Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 1.9e-144 515.8 253 100.0
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 1.8e-113 412.9 257 80.2
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 8.4e-108 394.0 231 82.7
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 5.0e-92 341.7 253 64.4
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 2.5e-91 339.3 205 76.6
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 2.5e-91 339.3 209 74.2
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 4.2e-91 338.6 232 68.5
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.6e-90 336.7 225 69.8
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.6e-90 336.7 235 68.9
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.8e-89 333.2 237 64.1
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 6.7e-89 331.3 258 60.9
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 8.7e-89 330.9 216 69.9
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 3.3e-88 328.9 238 62.2
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 4.3e-88 328.6 229 69.0
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 5.7e-88 328.2 200 75.0
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 5.7e-88 328.2 200 75.0
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 7.4e-88 327.8 210 71.0
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 7.4e-88 327.8 218 69.3
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.6e-87 326.6 228 65.8
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 8.2e-87 324.3 227 68.3
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 8.2e-87 324.3 221 67.9
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 8.2e-87 324.3 232 66.8
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.8e-86 323.2 224 67.0
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 2.4e-86 322.8 207 70.5
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 4.1e-86 322.0 201 69.2
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 9.1e-86 320.9 239 64.0
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 9.1e-86 320.9 232 64.7
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.2e-85 320.5 201 69.7
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 1.5e-85 320.1 211 67.8
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 2.0e-85 319.7 212 68.4
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 2.6e-85 319.3 214 67.8
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 2.6e-85 319.3 210 69.0
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 3.4e-85 318.9 232 66.8
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 3.4e-85 318.9 222 68.0
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 7.7e-85 317.8 223 63.7
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.0e-84 317.4 211 69.2
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.3e-84 317.0 195 73.3
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.7e-84 316.6 221 67.0
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 5.0e-84 315.1 217 66.8
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 6.5e-84 314.7 215 69.3
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 8.5e-84 314.3 223 66.4
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 8.5e-84 314.3 228 64.9
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 2.5e-83 312.8 240 61.7
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 4.2e-83 312.0 214 67.8
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 4.2e-83 312.0 218 68.8
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 5.5e-83 311.6 202 69.3
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 7.2e-83 311.2 211 68.2
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 9.4e-83 310.8 214 67.3
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 9.4e-83 310.8 218 67.9
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.6e-82 310.1 218 67.4
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 1.6e-82 310.1 239 60.7
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 2.1e-82 309.7 221 66.1
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 2.1e-82 309.7 216 67.1
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 2.7e-82 309.3 210 68.1
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 6.1e-82 308.1 214 65.4
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.0e-81 307.4 228 61.8
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.4e-81 307.0 194 69.6
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 1.8e-81 306.6 211 66.8
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.8e-81 306.6 271 57.9
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 2.3e-81 306.2 208 68.3
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 2.3e-81 306.2 217 64.1
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 3.0e-81 305.8 213 66.7
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 3.0e-81 305.8 200 67.5
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 5.1e-81 305.1 239 59.4
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 2.0e-80 303.1 195 70.8
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 2.6e-80 302.8 240 63.3
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 3.3e-80 302.4 205 67.3
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 4.4e-80 302.0 195 71.3
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.7e-80 301.6 240 63.3
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 1.3e-79 300.4 241 61.4
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.7e-79 300.1 235 62.6
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 2.2e-79 299.7 195 70.3
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.2e-77 293.9 212 67.5
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.2e-77 293.9 207 67.1
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 1.3e-76 290.4 195 68.7
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 1.1e-75 287.3 179 70.9
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 7.2e-75 284.6 220 61.8
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 1.2e-74 283.9 204 65.7
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 1.6e-74 283.5 163 77.3
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 7.4e-72 274.6 218 62.4
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 2.8e-71 272.7 179 68.2
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.4e-70 270.4 199 63.8
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 7.0e-70 268.1 183 68.3
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 2.6e-69 266.2 182 67.6
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.2e-67 258.8 179 69.8
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 2.1e-66 256.5 212 59.9
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 3.0e-65 252.7 197 57.9
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 9.7e-64 247.7 167 67.7
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.2e-63 246.5 227 51.5
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 2.8e-63 246.1 134 80.6
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.8e-62 243.4 213 54.5
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 7.0e-62 241.5 167 70.7
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 2.7e-61 239.6 192 56.2
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 4.2e-59 232.3 168 64.9
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 5.5e-59 231.9 152 69.7
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.4e-57 227.3 136 73.5
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 5.2e-49 198.7 206 49.0
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.4e-46 190.7 217 46.5
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 5.4e-46 188.7 111 73.9
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 3.5e-45 186.0 129 69.0
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.5e-43 180.6 202 50.0
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 9.8e-40 167.9 102 69.6
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 3.5e-37 159.5 182 41.2
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 9.5e-35 151.4 145 50.3
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 9.2e-30 134.8 81 74.1
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 4.6e-29 132.5 93 61.3
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.9e-23 113.2 85 62.4
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 2.3e-20 103.6 60 80.0
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 3.3e-19 99.8 73 57.5
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.6e-18 97.4 55 78.2
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 6.8e-17 92.0 73 63.0
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.3e-15 87.8 55 72.7
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 3.0e-12 76.6 67 56.7
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 8.7e-12 75.1 54 57.4
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 2.8e-10 70.1 92 43.5
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 2.8e-10 70.1 92 43.5
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 2.8e-10 70.1 92 43.5
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 8.1e-10 68.6 91 42.9
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.4e-09 67.8 76 42.1
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 6.9e-09 65.5 45 60.0
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 2.2e-07 60.5 33 75.8


User provided reference genes

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