Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0325291 Helianthus annuus HOM05D000088 ORTHO05D010316 8.2e-45 183.7 120 100.0
Lsat_1_v5_gn_4_156021 Lactuca sativa HOM05D000088 ORTHO05D010316 1.1e-25 120.2 106 61.3
ECA232G3198 Erigeron canadensis HOM05D000680 ORTHO05D000738 7.2e-25 117.5 95 66.3
Dinv33976 Davidia involucrata HOM05D000088 ORTHO05D010316 1.0e-23 113.6 98 61.2
Potri.017G123100 Populus trichocarpa HOM05D000088 ORTHO05D010316 1.8e-23 112.8 95 64.2
Lj2A437G38 Lonicera japonica HOM05D000088 ORTHO05D010316 6.7e-23 110.9 98 61.2
MBI16_g21179_MAGBIO Magnolia biondii HOM05D000088 ORTHO05D010316 8.8e-23 110.5 101 58.4
Hma1.2p1_0283F.1_g113690 Hydrangea macrophylla HOM05D000088 ORTHO05D010316 3.3e-22 108.6 66 81.8
Aqoxy3G03980 Aquilegia oxysepala HOM05D000088 ORTHO05D010316 4.4e-22 108.2 95 60.0
Dinv14859 Davidia involucrata HOM05D000088 ORTHO05D010316 9.7e-22 107.1 98 59.2
Duzib168G1044 Durio zibethinus HOM05D000088 ORTHO05D010316 9.7e-22 107.1 99 58.6
TWI74G1269 Tripterygium wilfordii HOM05D000088 ORTHO05D010316 2.2e-21 105.9 95 61.1
Ciclev10013745m.g Citrus clementina HOM05D000088 ORTHO05D010316 2.8e-21 105.5 94 61.7
DCAR_010718 Daucus carota HOM05D000048 ORTHO05D000207 2.8e-21 105.5 63 82.5
Gohir.A09G104300 Gossypium hirsutum HOM05D000088 ORTHO05D010316 2.8e-21 105.5 99 58.6
Gohir.D09G101001 Gossypium hirsutum HOM05D000088 ORTHO05D010316 2.8e-21 105.5 99 58.6
Manes.02G072900 Manihot esculenta HOM05D000088 ORTHO05D010316 2.8e-21 105.5 94 61.7
Actinidia36350 Actinidia chinensis HOM05D000088 ORTHO05D010316 6.3e-21 104.4 98 58.2
Sopen02g035800 Solanum pennellii HOM05D000088 ORTHO05D010316 6.3e-21 104.4 96 60.4
PGR042G2545 Punica granatum HOM05D000088 ORTHO05D010316 1.1e-20 103.6 94 60.6
Solyc02g091160.4 Solanum lycopersicum HOM05D000088 ORTHO05D010316 1.1e-20 103.6 96 60.4
CAN.G625.67 Capsicum annuum HOM05D000088 ORTHO05D010316 1.8e-20 102.8 93 62.4
Gorai.006G118500 Gossypium raimondii HOM05D000088 ORTHO05D010316 1.8e-20 102.8 99 57.6
Thecc.09G265200 Theobroma cacao HOM05D000088 ORTHO05D010316 2.4e-20 102.4 61 85.2
Cc07_g08380 Coffea canephora HOM05D000088 ORTHO05D010316 3.1e-20 102.1 95 61.1
CSS0022873 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D010316 4.1e-20 101.7 92 60.9
COL.COLO4_25319 Corchorus olitorius HOM05D000088 ORTHO05D010316 4.1e-20 101.7 93 60.2
Cpa.g.sc170.4 Carica papaya HOM05D000088 ORTHO05D010316 5.3e-20 101.3 94 59.6
PGSC0003DMG401030595 Solanum tuberosum HOM05D000088 ORTHO05D010316 5.3e-20 101.3 92 62.0
Lsat_1_v5_gn_5_76780 Lactuca sativa HOM05D000088 ORTHO05D010316 7.0e-20 100.9 74 70.3
Oeu047431.1 Olea europaea HOM05D000088 ORTHO05D010316 9.1e-20 100.5 103 76.7
Migut.L00484 Erythranthe guttata HOM05D000088 ORTHO05D010316 1.6e-19 99.8 95 58.9
Peaxi162Scf39498g00008 Petunia axillaris HOM05D000088 ORTHO05D010316 1.6e-19 99.8 60 86.7
Nitab4.5_0002456g0070 Nicotiana tabacum HOM05D000088 ORTHO05D010316 3.5e-19 98.6 91 61.5
Lsat_1_v5_gn_4_17460 Lactuca sativa HOM05D000088 ORTHO05D010316 5.9e-19 97.8 75 70.7
