Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0322471 Helianthus annuus HOM05D005407 ORTHO05D006544 4.0e-122 441.8 289 100.0
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 2.0e-65 253.4 322 54.0
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 5.7e-60 235.3 333 52.6
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 1.9e-23 114.0 325 32.3
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 2.1e-22 110.5 293 32.1
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 8.1e-22 108.6 320 31.9
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 1.1e-21 108.2 313 35.1
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 1.4e-18 97.8 311 30.9
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.9e-18 97.4 333 28.2
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 9.2e-18 95.1 330 28.2
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.0e-16 91.7 327 29.1
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.0e-16 90.1 327 30.0
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 3.9e-16 89.7 358 27.9
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.1e-15 88.2 327 29.7
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 2.5e-15 87.0 328 29.6
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 7.3e-15 85.5 318 26.4
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 7.3e-15 85.5 298 32.9
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 4.7e-14 82.8 317 31.2
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 1.4e-13 81.3 373 29.0
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 3.1e-13 80.1 324 28.4
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 1.3e-11 74.7 338 30.5
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 2.9e-11 73.6 359 27.3
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 8.4e-11 72.0 368 26.6
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.1e-10 71.6 343 28.9
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 2.4e-10 70.5 298 26.5
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 3.2e-10 70.1 364 24.5
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 5.4e-10 69.3 350 24.3
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.4e-10 69.3 349 29.5
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 7.1e-10 68.9 364 29.4
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 7.1e-10 68.9 292 30.8
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 9.3e-10 68.6 349 29.2
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.2e-09 68.2 349 25.2
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 1.2e-09 68.2 330 27.6
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 2.1e-09 67.4 330 27.3
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 4.6e-09 66.2 175 31.4
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 6.0e-09 65.9 344 24.4
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 6.0e-09 65.9 187 28.3
HanXRQChr12g0377191 Helianthus annuus HOM05D005407 ORTHO05D006544 7.8e-09 65.5 320 30.0
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 1.3e-08 64.7 342 25.7
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 1.3e-08 64.7 310 25.8
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 5.1e-08 62.8 384 27.9
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 6.6e-08 62.4 123 35.0
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 6.6e-08 62.4 340 26.8
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 1.5e-07 61.2 172 30.8
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 1.5e-07 61.2 366 23.0
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 2.5e-07 60.5 121 37.2
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 2.5e-07 60.5 121 37.2
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 2.5e-07 60.5 348 25.0
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 3.3e-07 60.1 299 29.1
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 3.3e-07 60.1 176 32.4
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 3.3e-07 60.1 299 29.1
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 3.3e-07 60.1 299 29.1
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 3.3e-07 60.1 330 24.5
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 4.3e-07 59.7 176 32.4
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 5.6e-07 59.3 210 33.3
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 9.6e-07 58.5 359 32.9
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 1.3e-06 58.2 159 30.8
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 1.6e-06 57.8 382 26.2
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 2.1e-06 57.4 177 31.1
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 2.8e-06 57.0 77 44.2
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.8e-06 57.0 78 41.0
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 2.8e-06 57.0 353 26.6
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 3.6e-06 56.6 303 25.7
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 4.8e-06 56.2 387 22.7
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 4.8e-06 56.2 350 26.3
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 6.2e-06 55.8 305 23.3
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 6.2e-06 55.8 363 27.5
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 8.1e-06 55.5 179 31.8
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 8.1e-06 55.5 141 36.9


User provided reference genes

Program Settings