Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0345g0573891 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr00c0702g0576871 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr02g0044951 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr07g0201011 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr08g0210301 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr10g0283491 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr10g0289211 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr10g0303781 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr11g0326761 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQCPg0579971 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-94 348.2 159 100.0
HanXRQChr10g0285321 Helianthus annuus HOM05D001033 ORTHO05D004888 2.8e-93 345.1 159 99.4
HanXRQChr02g0041501 Helianthus annuus HOM05D001033 ORTHO05D004888 3.7e-93 344.7 159 99.4
Lsat_1_v5_gn_3_99221 Lactuca sativa HOM05D001033 ORTHO05D004888 3.4e-91 338.2 157 97.5
Lsat_1_v5_gn_3_99300 Lactuca sativa HOM05D001033 ORTHO05D004888 3.4e-91 338.2 157 97.5
Lsat_1_v5_gn_4_40440 Lactuca sativa HOM05D001033 ORTHO05D004888 3.4e-91 338.2 157 97.5
Hma1.2p1_2223F.1_g317410 Hydrangea macrophylla HOM05D001033 ORTHO05D004888 2.2e-90 335.5 159 95.6
DCAR_032487 Daucus carota HOM05D001033 ORTHO05D004888 3.8e-90 334.7 159 95.0
Nn021s41548 Nelumbo nucifera HOM05D001033 ORTHO05D004888 3.8e-90 334.7 159 94.3
SalBow1G1376 Salvia bowleyana HOM05D001033 ORTHO05D004888 3.8e-90 334.7 159 95.6
Migut.D01427 Erythranthe guttata HOM05D001033 ORTHO05D004888 5.0e-90 334.3 159 95.6
RcHm_v2.0_CPg0502181 Rosa chinensis HOM05D001033 ORTHO05D004888 2.5e-89 332.0 159 94.3
Gohir.1Z049399 Gossypium hirsutum HOM05D001033 ORTHO05D004888 3.2e-89 331.6 159 94.3
Gohir.A09G102100 Gossypium hirsutum HOM05D001033 ORTHO05D004888 3.2e-89 331.6 159 94.3
COL.COLO4_03102 Corchorus olitorius HOM05D001033 ORTHO05D004888 4.2e-89 331.3 159 93.7
PSO548G0080 Papaver somniferum HOM05D001033 ORTHO05D004888 4.2e-89 331.3 159 93.7
Peaxi162Scf00334g00124 Petunia axillaris HOM05D001033 ORTHO05D004888 4.2e-89 331.3 159 95.6
QL93p0270_0002 Quercus lobata HOM05D001033 ORTHO05D004888 7.2e-89 330.5 158 93.7
Medtr4g035040 Medicago truncatula HOM05D001033 ORTHO05D004888 9.4e-89 330.1 159 92.5
Medtr7g021800 Medicago truncatula HOM05D001033 ORTHO05D004888 9.4e-89 330.1 159 92.5
CAN.G219.25 Capsicum annuum HOM05D001033 ORTHO05D004888 1.2e-88 329.7 159 95.0
Potri.013G163200 Populus trichocarpa HOM05D001033 ORTHO05D004888 1.2e-88 329.7 160 93.8
PGR111G0105 Punica granatum HOM05D001033 ORTHO05D004888 1.6e-88 329.3 159 93.7
Ah.10g027550 Amaranthus hybridus HOM05D001033 ORTHO05D004888 4.7e-88 327.8 159 93.7
Gohir.D03G073392 Gossypium hirsutum HOM05D001033 ORTHO05D004888 4.7e-88 327.8 159 93.1
unitig_91.g26504 Utricularia gibba HOM05D001033 ORTHO05D004888 4.7e-88 327.8 159 93.1
