Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0327851 Helianthus annuus HOM05D008204 ORTHO05D010378 3.2e-63 245.0 128 100.0
CAN.G2446.2 Capsicum annuum HOM05D008204 ORTHO05D010378 1.7e-24 116.3 69 94.2
CAN.G2792.2 Capsicum annuum HOM05D008204 ORTHO05D010378 1.7e-24 116.3 69 94.2
DCAR_032454 Daucus carota HOM05D008204 ORTHO05D010378 1.7e-24 116.3 69 94.2
HanXRQChr16g0504421 Helianthus annuus HOM05D008204 ORTHO05D010378 1.7e-24 116.3 69 94.2
HanXRQMTg0579141 Helianthus annuus HOM05D008204 ORTHO05D010378 1.7e-24 116.3 69 94.2
Nn1g09977 Nelumbo nucifera HOM05D008204 ORTHO05D010378 8.5e-24 114.0 69 92.8
Nn1g10041 Nelumbo nucifera HOM05D008204 ORTHO05D010378 8.5e-24 114.0 69 92.8
RcHm_v2.0_MTg0498341 Rosa chinensis HOM05D008204 ORTHO05D010378 8.5e-24 114.0 69 92.8
ATMG00650 Arabidopsis thaliana HOM05D008204 ORTHO05D010378 4.2e-23 111.7 69 91.3
BraSC48t46233Z Brassica rapa HOM05D008204 ORTHO05D010378 4.2e-23 111.7 69 91.3
BraSC48t46321Z Brassica rapa HOM05D008204 ORTHO05D010378 4.2e-23 111.7 69 91.3
CARHR283010 Cardamine hirsuta HOM05D008204 ORTHO05D010378 4.2e-23 111.7 69 91.3
Thhalv10023053m.g Eutrema salsugineum HOM05D008204 ORTHO05D010378 4.2e-23 111.7 69 91.3
Gorai.001G160700 Gossypium raimondii HOM05D008204 ORTHO05D010378 4.2e-23 111.7 69 91.3
Glyma.17G186100 Glycine max HOM05D008204 ORTHO05D010378 7.2e-23 110.9 69 91.3
Lalb_Chr00c21g0405851 Lupinus albus HOM05D008204 ORTHO05D010378 7.2e-23 110.9 69 91.3
Lalb_Chr00c24g0407001 Lupinus albus HOM05D008204 ORTHO05D010378 7.2e-23 110.9 69 91.3
TPR.G39971 Trifolium pratense HOM05D008204 ORTHO05D010378 7.2e-23 110.9 69 91.3
C01p34800 Brassica napus HOM05D008204 ORTHO05D010378 1.2e-22 110.2 69 89.9
BolC1t03448H Brassica oleracea HOM05D008204 ORTHO05D010378 1.2e-22 110.2 69 89.9
SHI54418 Sapria himalayana HOM05D008204 ORTHO05D010378 2.1e-22 109.4 69 89.9
HanXRQChr07g0188981 Helianthus annuus HOM05D008204 ORTHO05D010378 3.6e-22 108.6 69 88.4
SHI51809 Sapria himalayana HOM05D008204 ORTHO05D010378 3.6e-22 108.6 64 93.8
LjContig00439g0017375 Lotus japonicus HOM05D008204 ORTHO05D010378 8.0e-22 107.5 64 93.8
Aqoxy1G02968 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 1.4e-21 106.7 63 93.7
Aqoxy23s009 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 1.4e-21 106.7 63 93.7
Dinv06665 Davidia involucrata HOM05D008204 ORTHO05D010378 1.4e-21 106.7 63 93.7
Lsat_1_v5_gn_0_35040 Lactuca sativa HOM05D008204 ORTHO05D010378 1.8e-21 106.3 62 95.2
arahy.Tifrunner.gnm1.ann1.13YUNC Arachis hypogaea HOM05D008204 ORTHO05D010378 2.3e-21 105.9 63 93.7
arahy.Tifrunner.gnm1.ann1.4CE1ET Arachis hypogaea HOM05D008204 ORTHO05D010378 2.3e-21 105.9 63 93.7
arahy.Tifrunner.gnm1.ann1.CN6S56 Arachis hypogaea HOM05D008204 ORTHO05D010378 2.3e-21 105.9 63 93.7
arahy.Tifrunner.gnm1.ann1.TNUC9A Arachis hypogaea HOM05D008204 ORTHO05D010378 2.3e-21 105.9 63 93.7
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 2.3e-21 105.9 63 93.7
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 3.0e-21 105.5 68 86.8
Nitab4.5_0012599g0060 Nicotiana tabacum HOM05D008204 ORTHO05D010378 5.2e-21 104.8 62 93.5
Aqoxy12s023 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 8.8e-21 104.0 62 93.5
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 8.8e-21 104.0 62 93.5
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 8.8e-21 104.0 62 93.5
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 8.8e-21 104.0 62 93.5
Nitab4.5_0010333g0030 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.5e-20 103.2 62 91.9
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.5e-20 103.2 62 93.5
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 2.6e-20 102.4 63 90.5
Potri.007G061661 Populus trichocarpa HOM05D008204 ORTHO05D010378 2.2e-19 99.4 69 84.1
Potri.007G062622 Populus trichocarpa HOM05D008204 ORTHO05D010378 2.2e-19 99.4 69 84.1
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 4.8e-19 98.2 69 76.8
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 1.1e-18 97.1 66 84.8
Ah.10g028140 Amaranthus hybridus HOM05D008204 ORTHO05D010378 4.1e-18 95.1 63 87.3
SHI19534 Sapria himalayana HOM05D007533 ORTHO05D010378 2.9e-16 89.0 56 87.5
CANSAT16G0035 Cannabis sativa HOM05D008204 ORTHO05D010378 3.8e-16 88.6 69 79.7
Sed0011989 Sechium edule HOM05D008204 ORTHO05D010378 3.8e-16 88.6 69 79.7
Sed0024014 Sechium edule HOM05D008204 ORTHO05D010378 3.8e-16 88.6 69 79.7
Lsat_1_v5_gn_5_43061 Lactuca sativa HOM05D008204 ORTHO05D010378 4.2e-15 85.1 49 95.9
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 4.2e-15 85.1 49 95.9
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 1.2e-14 83.6 49 93.9
SEGI_24171 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 2.1e-14 82.8 69 75.4
HanXRQChr07g0189011 Helianthus annuus HOM05D008204 ORTHO05D010378 3.6e-14 82.0 49 91.8
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.6e-12 75.9 44 90.9
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 2.8e-11 72.4 42 95.2
Aa31csc1168G40 Aethionema arabicum HOM05D008204 ORTHO05D010378 1.4e-10 70.1 42 92.9
SHI41393 Sapria himalayana HOM05D008204 ORTHO05D010378 5.4e-10 68.2 42 88.1
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 9.1e-10 67.4 54 74.1
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 3.5e-09 65.5 42 88.1
SEGI_26273 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 1.0e-08 63.9 57 70.2
SHI07475 Sapria himalayana HOM05D008204 ORTHO05D010378 2.9e-08 62.4 56 67.9
Nitab4.5_0001152g0280 Nicotiana tabacum HOM05D008204 ORTHO05D016167 3.6e-06 55.5 44 70.5


User provided reference genes

Program Settings