Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 0.0e+00 1406.3 744 100.0
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 6.4e-188 661.8 799 53.6
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 4.6e-170 602.4 795 52.2
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.6e-77 295.0 817 34.5
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 1.8e-73 281.6 796 34.2
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 9.8e-64 249.2 847 31.6
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 6.6e-60 236.5 865 31.9
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 1.6e-58 231.9 821 30.6
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 8.1e-58 229.6 787 32.1
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 3.1e-57 227.6 801 32.0
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 1.5e-56 225.3 763 31.1
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 7.6e-56 223.0 829 30.8
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 5.1e-52 210.3 831 30.8
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.1e-49 202.6 814 29.7
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 1.1e-46 192.6 826 29.7
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 1.4e-46 192.2 794 29.6
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 1.9e-46 191.8 805 30.7
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 7.1e-46 189.9 822 29.4
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.1e-45 188.3 826 28.0
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 6.0e-45 186.8 810 28.0
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 1.3e-44 185.7 793 29.0
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 1.7e-44 185.3 871 27.8
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.9e-44 184.1 827 30.1
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 3.9e-44 184.1 880 28.9
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 2.5e-43 181.4 800 29.2
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 4.3e-43 180.6 892 27.4
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 5.6e-43 180.3 786 29.6
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 1.3e-42 179.1 780 29.0
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 3.1e-41 174.5 813 28.5
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 2.0e-40 171.8 808 30.2
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 4.5e-40 170.6 814 29.1
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 2.9e-39 167.9 839 27.7
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.8e-39 167.5 837 29.0
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.9e-38 165.2 783 28.4
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 4.2e-38 164.1 931 27.1
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.2e-37 162.5 815 27.9
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.1e-37 161.8 825 28.7
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 2.7e-37 161.4 784 28.8
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 2.7e-37 161.4 959 27.3
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 3.5e-37 161.0 798 28.2
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 3.5e-37 161.0 769 28.7
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 6.0e-37 160.2 768 28.1
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 6.6e-36 156.8 796 29.1
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 4.3e-35 154.1 791 28.1
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 9.6e-35 152.9 802 28.6
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 2.1e-34 151.8 818 26.5
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 2.8e-34 151.4 828 26.9
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 3.6e-34 151.0 775 28.5
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 4.8e-34 150.6 837 27.5
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 6.2e-34 150.2 789 27.4
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 7.6e-32 143.3 759 27.0
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 7.6e-32 143.3 829 26.8
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 7.6e-32 143.3 826 26.5
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 3.8e-31 141.0 857 26.5
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 7.1e-30 136.7 242 40.5
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 1.6e-29 135.6 823 27.2
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 2.7e-29 134.8 758 26.6
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 4.6e-29 134.0 849 28.0
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 7.9e-29 133.3 283 37.5
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 1.0e-28 132.9 845 27.6
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 1.1e-27 129.4 818 26.5
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 1.1e-27 129.4 869 25.7
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 1.9e-27 128.6 826 26.5
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 4.3e-27 127.5 819 25.4
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 7.4e-27 126.7 807 26.0
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 2.8e-26 124.8 808 25.9
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 2.8e-26 124.8 877 26.1
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 2.8e-26 124.8 190 43.7
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 3.1e-25 121.3 138 50.7
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 6.9e-25 120.2 730 25.9
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 5.8e-24 117.1 873 25.2
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 2.2e-23 115.2 790 25.7
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 2.2e-23 115.2 872 25.3
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 3.8e-23 114.4 872 25.1
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 4.9e-23 114.0 766 26.2
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 6.5e-23 113.6 128 50.8
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.1e-22 112.8 425 29.2
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.9e-22 112.1 844 25.7
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 3.5e-21 107.8 468 28.2
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 2.3e-20 105.1 377 30.2
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 5.1e-20 104.0 152 46.7
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 1.1e-19 102.8 410 30.7
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 4.3e-19 100.9 221 34.8
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 2.8e-18 98.2 158 44.9
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 4.8e-18 97.4 516 27.1
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 6.3e-18 97.1 147 44.2
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 4.1e-17 94.4 149 44.3
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 1.5e-16 92.4 882 24.3
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 3.4e-16 91.3 71 62.0
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 5.9e-16 90.5 347 29.7
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 5.9e-16 90.5 102 48.0
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 1.9e-14 85.5 545 26.2
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 5.5e-14 84.0 845 24.3
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 5.5e-14 84.0 309 29.1
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 1.2e-13 82.8 120 44.2
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 3.6e-13 81.3 834 23.3
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.0e-12 79.7 115 41.7
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 1.5e-11 75.9 756 24.9
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 4.3e-11 74.3 749 23.8
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 5.7e-11 73.9 748 24.1
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 1.6e-10 72.4 133 41.4
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 1.1e-09 69.7 65 56.9
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 1.8e-09 68.9 736 23.0
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.8e-09 68.9 61 50.8
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 5.3e-09 67.4 167 32.3
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.2e-08 66.2 61 50.8
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.3e-07 62.8 59 52.5
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 1.7e-07 62.4 189 31.7
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.7e-07 62.4 59 52.5


User provided reference genes

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