EL10As12g24022 Beta vulgaris HOM05D001033 ORTHO05D004888 1.8e-87 325.9 159 93.1
EL10As1g23049 Beta vulgaris HOM05D001033 ORTHO05D004888 1.8e-87 325.9 159 93.1
Solyc00g500061.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 2.3e-87 325.5 159 93.7
HanXRQChr15g0480701 Helianthus annuus HOM05D001033 ORTHO05D004888 8.8e-87 323.6 151 97.4
LjContig00318g0025596 Lotus japonicus HOM05D001033 ORTHO05D004888 1.1e-86 323.2 159 90.6
Lalb_Chr07g0192281 Lupinus albus HOM05D001033 ORTHO05D004888 2.6e-86 322.0 159 91.8
Lalb_Chr20g0115661 Lupinus albus HOM05D001033 ORTHO05D004888 5.7e-86 320.9 159 91.2
VMungo0498G0002 Vigna mungo HOM05D001033 ORTHO05D004888 1.7e-85 319.3 159 88.7
Lj4g0025955 Lotus japonicus HOM05D001033 ORTHO05D004888 4.8e-85 317.8 159 89.9
TWI36G0295 Tripterygium wilfordii HOM05D001033 ORTHO05D004888 6.3e-85 317.4 159 90.6
CAN.G170.11 Capsicum annuum HOM05D001033 ORTHO05D004888 8.2e-85 317.0 159 90.6
Phvul.011G056548 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 8.2e-85 317.0 159 88.1
CAN.G1183.6 Capsicum annuum HOM05D001033 ORTHO05D004888 1.8e-84 315.8 159 90.6
ATCG00420 Arabidopsis thaliana HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BNapus_Darmor_BZH_scaffold_253p00160 Brassica napus HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BNapus_Darmor_BZH_scaffold_287p00080 Brassica napus HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
C02p43470 Brassica napus HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
C09p40480 Brassica napus HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BolSC45t60947H Brassica oleracea HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BolSC46t61041H Brassica oleracea HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BolSC47t61103H Brassica oleracea HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BraSC25t45841Z Brassica rapa HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BraSC25t45874Z Brassica rapa HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BraSC58t46413Z Brassica rapa HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
BraSC58t46484Z Brassica rapa HOM05D001033 ORTHO05D004888 7.0e-84 313.9 159 89.3
Eucgr.A02747 Eucalyptus grandis HOM05D001033 ORTHO05D004888 3.5e-83 311.6 158 88.0
Medtr0002s0630 Medicago truncatula HOM05D001033 ORTHO05D004888 3.5e-83 311.6 158 88.0
Sc19g0006000 Simmondsia chinensis HOM05D001033 ORTHO05D004888 3.5e-83 311.6 157 90.4
AL2G21460 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 7.7e-83 310.5 159 88.1
BolSC45t60865H Brassica oleracea HOM05D001033 ORTHO05D004888 7.7e-83 310.5 159 88.7
CSS0012650 Camellia sinensis var. sinensis HOM05D001033 ORTHO05D004888 7.7e-83 310.5 159 91.2
BolSC29t60582H Brassica oleracea HOM05D001033 ORTHO05D004888 2.2e-82 308.9 159 88.1
CARHR282040 Cardamine hirsuta HOM05D001033 ORTHO05D004888 1.6e-80 302.8 154 89.0
