Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0323311 Helianthus annuus HOM05D005934 ORTHO05D005165 4.7e-219 764.6 497 100.0
ECA238G0735 Erigeron canadensis HOM05D005934 ORTHO05D005165 3.2e-143 512.7 451 82.9
HanXRQChr14g0457271 Helianthus annuus HOM05D005934 ORTHO05D005165 8.4e-136 488.0 466 79.0
Lsat_1_v5_gn_2_113761 Lactuca sativa HOM05D005934 ORTHO05D005165 1.1e-124 451.1 463 73.4
Dinv31355 Davidia involucrata HOM05D005934 ORTHO05D005165 2.1e-102 377.1 468 62.6
CSS0015713 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 4.7e-102 375.9 458 59.2
Dinv11795 Davidia involucrata HOM05D005934 ORTHO05D005165 1.1e-100 371.3 454 68.7
Sabra10G0169500 Salix brachista HOM05D005934 ORTHO05D005165 1.2e-92 344.7 465 63.9
Atru.chr12.720 Acer truncatum HOM05D005934 ORTHO05D005165 3.3e-92 343.2 461 51.6
CSS0026746 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 6.3e-91 339.0 440 51.8
Potri.010G219700 Populus trichocarpa HOM05D005934 ORTHO05D005165 8.2e-91 338.6 464 63.6
CSS0046829 Camellia sinensis var. sinensis HOM05D005934 ORTHO05D005165 5.9e-89 332.4 440 54.8
Ciclev10031457m.g Citrus clementina HOM05D005934 ORTHO05D005165 5.9e-89 332.4 468 54.5
TWI38G0616 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 5.2e-85 319.3 459 49.0
Duzib114G0889 Durio zibethinus HOM05D005934 ORTHO05D005165 6.8e-85 318.9 472 47.2
Prupe.2G216000 Prunus persica HOM05D005934 ORTHO05D005165 2.6e-84 317.0 458 48.3
MD01G1111100 Malus domestica HOM05D005934 ORTHO05D005165 2.8e-83 313.5 467 47.3
TAR636G3344 Trochodendron aralioides HOM05D005934 ORTHO05D005165 3.7e-83 313.2 482 53.1
Phvul.007G092600 Phaseolus vulgaris HOM05D005934 ORTHO05D005165 1.8e-82 310.8 452 47.8
GSVIVG01016314001 Vitis vinifera HOM05D005934 ORTHO05D005165 5.4e-82 309.3 451 59.0
QL08p056591 Quercus lobata HOM05D005934 ORTHO05D005165 7.0e-82 308.9 480 46.0
Gohir.A05G297600 Gossypium hirsutum HOM05D005934 ORTHO05D005165 9.1e-82 308.5 459 47.5
RcHm_v2.0_Chr1g0363881 Rosa chinensis HOM05D005934 ORTHO05D005165 1.6e-81 307.8 466 47.6
CANSAT56G0550 Cannabis sativa HOM05D005934 ORTHO05D005165 7.7e-81 305.4 452 46.2
FvH4_7g19882 Fragaria vesca HOM05D005934 ORTHO05D005165 1.7e-80 304.3 463 45.4
Gohir.A05G345500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 2.2e-80 303.9 460 47.4
FAN01G0846 Fragaria x ananassa HOM05D005934 ORTHO05D005165 2.9e-80 303.5 462 45.7
vmacro07085 Vaccinium macrocarpon HOM05D005934 ORTHO05D005165 3.8e-80 303.1 474 46.8
FAN03G0840 Fragaria x ananassa HOM05D005934 ORTHO05D005165 6.5e-80 302.4 463 45.1
Gohir.D05G297500 Gossypium hirsutum HOM05D005934 ORTHO05D005165 8.5e-80 302.0 454 46.5
