactuca sativa HOM05D008959 ORTHO05D000110 2.8e-06 57.0 227 26.4


User provided reference genes

Program Settings