Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0322411 Helianthus annuus HOM05D007262 ORTHO05D008524 9.2e-104 380.2 186 100.0
Lsat_1_v5_gn_7_54640 Lactuca sativa HOM05D007262 ORTHO05D008524 3.6e-55 218.8 148 76.4
Hma1.2p1_1025F.1_g249350 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 1.5e-24 117.1 195 43.1
CSS0001479 Camellia sinensis var. sinensis HOM05D007262 ORTHO05D008524 1.0e-22 110.9 113 53.1
Hma1.2p1_0900F.1_g234550 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 1.4e-22 110.5 190 41.1
Lsat_1_v5_gn_8_67760 Lactuca sativa HOM05D007262 ORTHO05D008524 6.8e-22 108.2 96 57.3
ECA236G2076 Erigeron canadensis HOM05D007262 ORTHO05D008524 2.6e-21 106.3 95 60.0
Nitab4.5_0012916g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 4.9e-20 102.1 144 47.2
Nitab4.5_0007075g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 1.4e-19 100.5 143 46.2
Dinv41243 Davidia involucrata HOM05D007262 ORTHO05D008524 4.5e-18 95.5 89 61.8
CiPaw.07G192600 Carya illinoinensis HOM05D007262 ORTHO05D008524 1.7e-17 93.6 100 53.0
MD13G1252900 Malus domestica HOM05D007262 ORTHO05D008524 2.3e-17 93.2 184 41.3
Ciclev10010707m.g Citrus clementina HOM05D007262 ORTHO05D008524 2.9e-17 92.8 160 38.1
Potri.018G091900 Populus trichocarpa HOM05D007262 ORTHO05D008524 2.9e-17 92.8 196 35.2
AT5G57400 Arabidopsis thaliana HOM05D007262 ORTHO05D008524 5.0e-17 92.0 122 46.7
DCAR_017972 Daucus carota HOM05D007262 ORTHO05D008524 5.0e-17 92.0 183 37.7
Haze_22091 Corylus avellana HOM05D007262 ORTHO05D008524 6.6e-17 91.7 169 39.6
Gohir.A13G212100 Gossypium hirsutum HOM05D007262 ORTHO05D008524 8.6e-17 91.3 185 38.4
Gorai.013G246500 Gossypium raimondii HOM05D007262 ORTHO05D008524 1.1e-16 90.9 185 38.4
Oeu042172.1 Olea europaea HOM05D007262 ORTHO05D008524 1.1e-16 90.9 120 42.5
Potri.006G167300 Populus trichocarpa HOM05D007262 ORTHO05D008524 1.1e-16 90.9 99 49.5
AL8G33380 Arabidopsis lyrata HOM05D007262 ORTHO05D008524 1.5e-16 90.5 122 47.5
MELO3C004021.2 Cucumis melo HOM05D007262 ORTHO05D008524 2.5e-16 89.7 88 47.7
Prupe.1G085200 Prunus persica HOM05D007262 ORTHO05D008524 4.3e-16 89.0 172 41.3
Manes.14G154200 Manihot esculenta HOM05D007262 ORTHO05D008524 5.6e-16 88.6 211 34.1
Sabra18G0079000 Salix brachista HOM05D007262 ORTHO05D008524 5.6e-16 88.6 181 38.7
CiPaw.08G035900 Carya illinoinensis HOM05D007262 ORTHO05D008524 1.2e-15 87.4 193 38.9
CARHR271200 Cardamine hirsuta HOM05D007262 ORTHO05D008524 1.6e-15 87.0 116 44.0
Peaxi162Scf00231g00727 Petunia axillaris HOM05D007262 ORTHO05D008524 1.6e-15 87.0 70 65.7