Gorai.009G314800 Gossypium raimondii HOM05D005934 ORTHO05D005165 1.1e-79 301.6 454 46.5
Lj5g0021458 Lotus japonicus HOM05D005934 ORTHO05D005165 1.5e-79 301.2 455 47.7
FAN01G1479 Fragaria x ananassa HOM05D005934 ORTHO05D005165 2.5e-79 300.4 457 46.0
Haze_16922 Corylus avellana HOM05D005934 ORTHO05D005165 9.5e-79 298.5 476 44.3
FAN10G0472 Fragaria x ananassa HOM05D005934 ORTHO05D005165 9.5e-79 298.5 459 45.5
Eucgr.G02812 Eucalyptus grandis HOM05D005934 ORTHO05D005165 1.2e-78 298.1 461 46.6
TAR633G0441 Trochodendron aralioides HOM05D005934 ORTHO05D005165 2.1e-78 297.4 488 58.4
TWI63G0603 Tripterygium wilfordii HOM05D005934 ORTHO05D005165 2.8e-78 297.0 361 53.7
Gohir.D04G084700 Gossypium hirsutum HOM05D005934 ORTHO05D005165 1.0e-77 295.0 449 46.3
PGR142G2623 Punica granatum HOM05D005934 ORTHO05D005165 1.0e-77 295.0 469 45.2
Nitab4.5_0008994g0010 Nicotiana tabacum HOM05D005934 ORTHO05D005165 2.3e-77 293.9 455 45.9
Medtr1g095640 Medicago truncatula HOM05D005934 ORTHO05D005165 3.0e-77 293.5 463 45.4
TPR.G1756 Trifolium pratense HOM05D005934 ORTHO05D005165 3.0e-77 293.5 464 46.1
arahy.Tifrunner.gnm1.ann1.H195MC Arachis hypogaea HOM05D005934 ORTHO05D005165 4.0e-77 293.1 454 45.8
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 5.2e-77 292.7 356 53.9
Ca_10584_v3 Cicer arietinum L. HOM05D005934 ORTHO05D005165 6.8e-77 292.4 458 46.1
PSO339G5008 Papaver somniferum HOM05D005934 ORTHO05D005165 6.8e-77 292.4 468 45.5
Sc09g0006590 Simmondsia chinensis HOM05D005934 ORTHO05D005165 2.0e-76 290.8 449 51.4
Nitab4.5_0000233g0170 Nicotiana tabacum HOM05D005934 ORTHO05D005165 7.5e-76 288.9 452 45.6
CsaV3_5G025820 Cucumis sativus L. HOM05D005934 ORTHO05D005165 3.7e-75 286.6 475 59.2
PSO541G4936 Papaver somniferum HOM05D005934 ORTHO05D005165 4.9e-75 286.2 469 44.6
Psat6g182920 Pisum sativum HOM05D005934 ORTHO05D005165 1.1e-74 285.0 457 50.3
Manes.10G044200 Manihot esculenta HOM05D005934 ORTHO05D005165 1.8e-74 284.3 358 52.5
Gorai.012G094400 Gossypium raimondii HOM05D005934 ORTHO05D005165 2.4e-74 283.9 358 53.4
arahy.Tifrunner.gnm1.ann1.W2M3W6 Arachis hypogaea HOM05D005934 ORTHO05D005165 1.6e-73 281.2 354 52.0
Cpa.g.sc53.46 Carica papaya HOM05D005934 ORTHO05D005165 2.7e-73 280.4 476 47.1
Sp6g12980 Schrenkiella parvula HOM05D005934 ORTHO05D005165 4.5e-73 279.6 451 44.1
EL10Ac2g03586 Beta vulgaris HOM05D005934 ORTHO05D005165 1.1e-71 275.0 383 49.3
MD07G1177300 Malus domestica HOM05D005934 ORTHO05D005165 1.1e-71 275.0 465 44.1
Thhalv10013687m.g Eutrema salsugineum HOM05D005934 ORTHO05D005165 2.5e-71 273.9 452 43.8
C03p19490 Brassica napus HOM05D005934 ORTHO05D005165 3.3e-71 273.5 451 44.8