A06p23250 Brassica napus HOM05D001033 ORTHO05D004888 2.1e-80 302.4 159 86.2
Sed0011576 Sechium edule HOM05D001033 ORTHO05D004888 2.0e-78 295.8 144 92.4
Sed0015951 Sechium edule HOM05D000680 ORTHO05D000738 2.0e-78 295.8 144 92.4
Sed0016230 Sechium edule HOM05D001033 ORTHO05D004888 2.0e-78 295.8 144 92.4
Ah.09g227310 Amaranthus hybridus HOM05D001033 ORTHO05D004888 3.3e-78 295.0 142 94.4
Gorai.001G177200 Gossypium raimondii HOM05D001033 ORTHO05D004888 3.7e-77 291.6 143 93.0
Sed0001763 Sechium edule HOM05D001033 ORTHO05D004888 4.8e-77 291.2 144 90.3
CAN.G91.9 Capsicum annuum HOM05D001033 ORTHO05D004888 6.3e-77 290.8 159 84.3
ATR0303G003 Amborella trichopoda HOM05D001033 ORTHO05D004888 3.5e-75 285.0 139 92.1
SEGI_35798 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 1.0e-74 283.5 159 81.1
Gohir.D01G102242 Gossypium hirsutum HOM05D001033 ORTHO05D004888 3.8e-74 281.6 159 83.6
Gohir.D07G155032 Gossypium hirsutum HOM05D001033 ORTHO05D004888 3.2e-73 278.5 139 91.4
AL2G20710 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 5.5e-73 277.7 159 81.1
BraA06t25427Z Brassica rapa HOM05D001033 ORTHO05D004888 8.8e-71 270.4 149 83.2
Solyc00g500142.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 7.5e-70 267.3 134 91.8
Sed0007524 Sechium edule HOM05D000680 ORTHO05D000738 8.3e-69 263.8 144 85.4
Thhalv10010993m.g Eutrema salsugineum HOM05D001033 ORTHO05D004888 5.4e-68 261.2 159 77.4
Gohir.D07G099350 Gossypium hirsutum HOM05D001033 ORTHO05D004888 9.1e-68 260.4 134 89.6
BolSC46t60994H Brassica oleracea HOM05D001033 ORTHO05D004888 7.7e-67 257.3 159 76.1
Nn071s42392 Nelumbo nucifera HOM05D001033 ORTHO05D004888 2.5e-65 252.3 151 79.5
BolC9t55818H Brassica oleracea HOM05D001033 ORTHO05D004888 1.6e-64 249.6 163 73.0
FAN19G1182 Fragaria x ananassa HOM05D001033 ORTHO05D004888 1.5e-62 243.0 159 74.2
Nitab4.5_0001841g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 2.8e-61 238.8 132 83.3
EL10As5g23626 Beta vulgaris HOM05D001033 ORTHO05D004888 1.8e-60 236.1 117 92.3
Gorai.005G187900 Gossypium raimondii HOM05D001033 ORTHO05D004888 9.1e-60 233.8 139 77.0
Lalb_Chr07g0192231 Lupinus albus HOM05D001033 ORTHO05D004888 1.3e-58 229.9 135 79.3
EL10Ac9g20715 Beta vulgaris HOM05D001033 ORTHO05D004888 1.9e-57 226.1 136 79.4
Gorai.001G107100 Gossypium raimondii HOM05D001033 ORTHO05D004888 8.0e-56 220.7 134 79.9
Lj2C1237T30 Lonicera japonica HOM05D001033 ORTHO05D004888 8.9e-55 217.2 100 97.0
Lj2C1239T58 Lonicera japonica HOM05D001033 ORTHO05D004888 8.9e-55 217.2 100 97.0
Lj2C1239T8 Lonicera japonica HOM05D001033 ORTHO05D004888 8.9e-55 217.2 100 97.0
Duzib192G0593 Durio zibethinus HOM05D001033 ORTHO05D004888 2.0e-54 216.1 109 90.8
EL10As15g24143 Beta vulgaris HOM05D001033 ORTHO05D004888 2.6e-54 215.7 157 68.8
Nitab4.5_0001761g0190 Nicotiana tabacum HOM05D001033 ORTHO05D004888 3.4e-54 215.3 112 88.4
