Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 2.1e-85 318.9 157 100.0
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 1.2e-51 206.8 106 95.3
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 3.4e-43 178.7 106 82.1
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 2.7e-40 169.1 105 75.2
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 3.5e-35 152.1 102 68.6
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 1.0e-34 150.6 105 67.6
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 2.2e-34 149.4 105 61.9
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 1.1e-33 147.1 102 65.7
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.5e-33 146.7 101 64.4
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 1.5e-33 146.7 101 64.4
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 1.9e-33 146.4 106 64.2
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 7.2e-33 144.4 98 65.3
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.2e-32 143.7 106 67.0
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 2.7e-32 142.5 98 64.3
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 2.7e-32 142.5 106 61.3
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 2.7e-32 142.5 103 67.0
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 3.6e-32 142.1 103 64.1
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 4.7e-32 141.7 105 63.8
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 8.0e-32 141.0 90 72.2
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 1.4e-31 140.2 93 68.8
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.4e-31 140.2 101 63.4
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.4e-31 140.2 107 62.6
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 1.8e-31 139.8 113 61.1
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 2.3e-31 139.4 104 63.5
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 2.3e-31 139.4 104 63.5
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 2.3e-31 139.4 100 66.0
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 5.2e-31 138.3 101 63.4
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 5.2e-31 138.3 101 63.4
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 6.7e-31 137.9 105 61.0
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 6.7e-31 137.9 103 64.1
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 8.8e-31 137.5 104 64.4
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 8.8e-31 137.5 108 63.0
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.2e-30 137.1 102 62.7
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 1.2e-30 137.1 103 62.1
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 1.5e-30 136.7 104 62.5
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 2.6e-30 136.0 106 60.4
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 2.6e-30 136.0 106 60.4
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 2.6e-30 136.0 107 61.7
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 3.3e-30 135.6 101 62.4
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 3.3e-30 135.6 95 66.3
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 3.3e-30 135.6 108 57.4
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 3.3e-30 135.6 108 57.4
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 4.4e-30 135.2 91 64.8
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 5.7e-30 134.8 95 66.3
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 5.7e-30 134.8 104 61.5
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 9.7e-30 134.0 93 64.5
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 9.7e-30 134.0 107 60.7
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 1.3e-29 133.7 107 57.0
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 1.3e-29 133.7 94 67.0
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 1.3e-29 133.7 99 60.6
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 1.7e-29 133.3 100 62.0
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 2.2e-29 132.9 104 61.5
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 2.8e-29 132.5 91 65.9
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 2.8e-29 132.5 107 60.7
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 3.7e-29 132.1 104 60.6
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 4.8e-29 131.7 101 63.4
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 8.2e-29 131.0 114 57.0
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 1.1e-28 130.6 97 62.9
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 1.1e-28 130.6 89 67.4
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 1.1e-28 130.6 102 62.7
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 1.4e-28 130.2 101 59.4
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 1.8e-28 129.8 91 64.8
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 1.8e-28 129.8 88 65.9
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 1.8e-28 129.8 108 56.5
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 1.8e-28 129.8 104 56.7
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 3.1e-28 129.0 91 64.8
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 3.1e-28 129.0 106 59.4
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 3.1e-28 129.0 114 54.4
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 4.1e-28 128.6 109 56.9
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 4.1e-28 128.6 104 61.5
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 5.3e-28 128.3 101 58.4
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 5.3e-28 128.3 92 67.4
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 1.2e-27 127.1 91 63.7
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 1.6e-27 126.7 91 62.6
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 3.5e-27 125.6 89 64.0
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 4.5e-27 125.2 95 57.9
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 4.5e-27 125.2 89 62.9
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 5.9e-27 124.8 101 58.4
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 5.9e-27 124.8 101 61.4
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 5.9e-27 124.8 101 61.4
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.3e-26 123.6 108 54.6
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 2.9e-26 122.5 105 56.2
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 8.5e-26 120.9 106 54.7
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 1.5e-25 120.2 101 59.4
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 3.2e-25 119.0 101 58.4
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 2.1e-24 116.3 101 57.4
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 6.8e-23 111.3 92 57.6
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 8.8e-23 110.9 93 53.8
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 4.4e-22 108.6 86 59.3
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 1.1e-20 104.0 101 52.5
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 4.1e-20 102.1 64 75.0
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 2.0e-19 99.8 93 53.8
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 1.3e-18 97.1 63 69.8
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 2.9e-18 95.9 84 53.6
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 3.8e-18 95.5 94 51.1
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 6.5e-18 94.7 103 45.6
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 8.6e-18 94.4 87 54.0
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 1.1e-17 94.0 63 66.7
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 1.1e-17 94.0 95 48.4
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 1.1e-17 94.0 98 48.0
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 3.3e-17 92.4 63 69.8
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 1.2e-16 90.5 105 46.7
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 2.1e-16 89.7 56 71.4
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 2.8e-16 89.4 63 63.5
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-16 89.0 98 48.0
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 4.7e-16 88.6 66 62.1
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 1.4e-15 87.0 66 60.6
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 1.4e-15 87.0 85 50.6
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 3.0e-15 85.9 69 59.4
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 2.6e-14 82.8 67 59.7
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 3.4e-14 82.4 67 62.7
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 7.5e-14 81.3 89 48.3
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 7.5e-14 81.3 51 76.5
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 7.8e-11 71.2 63 57.1
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 1.7e-10 70.1 53 62.3
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 8.6e-10 67.8 51 58.8
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 1.5e-09 67.0 87 41.4
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 6.1e-08 61.6 122 33.6


User provided reference genes

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