Carub.0008s1083 Capsella rubella HOM05D005934 ORTHO05D005165 7.3e-71 272.3 458 44.1
COL.COLO4_23717 Corchorus olitorius HOM05D005934 ORTHO05D005165 7.3e-71 272.3 457 46.2
BolC3t14330H Brassica oleracea HOM05D005934 ORTHO05D005165 9.5e-71 271.9 450 44.7
SGA_v2.0_scaffold13G06359 Striga asiatica HOM05D005934 ORTHO05D005165 1.2e-70 271.6 462 47.8
Aa31LG3G7310 Aethionema arabicum HOM05D005934 ORTHO05D005165 3.6e-70 270.0 453 58.7
AL8G25010 Arabidopsis lyrata HOM05D005934 ORTHO05D005165 8.0e-70 268.9 449 43.7
Thecc.10G070000 Theobroma cacao HOM05D005934 ORTHO05D005165 1.0e-69 268.5 465 45.6
Lalb_Chr02g0141961 Lupinus albus HOM05D005934 ORTHO05D005165 1.4e-69 268.1 460 47.4
Oeu043928.1 Olea europaea HOM05D005934 ORTHO05D005165 3.0e-69 266.9 452 49.1
BraA03t10943Z Brassica rapa HOM05D005934 ORTHO05D005165 4.0e-69 266.5 453 43.7
AT5G50840 Arabidopsis thaliana HOM05D005934 ORTHO05D005165 5.2e-69 266.2 451 43.9
A03p16560 Brassica napus HOM05D005934 ORTHO05D005165 5.2e-69 266.2 452 43.8
THA.LOC104819151 Tarenaya hassleriana HOM05D005934 ORTHO05D005165 1.2e-68 265.0 442 55.9
CARHR257410 Cardamine hirsuta HOM05D005934 ORTHO05D005165 2.0e-68 264.2 449 43.2
CiPaw.02G175500 Carya illinoinensis HOM05D005934 ORTHO05D005165 2.0e-68 264.2 309 54.7
Solyc04g047750.3 Solanum lycopersicum HOM05D005934 ORTHO05D005165 5.7e-68 262.7 447 43.2
Sopen04g017890 Solanum pennellii HOM05D005934 ORTHO05D005165 1.7e-67 261.2 447 43.2
CAN.G471.3 Capsicum annuum HOM05D005934 ORTHO05D005165 2.2e-67 260.8 457 42.9
Migut.F01993 Erythranthe guttata HOM05D005934 ORTHO05D005165 2.9e-67 260.4 452 43.1
Sed0003296 Sechium edule HOM05D005934 ORTHO05D005165 8.3e-67 258.8 465 44.7
Glyma.20G178100 Glycine max HOM05D005934 ORTHO05D005165 1.1e-66 258.5 456 42.5
Aqoxy2G01769 Aquilegia oxysepala HOM05D005934 ORTHO05D005165 1.4e-66 258.1 453 41.3
Cc02_g11420 Coffea canephora HOM05D005934 ORTHO05D005165 2.4e-66 257.3 443 46.7
MELO3C002886.2 Cucumis melo HOM05D005934 ORTHO05D005165 2.4e-66 257.3 304 74.7
MSTRG.27465 Avicennia marina HOM05D005934 ORTHO05D005165 3.5e-65 253.4 444 42.3
BcaC03g14634 Brassica carinata HOM05D005934 ORTHO05D005165 2.3e-64 250.8 330 50.0
Ah.11g043450 Amaranthus hybridus HOM05D005934 ORTHO05D005165 2.5e-63 247.3 447 42.3
BcaB05g24030 Brassica carinata HOM05D005934 ORTHO05D005165 2.5e-63 247.3 449 41.2
C02p20680 Brassica napus HOM05D005934 ORTHO05D005165 7.3e-63 245.7 333 50.2
BolC2t08210H Brassica oleracea HOM05D005934 ORTHO05D005165 7.3e-63 245.7 333 50.2
unitig_899.g14449 Utricularia gibba HOM05D005934 ORTHO05D005165 1.1e-58 231.9 451 38.8
ClCG09G020550 Citrullus lanatus HOM05D005934 ORTHO05D005165 1.9e-58 231.1 462 40.3
