Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 8.1e-140 500.4 246 100.0
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 6.0e-119 431.0 247 87.9
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 5.1e-118 427.9 246 85.8
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 1.1e-115 420.2 244 87.3
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 4.4e-93 345.1 250 68.8
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 9.7e-93 344.0 253 67.6
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 6.3e-92 341.3 250 66.8
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 7.0e-91 337.8 250 66.0
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 1.6e-90 336.7 250 66.4
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 2.0e-90 336.3 250 66.8
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 3.8e-89 332.0 250 66.0
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 6.5e-89 331.3 250 65.6
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 1.5e-88 330.1 251 65.7
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 1.9e-88 329.7 250 65.2
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 5.5e-88 328.2 251 63.3
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 2.1e-87 326.2 250 65.2
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 1.4e-86 323.6 235 66.8
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 3.0e-86 322.4 250 64.4
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 4.0e-86 322.0 250 64.4
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 8.8e-86 320.9 248 63.7
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 8.8e-86 320.9 250 63.6
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 9.7e-85 317.4 250 64.0
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 1.7e-84 316.6 250 63.6
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 2.2e-84 316.2 248 64.1
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 6.3e-84 314.7 255 62.0
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 6.3e-84 314.7 233 67.4
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 2.4e-83 312.8 247 63.6
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 2.4e-83 312.8 245 62.4
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 7.0e-83 311.2 250 60.4
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 7.0e-83 311.2 249 60.6
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 2.0e-82 309.7 250 61.6
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 2.0e-82 309.7 250 62.0
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 3.5e-82 308.9 250 60.8
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 4.5e-82 308.5 250 62.0
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 7.7e-82 307.8 250 61.2
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 1.0e-81 307.4 250 60.4
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 1.3e-81 307.0 250 61.2
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 2.9e-81 305.8 314 54.8
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 6.5e-81 304.7 251 60.2
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 1.1e-80 303.9 222 64.9
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 1.5e-80 303.5 244 62.7
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 5.5e-80 301.6 250 61.2
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 1.2e-79 300.4 246 58.9
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 1.2e-79 300.4 224 62.9
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 1.6e-79 300.1 250 60.8
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 6.1e-79 298.1 250 61.6
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 6.1e-79 298.1 238 59.7
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 8.0e-79 297.7 245 61.2
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 8.0e-79 297.7 220 65.0
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 2.3e-78 296.2 246 59.8
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 3.0e-78 295.8 238 60.5
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 4.0e-78 295.4 250 60.4
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 5.2e-78 295.0 230 62.2
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 8.8e-78 294.3 250 60.8
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 1.2e-77 293.9 250 58.0
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 1.5e-77 293.5 248 60.5
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 2.6e-77 292.7 250 60.4
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 2.6e-77 292.7 249 57.8
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 4.4e-77 292.0 250 57.2
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 5.7e-77 291.6 248 60.5
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 7.5e-77 291.2 252 60.3
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 1.3e-76 290.4 226 64.2
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 2.8e-76 289.3 238 60.1
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 3.7e-76 288.9 257 59.1
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 3.7e-76 288.9 277 52.7
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 3.7e-76 288.9 255 58.4
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 6.3e-76 288.1 238 58.4
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 8.3e-76 287.7 250 60.0
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 1.1e-75 287.3 249 57.8
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 1.4e-75 287.0 250 58.8
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 1.8e-75 286.6 241 59.3
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 1.8e-75 286.6 241 59.3
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 3.1e-75 285.8 253 59.3
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 3.1e-75 285.8 252 57.5
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 5.4e-75 285.0 250 58.0
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 9.1e-75 284.3 248 58.1
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 2.2e-73 279.6 301 49.5
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 2.2e-73 279.6 260 57.7
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 2.2e-73 279.6 203 63.1
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 2.9e-73 279.3 235 58.3
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 1.5e-72 276.9 232 58.2
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 1.5e-72 276.9 257 55.6
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 1.9e-72 276.6 236 58.1
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 5.5e-72 275.0 220 59.5
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 1.6e-71 273.5 189 68.3
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 3.6e-71 272.3 233 58.8
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 6.8e-70 268.1 187 66.8
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 2.2e-68 263.1 300 50.7
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 4.9e-68 261.9 212 58.0
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 1.8e-67 260.0 235 56.2
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 2.3e-65 253.1 187 64.2
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 2.9e-65 252.7 214 58.9
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 1.5e-64 250.4 198 60.1
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 1.9e-64 250.0 236 52.5
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 4.3e-64 248.8 244 50.8
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 1.2e-63 247.3 250 53.6
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 2.0e-61 240.0 244 50.4
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 5.7e-61 238.4 247 51.0
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 2.9e-60 236.1 224 51.8
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.8e-55 219.5 206 54.9
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 8.9e-54 214.5 152 63.2
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 4.7e-47 192.2 167 56.9
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 2.8e-39 166.4 221 42.5
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 2.3e-33 146.7 120 59.2
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 5.4e-27 125.6 135 52.6
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 2.1e-26 123.6 181 38.7
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 4.8e-23 112.5 226 35.4
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 1.1e-22 111.3 226 35.0
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 9.9e-21 104.8 179 36.3
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 3.8e-20 102.8 206 31.1
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 1.9e-19 100.5 213 31.0
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 3.0e-17 93.2 166 34.9
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 6.2e-15 85.5 77 53.2
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 4.5e-13 79.3 126 42.9
TPR.G24733 Trifolium pratense HOM05D007231 ORTHO05D009024 4.2e-11 72.8 55 61.8
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 3.0e-09 66.6 67 52.2
HanXRQChr09g0240321 Helianthus annuus HOM05D003462 ORTHO05D003946 2.1e-07 60.5 55 63.6
TPR.G17639 Trifolium pratense HOM05D007231 ORTHO05D009024 2.4e-06 57.0 43 60.5
TPR.G23952 Trifolium pratense HOM05D007231 ORTHO05D009024 2.4e-06 57.0 43 60.5


User provided reference genes

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