MD00G1053900 Malus domestica HOM05D000088 ORTHO05D010316 7.7e-19 97.4 98 55.1
Prupe.3G150700 Prunus persica HOM05D000088 ORTHO05D010316 1.3e-18 96.7 95 57.9
Lsat_1_v5_gn_1_65000 Lactuca sativa HOM05D000088 ORTHO05D010316 1.7e-18 96.3 65 78.5
RcHm_v2.0_Chr5g0011771 Rosa chinensis HOM05D000088 ORTHO05D010316 2.2e-18 95.9 95 56.8
SalBow7G2549 Salvia bowleyana HOM05D000088 ORTHO05D010316 3.8e-18 95.1 92 57.6
FvH4_3g27960 Fragaria vesca HOM05D000088 ORTHO05D010316 5.0e-18 94.7 96 54.2
FAN11G1459 Fragaria x ananassa HOM05D000088 ORTHO05D010316 5.0e-18 94.7 96 54.2
Lsat_1_v5_gn_4_95401 Lactuca sativa HOM05D000088 ORTHO05D010316 6.5e-18 94.4 63 77.8
FAN16G2281 Fragaria x ananassa HOM05D000088 ORTHO05D010316 8.5e-18 94.0 96 53.1
FAN21G2292 Fragaria x ananassa HOM05D000088 ORTHO05D010316 8.5e-18 94.0 96 53.1
FAN25G2134 Fragaria x ananassa HOM05D000088 ORTHO05D010316 8.5e-18 94.0 96 53.1
Lsat_1_v5_gn_7_26420 Lactuca sativa HOM05D000336 ORTHO05D000593 4.2e-17 91.7 74 68.9
Lsat_1_v5_gn_3_18340 Lactuca sativa HOM05D030395 ORTHO05D010316 8.0e-16 87.4 58 77.6
Nitab4.5_0005700g0060 Nicotiana tabacum HOM05D000088 ORTHO05D010316 6.6e-10 67.8 69 56.5
SMO172G0076 Selaginella moellendorffii HOM05D000088 ORTHO05D002723 1.2e-08 63.5 105 40.0
ATR0680G219 Amborella trichopoda HOM05D000088 ORTHO05D002723 2.1e-08 62.8 82 45.1
AagrBONN_evm.TU.Sc2ySwM_362.128 Anthoceros agrestis HOM05D000088 ORTHO05D002723 4.7e-08 61.6 90 41.1
Actinidia15912 Actinidia chinensis HOM05D000088 ORTHO05D010316 6.8e-07 57.8 39 74.4
MBI18_g21563_MAGBIO Magnolia biondii HOM05D000088 ORTHO05D002723 8.9e-07 57.4 51 54.9
Prupe.2G168200 Prunus persica HOM05D000088 ORTHO05D002723 8.9e-07 57.4 50 54.0
Duzib133G0447 Durio zibethinus HOM05D000088 ORTHO05D010316 2.6e-06 55.8 49 55.1
SEGI_13413 Sequoiadendron giganteum HOM05D000088 ORTHO05D010316 2.6e-06 55.8 49 59.2
Aqoxy7G00321 Aquilegia oxysepala HOM05D000088 ORTHO05D002723 3.4e-06 55.5 52 51.9
Pp3c1_35460 Physcomitrium patens HOM05D000088 ORTHO05D003056 4.4e-06 55.1 57 43.9
Potri.002G158950 Populus trichocarpa HOM05D000088 ORTHO05D002723 4.4e-06 55.1 57 47.4
PGR042G3653 Punica granatum HOM05D000088 ORTHO05D002723 4.4e-06 55.1 57 49.1
CSS0013597 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D002723 5.7e-06 54.7 58 43.1
CSS0045106 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D002723 5.7e-06 54.7 58 43.1
COL.COLO4_12703 Corchorus olitorius HOM05D000088 ORTHO05D002723 5.7e-06 54.7 49 53.1
DCAR_006925 Daucus carota HOM05D000088 ORTHO05D002723 5.7e-06 54.7 57 47.4
Duzib138G1668 Durio zibethinus HOM05D000088 ORTHO05D002723 5.7e-06 54.7 49 53.1
Gohir.D12G112400 Gossypium hirsutum HOM05D000088 ORTHO05D002723 5.7e-06 54.7 57 47.4
Gorai.008G121800 Gossypium raimondii HOM05D000088 ORTHO05D002723 5.7e-06 54.7 57 47.4
Gorai.012G021800 Gossypium raimondii HOM05D003195 ORTHO05D010316 5.7e-06 54.7 57 47.4
Oeu033968.2 Olea europaea HOM05D000088 ORTHO05D002723 9.8e-06 53.9 57 47.4
TAR375G0075 Trochodendron aralioides HOM05D000088 ORTHO05D002723 9.8e-06 53.9 49 53.1


User provided reference genes

Program Settings