BraA02t06319Z Brassica rapa HOM05D005934 ORTHO05D005165 4.1e-58 229.9 445 40.7
Actinidia38257 Actinidia chinensis HOM05D005934 ORTHO05D005165 2.7e-57 227.3 494 51.6
A02p12610 Brassica napus HOM05D005934 ORTHO05D005165 1.1e-55 221.9 435 40.5
Os03g0288600 Oryza sativa ssp. japonica HOM05D005934 ORTHO05D005165 1.9e-55 221.1 455 38.9
Aa31LG3G7290 Aethionema arabicum HOM05D005934 ORTHO05D005165 2.1e-54 217.6 350 44.9
AUR62027949 Chenopodium quinoa HOM05D005934 ORTHO05D005165 6.2e-54 216.1 361 43.5
Hund22502 Selenicereus undatus HOM05D005934 ORTHO05D005165 8.1e-54 215.7 276 75.4
MBI05_g20541_MAGBIO Magnolia biondii HOM05D005934 ORTHO05D005165 2.6e-52 210.7 501 51.7
ATR0759G024 Amborella trichopoda HOM05D005934 ORTHO05D005165 6.4e-51 206.1 512 34.6
Zm00001eb013240 Zea mays HOM05D005934 ORTHO05D005165 7.8e-49 199.1 308 50.0
Zm00001eb397090 Zea mays HOM05D005934 ORTHO05D005165 6.6e-48 196.1 460 36.5
AUR62020763 Chenopodium quinoa HOM05D005934 ORTHO05D005165 4.3e-47 193.4 467 36.2
Hund19343 Selenicereus undatus HOM05D005934 ORTHO05D005165 1.5e-44 184.9 439 36.7
DCAR_003640 Daucus carota HOM05D005934 ORTHO05D005165 1.3e-40 171.8 228 58.8
Lj1C919T16 Lonicera japonica HOM05D005934 ORTHO05D005165 6.2e-38 162.9 261 46.0
Mapoly0007s0101 Marchantia polymorpha HOM05D005934 ORTHO05D005165 1.0e-32 145.6 290 37.6
HPP92_006750 Vanilla planifolia HOM05D005934 ORTHO05D005165 6.6e-32 142.9 272 39.7
SMO201G0134 Selaginella moellendorffii HOM05D005934 ORTHO05D005165 1.5e-28 131.7 249 36.9
Pp3c11_23150 Physcomitrium patens HOM05D005934 ORTHO05D005165 2.9e-27 127.5 328 44.5
Lsat_1_v5_gn_1_128800 Lactuca sativa HOM05D005934 ORTHO05D005165 1.2e-25 122.1 202 74.8
THA.LOC104819150 Tarenaya hassleriana HOM05D005934 ORTHO05D005165 4.8e-22 110.2 166 75.9
A03p42390 Brassica napus HOM05D005934 ORTHO05D005165 6.2e-22 109.8 82 73.2
BraA03t13391Z Brassica rapa HOM05D005934 ORTHO05D005165 6.2e-22 109.8 82 73.2
Actinidia03038 Actinidia chinensis HOM05D005934 ORTHO05D005165 1.3e-19 102.1 157 86.6
CBR_g15990 Chara braunii HOM05D005934 ORTHO05D005165 2.2e-19 101.3 341 27.6
Peaxi162Scf00108g01212 Petunia axillaris HOM05D005934 ORTHO05D005165 1.1e-18 99.0 156 85.3
Peaxi162Scf00108g01217 Petunia axillaris HOM05D005934 ORTHO05D005165 1.8e-16 91.7 332 31.3
Medtr1g101870 Medicago truncatula HOM05D000280 ORTHO05D000632 2.7e-09 67.8 61 60.7
Nn2g10701 Nelumbo nucifera HOM05D005934 ORTHO05D005165 9.7e-07 59.3 188 31.4
Actinidia03037 Actinidia chinensis HOM05D005934 ORTHO05D005165 1.6e-06 58.5 162 33.3


User provided reference genes

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