Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0327841 Helianthus annuus HOM05D002965 ORTHO05D010536 8.0e-32 139.8 71 100.0
HanXRQChr05g0134431 Helianthus annuus HOM05D002965 ORTHO05D010536 2.9e-29 131.3 71 95.8
HanXRQChr07g0188971 Helianthus annuus HOM05D002965 ORTHO05D010536 4.1e-28 127.5 71 93.0
HanXRQMTg0579151 Helianthus annuus HOM05D002965 ORTHO05D010536 2.7e-27 124.8 71 88.7
HanXRQChr10g0297161 Helianthus annuus HOM05D002965 ORTHO05D010536 4.6e-27 124.0 71 87.3
ECA003G0005 Erigeron canadensis HOM05D002965 ORTHO05D000580 1.2e-19 99.4 71 71.8
ECA039G0005 Erigeron canadensis HOM05D002965 ORTHO05D010536 1.2e-19 99.4 71 71.8
HanXRQChr02g0035251 Helianthus annuus HOM05D002965 ORTHO05D010536 9.9e-14 79.7 46 84.8
Gohir.D06G053851 Gossypium hirsutum HOM05D002965 ORTHO05D010536 1.1e-12 76.3 62 59.7
Lj6A7T8 Lonicera japonica HOM05D002965 ORTHO05D010536 4.1e-12 74.3 70 55.7
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 3.5e-11 71.2 63 52.4
Solyc00g500226.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 5.1e-10 67.4 61 54.1
Solyc00g500262.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 5.1e-10 67.4 61 54.1
BcaC05g26887 Brassica carinata HOM05D002965 ORTHO05D010536 8.6e-10 66.6 71 50.7
BNapus_Darmor_BZH_scaffold_234p00050 Brassica napus HOM05D002965 ORTHO05D010536 8.6e-10 66.6 71 50.7
BolSC28t60357H Brassica oleracea HOM05D002965 ORTHO05D010536 8.6e-10 66.6 71 50.7
BraSC48t46254Z Brassica rapa HOM05D002965 ORTHO05D010536 8.6e-10 66.6 71 50.7
Solyc06g074585.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 1.1e-09 66.2 61 54.1
Solyc00g500114.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 1.9e-09 65.5 60 55.0
PGSC0003DMG400010573 Solanum tuberosum HOM05D002965 ORTHO05D010536 1.9e-09 65.5 61 52.5
VMungo0251G1451 Vigna mungo HOM05D002965 ORTHO05D010536 2.5e-09 65.1 71 50.7
AL3G44420 Arabidopsis lyrata HOM05D002965 ORTHO05D010536 5.6e-09 63.9 61 52.5
AT2G07674 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 5.6e-09 63.9 61 52.5
ATMG01010 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 5.6e-09 63.9 61 52.5
Aqoxy3G01134 Aquilegia oxysepala HOM05D002965 ORTHO05D010536 1.6e-08 62.4 70 50.0
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 2.1e-08 62.0 63 52.4
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 2.1e-08 62.0 56 53.6
Potri.007G062262 Populus trichocarpa HOM05D002965 ORTHO05D010536 2.8e-08 61.6 57 52.6
SabraMtG0009900 Salix brachista HOM05D002965 ORTHO05D010536 2.8e-08 61.6 57 52.6
Aa31csc1081G40 Aethionema arabicum HOM05D002965 ORTHO05D010536 1.1e-07 59.7 57 49.1
Hma1.2p1_0290F.1_g114710 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 1.1e-07 59.7 57 49.1
Hma1.2p1_0290F.1_g114715 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 1.1e-07 59.7 57 49.1
CARHR283260 Cardamine hirsuta HOM05D002965 ORTHO05D010536 1.4e-07 59.3 71 45.1
EL10Ac5g12181 Beta vulgaris HOM05D002965 ORTHO05D010536 2.4e-07 58.5 71 46.5
Glyma.17G186200 Glycine max HOM05D002965 ORTHO05D010536 3.1e-07 58.2 52 50.0
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 5.2e-07 57.4 63 49.2
Sopen11g012750 Solanum pennellii HOM05D002660 ORTHO05D003902 6.8e-07 57.0 56 50.0
Eucgr.I01860 Eucalyptus grandis HOM05D002965 ORTHO05D010536 8.9e-07 56.6 56 48.2
Solyc00g025300.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 8.9e-07 56.6 48 56.2
PGR028G0005 Punica granatum HOM05D002965 ORTHO05D010536 5.8e-06 53.9 50 54.0
PGR069G0002 Punica granatum HOM05D002965 ORTHO05D010536 5.8e-06 53.9 50 54.0
PGR069G0012 Punica granatum HOM05D002965 ORTHO05D010536 5.8e-06 53.9 50 54.0
PGR069G0018 Punica granatum HOM05D002965 ORTHO05D010536 5.8e-06 53.9 50 54.0
PGR071G0002 Punica granatum HOM05D002965 ORTHO05D010536 5.8e-06 53.9 50 54.0
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 9.9e-06 53.1 63 46.0


User provided reference genes

Program Settings