vmacro22414 Vaccinium macrocarpon HOM05D001033 ORTHO05D004888 3.7e-53 211.8 105 94.3
C02p28640 Brassica napus HOM05D001033 ORTHO05D004888 1.1e-52 210.3 107 87.9
BolC2t08910H Brassica oleracea HOM05D001033 ORTHO05D004888 1.1e-52 210.3 107 87.9
Gohir.A09G102850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.4e-52 209.9 101 93.1
SMO086G0027 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-52 209.5 159 64.2
SMO086G0049 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-52 209.5 159 64.2
SMO233G0001 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 1.8e-52 209.5 159 64.2
Lsat_1_v5_gn_2_5601 Lactuca sativa HOM05D001033 ORTHO05D004888 1.6e-51 206.5 101 92.1
MBI06_g39081_MAGBIO Magnolia biondii HOM05D001033 ORTHO05D004888 1.3e-50 203.4 102 87.3
PSO302G0237 Papaver somniferum HOM05D001033 ORTHO05D004888 1.7e-50 203.0 100 91.0
SGA_v2.0_scaffold781G53594 Striga asiatica HOM05D001033 ORTHO05D004888 5.0e-50 201.4 162 66.7
Migut.D01354 Erythranthe guttata HOM05D001033 ORTHO05D004888 1.6e-48 196.4 97 92.8
Prupe.1G270900 Prunus persica HOM05D001033 ORTHO05D004888 2.8e-48 195.7 95 92.6
Nitab4.5_0005412g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 1.4e-47 193.4 111 80.2
Gorai.009G225200 Gossypium raimondii HOM05D001033 ORTHO05D004888 1.8e-47 193.0 109 85.3
BolC7t41665H Brassica oleracea HOM05D001033 ORTHO05D004888 1.3e-45 186.8 101 85.1
arahy.Tifrunner.gnm1.ann1.XVSZ20 Arachis hypogaea HOM05D001033 ORTHO05D004888 2.9e-45 185.7 115 75.7
Gohir.D05G218250 Gossypium hirsutum HOM05D001033 ORTHO05D004888 2.9e-45 185.7 109 80.7
SEGI_19633 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 3.7e-45 185.3 108 78.7
Nn1g03019 Nelumbo nucifera HOM05D001033 ORTHO05D004888 8.3e-45 184.1 150 68.7
PGSC0003DMG400002651 Solanum tuberosum HOM05D001033 ORTHO05D004888 2.7e-43 179.1 92 91.3
arahy.Tifrunner.gnm1.ann1.GNV4IL Arachis hypogaea HOM05D001033 ORTHO05D004888 1.0e-42 177.2 90 86.7
Oeu062837.1 Olea europaea HOM05D001033 ORTHO05D004888 2.3e-42 176.0 100 84.0
BolSC29t60459H Brassica oleracea HOM05D001033 ORTHO05D004888 5.6e-41 171.4 89 87.6
Peaxi162Scf00110g00002 Petunia axillaris HOM05D001033 ORTHO05D004888 1.2e-40 170.2 83 95.2
arahy.Tifrunner.gnm1.ann1.WN69VX Arachis hypogaea HOM05D001033 ORTHO05D004888 2.8e-40 169.1 83 92.8
DCAR_022590 Daucus carota HOM05D013260 ORTHO05D004888 2.8e-40 169.1 84 91.7
CAN.G386.17 Capsicum annuum HOM05D000388 ORTHO05D004888 3.6e-40 168.7 83 94.0
MELO3C029536.2 Cucumis melo HOM05D001033 ORTHO05D004888 4.0e-39 165.2 83 89.2
Haze_27536 Corylus avellana HOM05D001033 ORTHO05D004888 6.8e-39 164.5 83 89.2
unitig_87.g27944 Utricularia gibba HOM05D000388 ORTHO05D004888 1.2e-38 163.7 86 86.0
EL10Ac4g08633 Beta vulgaris HOM05D001033 ORTHO05D004888 4.4e-38 161.8 82 91.5
CAN.G100.48 Capsicum annuum HOM05D001033 ORTHO05D004888 9.2e-36 154.1 78 88.5
PGSC0003DMG400019224 Solanum tuberosum HOM05D001033 ORTHO05D004888 1.0e-34 150.6 92 76.1
