Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 2.3e-168 595.5 302 100.0
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 9.0e-149 530.4 284 94.4
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 4.2e-146 521.5 288 90.6
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 2.1e-137 492.7 302 82.5
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 2.5e-135 485.7 298 81.5
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 3.3e-135 485.3 306 80.4
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 4.3e-135 485.0 300 81.7
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 3.7e-134 481.9 311 79.4
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 1.1e-133 480.3 304 81.9
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.8e-133 479.6 295 82.0
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 4.1e-133 478.4 278 85.3
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 5.3e-133 478.0 302 82.1
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.5e-132 476.5 309 80.6
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 3.4e-132 475.3 300 82.7
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 3.4e-132 475.3 298 81.2
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 3.4e-132 475.3 297 82.2
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 4.5e-132 474.9 300 81.3
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.7e-131 473.0 302 80.8
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 2.2e-131 472.6 297 80.8
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 2.2e-131 472.6 304 79.6
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.2e-131 472.6 293 81.9
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 3.8e-131 471.9 298 80.2
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 5.0e-131 471.5 302 79.5
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 5.0e-131 471.5 302 79.8
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 8.4e-131 470.7 296 80.7
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.2e-130 468.8 280 85.4
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.2e-130 468.8 302 79.5
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 4.2e-130 468.4 295 80.7
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 5.5e-130 468.0 296 80.4
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 5.5e-130 468.0 303 79.5
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 5.5e-130 468.0 307 78.5
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 7.1e-130 467.6 297 79.8
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 9.3e-130 467.2 298 80.9
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 1.2e-129 466.8 298 79.9
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.6e-129 466.5 298 80.2
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.6e-129 466.5 296 80.4
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.1e-129 466.1 302 78.5
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 2.1e-129 466.1 296 80.7
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 2.1e-129 466.1 297 79.5
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 2.1e-129 466.1 297 79.8
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 2.7e-129 465.7 292 80.8
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 2.7e-129 465.7 302 78.1
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 3.5e-129 465.3 298 78.5
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 3.5e-129 465.3 280 84.6
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 3.5e-129 465.3 296 78.0
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 7.9e-129 464.2 290 80.0
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.0e-128 463.8 298 79.9
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 1.3e-128 463.4 267 84.3
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 1.3e-128 463.4 298 78.5
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.3e-128 463.4 303 78.2
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.8e-128 463.0 301 76.7
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 1.8e-128 463.0 278 82.7
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 2.3e-128 462.6 286 82.5
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 2.3e-128 462.6 291 80.8
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 3.0e-128 462.2 290 79.3
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.0e-128 462.2 280 82.5
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 3.9e-128 461.8 297 78.1
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 3.9e-128 461.8 278 83.5
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 5.1e-128 461.5 296 79.1
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 6.7e-128 461.1 288 79.5
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 6.7e-128 461.1 288 79.5
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 6.7e-128 461.1 288 79.5
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 6.7e-128 461.1 295 76.6
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 6.7e-128 461.1 291 78.7
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 6.7e-128 461.1 286 82.2
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 6.7e-128 461.1 298 78.9
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 6.7e-128 461.1 302 79.5
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 1.1e-127 460.3 299 79.3
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.1e-127 460.3 300 79.3
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 1.5e-127 459.9 293 80.9
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.9e-127 459.5 278 83.5
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.9e-127 459.5 299 79.3
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 2.5e-127 459.1 280 82.5
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 3.3e-127 458.8 291 78.0
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 3.3e-127 458.8 288 79.2
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 3.3e-127 458.8 280 82.1
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 3.3e-127 458.8 291 80.8
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 4.3e-127 458.4 307 77.9
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 4.3e-127 458.4 304 77.3
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 5.7e-127 458.0 304 77.0
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 5.7e-127 458.0 303 77.6
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 9.7e-127 457.2 280 81.4
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 9.7e-127 457.2 289 79.6
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.3e-126 456.8 298 78.9
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 1.3e-126 456.8 298 78.2
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 2.2e-126 456.1 298 77.2
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 2.2e-126 456.1 293 79.9
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 2.8e-126 455.7 280 81.4
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 3.7e-126 455.3 298 77.5
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 4.8e-126 454.9 296 79.4
