Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 1.1e-51 206.5 110 100.0
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 1.3e-44 183.0 108 89.8
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 6.4e-44 180.6 109 89.0
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.9e-41 171.4 110 80.9
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 1.2e-39 166.4 106 80.2
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 2.1e-39 165.6 107 77.6
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 2.1e-39 165.6 105 81.9
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 6.2e-39 164.1 110 77.3
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 8.0e-39 163.7 109 77.1
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 1.8e-38 162.5 110 79.1
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 2.3e-38 162.2 100 81.0
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 5.2e-38 161.0 107 76.6
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 1.2e-37 159.8 105 79.0
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 2.0e-37 159.1 101 79.2
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 2.0e-37 159.1 106 77.4
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.6e-37 158.7 108 75.9
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 2.6e-37 158.7 110 76.4
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 2.6e-37 158.7 106 75.5
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 2.6e-37 158.7 102 79.4
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 3.4e-37 158.3 106 77.4
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 3.4e-37 158.3 106 77.4
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 4.4e-37 157.9 106 76.4
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 4.4e-37 157.9 97 84.5
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 4.4e-37 157.9 102 78.4
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 5.8e-37 157.5 104 76.9
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 5.8e-37 157.5 109 76.1
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 9.8e-37 156.8 110 75.5
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 1.3e-36 156.4 102 79.4
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 1.3e-36 156.4 111 74.8
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.7e-36 156.0 108 74.1
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 2.9e-36 155.2 109 73.4
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 3.7e-36 154.8 107 74.8
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 6.4e-36 154.1 111 74.8
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 1.1e-35 153.3 104 73.1
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 1.9e-35 152.5 111 72.1
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 2.4e-35 152.1 102 75.5
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 4.1e-35 151.4 108 70.4
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 5.4e-35 151.0 110 73.6
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 5.4e-35 151.0 108 73.1
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 9.2e-35 150.2 100 77.0
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.2e-34 149.8 109 75.2
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 1.6e-34 149.4 106 73.6
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 1.6e-34 149.4 116 71.6
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 1.6e-34 149.4 107 72.9
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 2.1e-34 149.1 111 71.2
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 3.5e-34 148.3 107 73.8
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 3.5e-34 148.3 108 72.2
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 3.5e-34 148.3 108 72.2
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 4.6e-34 147.9 103 72.8
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 4.6e-34 147.9 106 71.7
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 6.0e-34 147.5 111 68.5
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 7.8e-34 147.1 108 69.4
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 7.8e-34 147.1 102 75.5
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 1.0e-33 146.7 102 76.5
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 1.0e-33 146.7 102 76.5
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 1.0e-33 146.7 97 77.3
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.0e-33 146.7 116 69.8
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.0e-33 146.7 116 69.8
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.0e-33 146.7 116 69.8
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.0e-33 146.7 116 69.8
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.0e-33 146.7 116 69.8
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 1.0e-33 146.7 115 71.3
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 1.7e-33 146.0 114 70.2
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 2.3e-33 145.6 100 75.0
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 2.3e-33 145.6 108 72.2
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 3.0e-33 145.2 111 67.6
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 3.0e-33 145.2 109 70.6
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 3.9e-33 144.8 102 72.5
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 3.9e-33 144.8 91 79.1
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 8.6e-33 143.7 102 73.5
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 8.6e-33 143.7 109 68.8
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.1e-32 143.3 111 69.4
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.5e-32 142.9 108 69.4
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.5e-32 142.9 108 69.4
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.5e-32 142.9 108 69.4
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.9e-32 142.5 99 76.8
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 2.5e-32 142.1 100 72.0
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 3.3e-32 141.7 109 71.6
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 5.6e-32 141.0 88 83.0
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 9.5e-32 140.2 103 68.0
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 9.5e-32 140.2 109 67.0
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 9.5e-32 140.2 106 69.8
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 9.5e-32 140.2 89 78.7
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 1.2e-31 139.8 100 76.0
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 1.2e-31 139.8 100 76.0
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 1.2e-31 139.8 100 76.0
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.2e-31 139.8 108 68.5
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 1.2e-31 139.8 109 70.6
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 3.6e-31 138.3 115 69.6
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 8.1e-31 137.1 83 83.1
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.4e-30 136.3 108 68.5
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 6.8e-30 134.0 113 65.5
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 1.2e-29 133.3 111 63.1
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.5e-29 132.9 81 82.7
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 4.4e-29 131.3 147 53.1
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 4.4e-29 131.3 82 82.9
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 1.4e-27 126.3 109 64.2
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 8.6e-25 117.1 102 60.8
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 2.5e-24 115.5 97 67.0
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 3.1e-22 108.6 102 55.9
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 7.6e-21 104.0 87 58.6
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 3.8e-20 101.7 78 67.9
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 4.9e-20 101.3 77 68.8
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 6.4e-20 100.9 77 68.8
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 1.1e-19 100.1 108 46.3
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 1.4e-19 99.8 79 68.4
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 5.4e-19 97.8 87 59.8
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 5.4e-19 97.8 87 59.8
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 4.6e-18 94.7 91 53.8
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 1.2e-15 86.7 118 44.9
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 2.8e-15 85.5 71 70.4
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 3.6e-15 85.1 53 77.4
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 1.1e-14 83.6 88 46.6
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 1.8e-14 82.8 53 75.5
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 3.1e-14 82.0 61 62.3
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 5.2e-14 81.3 81 53.1
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 2.0e-13 79.3 53 69.8
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 2.0e-13 79.3 71 67.6
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 1.7e-12 76.3 48 72.9
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 4.9e-12 74.7 76 52.6
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 1.1e-11 73.6 90 44.4
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 2.4e-11 72.4 54 63.0
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 7.8e-10 67.4 49 67.3
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 2.1e-07 59.3 46 60.9
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 2.4e-06 55.8 46 63.0
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 3.1e-06 55.5 46 63.0
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 3.1e-06 55.5 46 63.0


User provided reference genes

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