Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 6.6e-60 233.8 115 100.0
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.3e-52 209.5 114 91.2
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 2.1e-34 149.1 120 62.5
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 1.0e-20 103.6 85 63.5
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 3.1e-17 92.0 42 83.3
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 6.9e-17 90.9 104 48.1
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 9.0e-17 90.5 104 48.1
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.5e-16 89.7 42 83.3
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.5e-16 89.7 117 47.0
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 3.4e-16 88.6 80 50.0
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 4.5e-16 88.2 75 56.0
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 4.5e-16 88.2 53 66.0
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 5.9e-16 87.8 59 72.9
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 7.7e-16 87.4 77 57.1
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 7.7e-16 87.4 87 55.2
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.0e-15 87.0 103 43.7
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.0e-15 87.0 85 50.6
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.0e-15 87.0 68 61.8
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.3e-15 86.7 45 82.2
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 2.2e-15 85.9 103 48.5
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.2e-15 85.9 82 53.7
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 2.2e-15 85.9 68 60.3
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.9e-15 85.5 58 65.5
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 2.9e-15 85.5 74 56.8
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 3.8e-15 85.1 82 56.1
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.8e-15 85.1 96 49.0
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 3.8e-15 85.1 67 61.2
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 5.0e-15 84.7 74 60.8
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 5.0e-15 84.7 55 69.1
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 8.5e-15 84.0 41 82.9
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 8.5e-15 84.0 48 70.8
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.1e-14 83.6 75 54.7
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.4e-14 83.2 52 65.4
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 1.4e-14 83.2 49 71.4
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 1.4e-14 83.2 75 57.3
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 1.4e-14 83.2 75 57.3
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.9e-14 82.8 68 57.4
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 1.9e-14 82.8 77 51.9
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 1.9e-14 82.8 59 57.6
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 2.5e-14 82.4 57 64.9
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 3.2e-14 82.0 109 44.0
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 3.2e-14 82.0 37 89.2
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 4.2e-14 81.6 80 56.2
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 4.2e-14 81.6 119 44.5
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 4.2e-14 81.6 80 56.2
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 4.2e-14 81.6 96 52.1
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 4.2e-14 81.6 126 40.5
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 5.5e-14 81.3 97 47.4
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 7.2e-14 80.9 52 63.5
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 9.4e-14 80.5 38 84.2
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.2e-13 80.1 91 47.3
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.2e-13 80.1 105 44.8
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.2e-13 80.1 57 63.2
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.6e-13 79.7 74 55.4
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 1.6e-13 79.7 37 83.8
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.6e-13 79.7 41 78.0
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 3.6e-13 78.6 80 51.2
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 3.6e-13 78.6 74 51.4
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 3.6e-13 78.6 94 51.1
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 6.1e-13 77.8 33 84.8
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 7.9e-13 77.4 80 50.0
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 7.9e-13 77.4 80 50.0
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 7.9e-13 77.4 35 88.6
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 7.9e-13 77.4 33 90.9
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.0e-12 77.0 89 50.6
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 1.0e-12 77.0 40 77.5
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.4e-12 76.6 92 42.4
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 2.3e-12 75.9 36 83.3
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 3.9e-12 75.1 74 52.7
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 5.1e-12 74.7 36 75.0
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 6.7e-12 74.3 67 47.8
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.1e-11 73.6 38 78.9
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.1e-11 73.6 74 52.7
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.5e-11 73.2 39 74.4
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 1.5e-11 73.2 46 65.2
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.5e-11 73.2 47 68.1
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.5e-11 73.2 47 68.1
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 2.0e-11 72.8 36 77.8
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.5e-11 72.4 32 84.4
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 2.5e-11 72.4 57 54.4
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.3e-11 72.0 43 65.1
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.3e-11 72.0 43 65.1
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 4.3e-11 71.6 79 46.8
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.3e-11 71.6 43 65.1
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 5.7e-11 71.2 63 54.0
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 5.7e-11 71.2 92 45.7
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 7.4e-11 70.9 29 89.7
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.2e-10 69.3 31 83.9
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 2.2e-10 69.3 37 67.6
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 4.8e-10 68.2 120 40.0
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 4.8e-10 68.2 73 45.2
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 6.3e-10 67.8 69 52.2
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 6.3e-10 67.8 78 46.2
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 8.2e-10 67.4 90 42.2
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.1e-09 67.0 30 76.7
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 1.8e-09 66.2 33 72.7
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.8e-09 66.2 35 74.3
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.4e-09 65.9 76 44.7
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 6.9e-09 64.3 85 44.7
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 9.1e-09 63.9 117 39.3
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 9.1e-09 63.9 117 39.3
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 9.1e-09 63.9 66 51.5
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 9.1e-09 63.9 120 38.3
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 1.5e-08 63.2 34 70.6


User provided reference genes

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