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 1.1e-125 453.8 309 76.1
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 1.4e-125 453.4 289 78.9
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 1.8e-125 453.0 275 81.5
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 3.1e-125 452.2 295 77.6
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 4.1e-125 451.8 287 79.8
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 4.1e-125 451.8 298 77.5
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 9.0e-125 450.7 291 78.0
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.5e-124 449.9 287 79.4
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.4e-124 448.7 304 77.6
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.4e-124 448.7 278 82.0
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 4.5e-124 448.4 292 77.7
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 1.3e-123 446.8 280 79.3
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 1.7e-123 446.4 291 78.4
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 2.2e-123 446.0 297 77.1
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 3.8e-123 445.3 293 78.8
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.1e-122 443.7 283 79.5
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 7.2e-122 441.0 311 73.3
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 1.2e-121 440.3 297 76.1
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 3.6e-121 438.7 294 77.6
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.5e-119 433.3 326 71.5
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 2.0e-119 433.0 313 73.5
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 2.5e-119 432.6 280 80.4
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 7.4e-119 431.0 290 77.2
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 1.7e-118 429.9 299 74.9
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 1.7e-118 429.9 300 73.3
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 4.8e-118 428.3 279 78.9
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 8.2e-118 427.6 273 79.5
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.4e-117 426.8 296 72.6
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 7.7e-116 421.0 278 80.6
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 7.2e-114 414.5 254 82.3
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 4.7e-113 411.8 360 63.6
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.1e-111 407.1 221 90.0
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 1.3e-110 403.7 221 87.8
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.8e-109 399.8 278 75.5
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.1e-109 399.1 292 66.4
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 4.1e-109 398.7 280 74.3
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 4.5e-108 395.2 261 77.0
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 8.5e-107 391.0 250 75.2
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 1.1e-106 390.6 278 71.9
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.2e-106 389.0 218 86.7
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.2e-106 389.0 218 86.7
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 2.6e-103 379.4 251 72.5
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 3.7e-102 375.6 274 67.5
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 6.5e-99 364.8 200 87.5
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 5.5e-98 361.7 250 68.4
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.6e-95 352.8 308 64.0
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 3.5e-92 342.4 216 80.1
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 2.2e-91 339.7 243 74.1
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 6.1e-89 331.6 182 90.1
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 1.4e-88 330.5 182 87.9
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 2.8e-86 322.8 208 78.8
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 6.1e-81 305.1 174 86.8
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 4.9e-78 295.4 221 73.3
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 4.7e-73 278.9 190 74.2
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 4.0e-72 275.8 152 90.1
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 7.3e-66 255.0 194 67.0
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.9e-61 240.4 146 80.1
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 8.6e-59 231.5 209 60.8
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 1.5e-47 194.1 119 75.6
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.4e-47 193.0 259 46.3
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 9.3e-45 184.9 158 62.0
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 1.7e-43 180.6 136 69.1
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 2.5e-42 176.8 177 57.6
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 1.8e-40 170.6 105 76.2
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 2.7e-36 156.8 86 84.9
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 3.9e-35 152.9 95 75.8
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 7.6e-31 138.7 307 33.2
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.1e-29 134.8 82 79.3
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 1.0e-27 128.3 196 44.9
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 3.7e-25 119.8 170 43.5
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 1.5e-23 114.4 65 84.6
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 1.5e-23 114.4 65 84.6
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 1.3e-19 101.3 85 65.9
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 4.1e-16 89.7 53 79.2
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 1.2e-15 88.2 158 39.2
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 8.4e-14 82.0 79 54.4
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-13 80.5 85 50.6
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 7.9e-12 75.5 92 47.8
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 3.9e-11 73.2 103 43.7
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.9e-11 73.2 64 67.2
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.9e-11 73.2 64 67.2
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 5.7e-10 69.3 60 58.3
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 7.4e-10 68.9 110 39.1
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 3.7e-09 66.6 76 56.6
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.1e-08 65.1 42 81.0
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 2.0e-07 60.8 64 60.9
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 2.0e-07 60.8 57 50.9
MCO17G054 Micromonas commoda HOM05D003815 ORTHO05D270498 1.3e-06 58.2 72 38.9
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 2.2e-06 57.4 42 69.0
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.2e-06 57.4 81 44.4
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 6.5e-06 55.8 38 71.1


User provided reference genes

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