Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 4.1e-66 254.6 131 100.0
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 6.4e-51 204.1 129 80.6
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 1.7e-35 152.9 140 70.0
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 2.3e-24 115.9 129 49.6
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 8.7e-24 114.0 110 59.1
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 1.5e-23 113.2 129 50.4
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 1.5e-23 113.2 120 57.5
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 2.5e-23 112.5 124 53.2
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 4.3e-23 111.7 135 53.3
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 7.4e-23 110.9 106 56.6
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 2.8e-22 109.0 128 54.7
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 2.8e-22 109.0 93 62.4
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 3.7e-22 108.6 110 57.3
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 1.1e-21 107.1 128 53.1
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.4e-21 106.7 129 53.5
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.4e-21 106.7 101 60.4
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 1.8e-21 106.3 128 53.9
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 4.0e-21 105.1 135 51.1
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 4.0e-21 105.1 126 50.8
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 9.0e-21 104.0 129 52.7
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 9.0e-21 104.0 90 62.2
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 9.0e-21 104.0 94 61.7
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 2.6e-20 102.4 64 82.8
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.5e-20 101.7 79 65.8
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 4.5e-20 101.7 113 56.6
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 5.8e-20 101.3 95 62.1
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.8e-20 101.3 130 45.4
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.8e-20 101.3 134 47.0
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 7.6e-20 100.9 69 75.4
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.6e-20 100.9 134 47.0
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 7.6e-20 100.9 82 64.6
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 7.6e-20 100.9 135 46.7
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 1.0e-19 100.5 103 55.3
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 1.0e-19 100.5 129 53.5
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 1.0e-19 100.5 129 53.5
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.0e-19 100.5 130 47.7
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.0e-19 100.5 130 47.7
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 1.3e-19 100.1 78 73.1
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 1.3e-19 100.1 134 47.0
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.3e-19 100.1 88 65.9
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.3e-19 100.1 89 60.7
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 2.2e-19 99.4 112 51.8
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 2.2e-19 99.4 131 50.4
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 2.9e-19 99.0 104 54.8
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 2.9e-19 99.0 125 51.2
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 4.9e-19 98.2 78 71.8
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 4.9e-19 98.2 78 71.8
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 4.9e-19 98.2 73 69.9
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 6.5e-19 97.8 102 55.9
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 6.5e-19 97.8 96 52.1
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 6.5e-19 97.8 108 53.7
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 8.4e-19 97.4 120 50.8
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 1.1e-18 97.1 79 68.4
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 1.1e-18 97.1 128 49.2
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.9e-18 96.3 82 63.4
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.9e-18 96.3 94 57.4
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 3.2e-18 95.5 67 73.1
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 3.2e-18 95.5 63 76.2
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 3.2e-18 95.5 63 76.2
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 4.2e-18 95.1 67 73.1
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 4.2e-18 95.1 72 70.8
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 5.5e-18 94.7 101 56.4
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 5.5e-18 94.7 93 58.1
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 7.1e-18 94.4 67 70.1
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 9.3e-18 94.0 134 47.0
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 1.6e-17 93.2 130 50.8
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 1.6e-17 93.2 130 50.8
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.6e-17 93.2 129 48.8
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 2.1e-17 92.8 95 56.8
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 2.7e-17 92.4 148 44.6
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 2.7e-17 92.4 94 58.5
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 6.0e-17 91.3 71 66.2
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.9e-17 90.9 80 62.5
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 7.9e-17 90.9 132 43.9
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.0e-16 90.5 97 51.5
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 1.3e-16 90.1 147 42.9
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.8e-16 89.7 85 62.4
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 2.3e-16 89.4 99 58.6
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 2.3e-16 89.4 77 61.0
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.0e-16 89.0 61 67.2
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 3.0e-16 89.0 132 50.8
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 5.1e-16 88.2 102 50.0
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 5.1e-16 88.2 98 54.1
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.7e-16 87.4 62 69.4
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.9e-15 86.3 67 67.2
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 2.5e-15 85.9 63 69.8
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 3.3e-15 85.5 100 56.0
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.3e-15 85.5 83 59.0
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 5.7e-15 84.7 105 49.5
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.7e-15 84.7 164 39.0
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 7.4e-15 84.3 84 58.3
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 7.4e-15 84.3 84 53.6
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 9.6e-15 84.0 50 82.0
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 1.6e-14 83.2 114 50.0
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 4.8e-14 81.6 126 44.4
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 4.8e-14 81.6 109 49.5
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 6.3e-14 81.3 63 66.7
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 8.2e-14 80.9 108 50.0
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 1.8e-13 79.7 94 53.2
Lsat_1_v5_gn_3_76280 Lactuca sativa HOM05D006100 ORTHO05D007539 3.1e-13 79.0 128 41.4
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 1.2e-12 77.0 107 44.9
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 1.2e-12 77.0 113 46.0
SalBow5G1753 Salvia bowleyana HOM05D006100 ORTHO05D007539 1.5e-12 76.6 94 48.9
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 1.5e-12 76.6 75 60.0
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 2.0e-12 76.3 75 60.0
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 7.6e-12 74.3 124 41.1
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.0e-11 73.9 114 44.7
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 2.2e-11 72.8 97 50.5
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 2.9e-11 72.4 76 50.0
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 8.4e-11 70.9 85 48.2
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 1.4e-10 70.1 90 53.3
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 1.9e-10 69.7 118 44.1
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 7.2e-10 67.8 79 49.4
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 2.7e-09 65.9 61 57.4
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 6.1e-09 64.7 101 42.6
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 2.3e-08 62.8 50 64.0
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 3.9e-08 62.0 124 37.1
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 6.7e-08 61.2 78 53.8
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 1.9e-07 59.7 61 55.7
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 1.9e-07 59.7 128 42.2
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 5.7e-07 58.2 69 52.2
Sc03g0002950 Simmondsia chinensis HOM05D006100 ORTHO05D007539 9.7e-07 57.4 81 48.1


User provided reference genes

Program Settings