Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 4.0e-54 214.5 111 100.0
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 2.7e-26 122.1 103 70.9
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 3.5e-18 95.1 81 75.3
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 3.5e-18 95.1 81 75.3
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 3.5e-18 95.1 81 75.3
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 3.5e-18 95.1 81 75.3
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 3.5e-18 95.1 81 75.3
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 3.5e-18 95.1 81 75.3
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 3.5e-18 95.1 81 75.3
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.5e-16 89.0 87 67.8
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.5e-16 89.0 87 67.8
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.5e-16 89.0 87 67.8
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.5e-16 89.0 87 67.8
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.5e-16 89.0 87 67.8
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 5.7e-16 87.8 82 69.5
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 5.7e-16 87.8 81 71.6
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 7.4e-16 87.4 81 70.4
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 7.4e-16 87.4 81 71.6
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 9.7e-16 87.0 81 70.4
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 9.7e-16 87.0 81 70.4
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 9.7e-16 87.0 81 70.4
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 9.7e-16 87.0 87 66.7
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 1.3e-15 86.7 81 69.1
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 1.6e-15 86.3 81 69.1
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 1.6e-15 86.3 87 65.5
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 2.2e-15 85.9 87 66.7
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 2.2e-15 85.9 87 64.4
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 2.2e-15 85.9 87 65.5
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 2.2e-15 85.9 87 65.5
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 2.8e-15 85.5 81 69.1
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 3.7e-15 85.1 87 66.7
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 3.7e-15 85.1 81 69.1
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 3.7e-15 85.1 81 69.1
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 3.7e-15 85.1 81 69.1
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 6.3e-15 84.3 87 65.5
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 1.1e-14 83.6 81 67.9
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 1.1e-14 83.6 81 67.9
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 1.8e-14 82.8 78 69.2
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.8e-14 82.8 81 66.7
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 3.1e-14 82.0 81 65.4
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 1.2e-13 80.1 86 61.6
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 1.2e-13 80.1 86 61.6
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.5e-13 79.7 89 61.8
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 2.0e-13 79.3 90 60.0
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 2.0e-13 79.3 81 66.7
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 4.5e-13 78.2 86 60.5
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 5.9e-13 77.8 81 65.4
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 1.0e-12 77.0 81 65.4
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 1.0e-12 77.0 86 60.5
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 1.3e-12 76.6 87 60.9
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 1.3e-12 76.6 73 72.6
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 1.3e-12 76.6 81 63.0
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 1.7e-12 76.3 76 68.4
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 8.5e-12 73.9 73 67.1
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 5.5e-11 71.2 88 60.2
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 1.0e-09 67.0 78 57.7
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 1.4e-09 66.6 67 70.1
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 5.1e-09 64.7 71 59.2
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 6.7e-09 64.3 73 61.6
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.1e-08 63.5 77 55.8
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 1.5e-08 63.2 75 60.0
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 4.8e-07 58.2 39 82.1
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 8.2e-07 57.4 52 63.5
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 6.9e-06 54.3 64 57.8
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 9.1e-06 53.9 29 93.1


User provided reference genes

Program Settings