Nitab4.5_0011099g0060 Nicotiana tabacum HOM05D001033 ORTHO05D004888 5.1e-34 148.3 78 87.2
SEGI_38193 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 2.5e-33 146.0 84 81.0
RcHm_v2.0_Chr7g0209391 Rosa chinensis HOM05D001033 ORTHO05D004888 4.3e-33 145.2 72 91.7
SEGI_08348 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 5.6e-33 144.8 99 70.7
HanXRQChr09g0274591 Helianthus annuus HOM05D001033 ORTHO05D004888 1.6e-32 143.3 65 100.0
SEGI_20198 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 2.1e-32 142.9 83 79.5
Lalb_Chr03g0039371 Lupinus albus HOM05D001033 ORTHO05D004888 5.2e-31 138.3 68 94.1
Sed0002731 Sechium edule HOM05D001033 ORTHO05D004888 1.3e-29 133.7 124 58.1
HanXRQChr17g0559251 Helianthus annuus HOM05D001033 ORTHO05D004888 5.4e-28 128.3 59 98.3
Gohir.A10G200850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 5.1e-26 121.7 59 89.8
Nn055s41942 Nelumbo nucifera HOM05D001033 ORTHO05D004888 1.9e-25 119.8 57 93.0
TAR633G0438 Trochodendron aralioides HOM05D001033 ORTHO05D004888 2.8e-24 115.9 58 86.2
ClCG07G012530 Citrullus lanatus HOM05D001033 ORTHO05D004888 1.1e-23 114.0 55 90.9
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-23 113.6 69 73.9
Lalb_Chr03g0030861 Lupinus albus HOM05D001033 ORTHO05D004888 1.5e-22 110.2 54 90.7
TPR.G37622 Trifolium pratense HOM05D001033 ORTHO05D004888 7.6e-22 107.8 50 96.0
Solyc01g056470.1 Solanum lycopersicum HOM05D000890 ORTHO05D004888 8.4e-21 104.4 99 53.5
BolSC35t60639H Brassica oleracea HOM05D001033 ORTHO05D004888 3.2e-20 102.4 53 84.9
Lalb_Chr23g0274161 Lupinus albus HOM05D001033 ORTHO05D004888 5.4e-20 101.7 53 83.0
C09p29570 Brassica napus HOM05D001033 ORTHO05D004888 8.7e-18 94.4 43 93.0
Phvul.005G068600 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 2.5e-17 92.8 86 50.0
ClCG00G002680 Citrullus lanatus HOM05D001033 ORTHO05D004888 6.2e-16 88.2 41 92.7
EL10Ac5g11368 Beta vulgaris HOM05D001033 ORTHO05D004888 5.8e-14 81.6 48 79.2
TAR338G0003 Trochodendron aralioides HOM05D001033 ORTHO05D004888 2.2e-13 79.7 39 89.7
MELO3C034226.2 Cucumis melo HOM05D001033 ORTHO05D004888 6.0e-11 71.6 53 64.2
AUR62014217 Chenopodium quinoa HOM05D001033 ORTHO05D002045 1.7e-10 70.1 46 69.6
Lalb_Chr03g0030871 Lupinus albus HOM05D001033 ORTHO05D004888 1.6e-08 63.5 68 48.5
Nitab4.5_0007578g0070 Nicotiana tabacum HOM05D012508 ORTHO05D011743 6.2e-08 61.6 60 56.7
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 5.3e-07 58.5 88 31.8
Hund10567 Selenicereus undatus HOM05D001033 ORTHO05D004888 5.3e-07 58.5 38 63.2
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 2.0e-06 56.6 88 30.7
BolSC47t61120H Brassica oleracea HOM05D001033 ORTHO05D004888 4.5e-06 55.5 24 95.8
FvH4_3g38401 Fragaria vesca HOM05D001033 ORTHO05D004888 7.6e-06 54.7 27 88.9


User provided reference genes

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