Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 2.8e-39 164.9 86 100.0
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 6.3e-39 163.7 86 98.8
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 6.3e-39 163.7 86 98.8
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 3.1e-38 161.4 86 96.5
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 1.0e-36 156.4 86 94.2
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 1.0e-36 156.4 86 94.2
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 3.8e-36 154.5 85 92.9
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 3.8e-36 154.5 84 92.9
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 5.0e-36 154.1 86 91.9
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 5.0e-36 154.1 86 91.9
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 6.5e-36 153.7 86 91.9
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 8.5e-36 153.3 86 91.9
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 8.5e-36 153.3 86 91.9
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.1e-35 152.9 86 91.9
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.4e-35 152.5 86 90.7
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.4e-35 152.5 86 90.7
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 1.9e-35 152.1 86 90.7
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 1.9e-35 152.1 86 90.7
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 1.9e-35 152.1 86 91.9
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 1.9e-35 152.1 86 91.9
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 1.9e-35 152.1 86 90.7
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 1.9e-35 152.1 86 90.7
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 1.9e-35 152.1 86 90.7
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 2.5e-35 151.8 86 91.9
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 2.5e-35 151.8 83 92.8
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.5e-35 151.8 83 92.8
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.5e-35 151.8 83 92.8
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.5e-35 151.8 83 92.8
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 2.5e-35 151.8 86 91.9
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 2.5e-35 151.8 86 91.9
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 2.5e-35 151.8 86 91.9
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 2.5e-35 151.8 86 90.7
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 2.5e-35 151.8 86 91.9
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 2.5e-35 151.8 86 91.9
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 2.5e-35 151.8 83 92.8
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 4.2e-35 151.0 86 89.5
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 4.2e-35 151.0 86 90.7
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 4.2e-35 151.0 84 90.5
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 4.2e-35 151.0 86 91.9
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 4.2e-35 151.0 86 91.9
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 4.2e-35 151.0 83 91.6
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 5.5e-35 150.6 83 92.8
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 5.5e-35 150.6 86 89.5
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 5.5e-35 150.6 83 92.8
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 5.5e-35 150.6 86 90.7
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 5.5e-35 150.6 86 89.5
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 7.2e-35 150.2 84 88.1
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 7.2e-35 150.2 86 90.7
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 7.2e-35 150.2 83 91.6
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 7.2e-35 150.2 86 90.7
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 7.2e-35 150.2 83 91.6
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 9.4e-35 149.8 84 88.1
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 9.4e-35 149.8 86 89.5
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 9.4e-35 149.8 86 90.7
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 9.4e-35 149.8 86 89.5
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 1.2e-34 149.4 83 91.6
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 1.2e-34 149.4 83 91.6
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.2e-34 149.4 86 89.5
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 1.6e-34 149.1 84 89.3
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 2.1e-34 148.7 83 90.4
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 2.7e-34 148.3 86 87.2
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 4.7e-34 147.5 86 88.4
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 6.1e-34 147.1 83 89.2
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 8.0e-34 146.7 86 88.4
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 8.0e-34 146.7 86 89.5
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 8.0e-34 146.7 80 91.2
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 1.4e-33 146.0 83 88.0
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 2.3e-33 145.2 88 85.2
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 2.3e-33 145.2 83 88.0
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 1.3e-31 139.4 85 84.7
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 1.3e-31 139.4 85 84.7
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 6.3e-31 137.1 86 82.6
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 8.2e-31 136.7 90 78.9
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 1.4e-30 136.0 86 79.1
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 1.6e-29 132.5 72 93.1
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 1.6e-29 132.5 83 79.5
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 5.9e-29 130.6 73 91.8
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 7.7e-29 130.2 72 91.7
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 1.0e-28 129.8 78 84.6
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 6.5e-28 127.1 86 79.1
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 6.5e-28 127.1 86 79.1
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 6.5e-28 127.1 86 79.1
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 2.5e-27 125.2 85 78.8
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 2.5e-27 125.2 85 78.8
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 3.2e-27 124.8 73 89.0
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 3.2e-27 124.8 83 79.5
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 5.5e-27 124.0 83 80.7
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 5.5e-27 124.0 71 84.5
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 7.2e-27 123.6 83 78.3
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 7.2e-27 123.6 86 76.7
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 2.1e-26 122.1 73 82.2
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 8.0e-26 120.2 86 73.3
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 1.4e-25 119.4 93 69.9
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 1.4e-25 119.4 85 75.3
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 1.9e-19 99.0 71 69.0
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 7.2e-19 97.1 72 66.7
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.2e-18 96.3 86 65.1
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 4.7e-18 94.4 71 62.0
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 2.0e-16 89.0 69 59.4
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 4.4e-16 87.8 64 73.4
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 3.7e-15 84.7 44 90.9
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 4.8e-15 84.3 56 82.1
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 4.5e-13 77.8 46 78.3
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 5.9e-13 77.4 70 60.0
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 1.0e-09 66.6 64 43.8
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 6.3e-07 57.4 33 81.8


User provided reference genes

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