RcHm_v2.0_Chr4g0402361 Rosa chinensis HOM05D007262 ORTHO05D008524 1.6e-15 87.0 180 40.6
Migut.J01486 Erythranthe guttata HOM05D007262 ORTHO05D008524 2.8e-15 86.3 127 44.1
Gohir.D13G216200 Gossypium hirsutum HOM05D007262 ORTHO05D008524 2.8e-15 86.3 184 38.6
Lj4g0007156 Lotus japonicus HOM05D007262 ORTHO05D008524 4.7e-15 85.5 154 43.5
Sabra06G0129200 Salix brachista HOM05D007262 ORTHO05D008524 4.7e-15 85.5 100 46.0
Cfa013501 Carpinus fangiana HOM05D007262 ORTHO05D008524 6.1e-15 85.1 170 39.4
Ca_21230_v3 Cicer arietinum L. HOM05D007262 ORTHO05D008524 8.0e-15 84.7 141 42.6
DCAR_009916 Daucus carota HOM05D007262 ORTHO05D008524 8.0e-15 84.7 164 40.2
Nitab4.5_0007075g0020 Nicotiana tabacum HOM05D007262 ORTHO05D008524 1.0e-14 84.3 92 55.4
MD16G1257400 Malus domestica HOM05D007262 ORTHO05D008524 2.3e-14 83.2 127 44.9
BcaB05g22344 Brassica carinata HOM05D007262 ORTHO05D008524 3.1e-14 82.8 92 50.0
Sed0023592 Sechium edule HOM05D007262 ORTHO05D008524 3.1e-14 82.8 167 39.5
CsaV3_2G008430 Cucumis sativus L. HOM05D007262 ORTHO05D008524 4.0e-14 82.4 122 38.5
Sc08g0005310 Simmondsia chinensis HOM05D007262 ORTHO05D008524 4.0e-14 82.4 171 35.7
TWI34G1693 Tripterygium wilfordii HOM05D007262 ORTHO05D008524 5.2e-14 82.0 172 35.5
BcaB08g36097 Brassica carinata HOM05D007262 ORTHO05D008524 6.8e-14 81.6 89 49.4
Rhsim01G0003900 Rhododendron simsii HOM05D000138 ORTHO05D000078 6.8e-14 81.6 174 35.1
Atru.chr7.612 Acer truncatum HOM05D007262 ORTHO05D008524 1.2e-13 80.9 193 35.2
C02p14260 Brassica napus HOM05D007262 ORTHO05D008524 1.2e-13 80.9 106 46.2
BolC2t07550H Brassica oleracea HOM05D007262 ORTHO05D008524 1.2e-13 80.9 106 46.2
PGR044G1778 Punica granatum HOM05D007262 ORTHO05D008524 1.2e-13 80.9 170 35.3
Thecc.09G176800 Theobroma cacao HOM05D007262 ORTHO05D008524 1.2e-13 80.9 153 39.9
BcaC03g14155 Brassica carinata HOM05D007262 ORTHO05D008524 1.5e-13 80.5 92 48.9
THA.LOC104811785 Tarenaya hassleriana HOM05D007262 ORTHO05D008524 2.0e-13 80.1 191 30.9
A02p08490 Brassica napus HOM05D007262 ORTHO05D008524 3.4e-13 79.3 136 39.0
BraA02t05922Z Brassica rapa HOM05D007262 ORTHO05D008524 3.4e-13 79.3 136 39.0
COL.COLO4_37717 Corchorus olitorius HOM05D007262 ORTHO05D008524 3.4e-13 79.3 178 37.6
CANSAT11G0589 Cannabis sativa HOM05D007262 ORTHO05D008524 4.4e-13 79.0 64 62.5
Solyc07g018310.4 Solanum lycopersicum HOM05D007262 ORTHO05D008524 4.4e-13 79.0 97 47.4
Sopen07g007460 Solanum pennellii HOM05D007262 ORTHO05D008524 4.4e-13 79.0 97 47.4
TAR383G0997 Trochodendron aralioides HOM05D007262 ORTHO05D008524 4.4e-13 79.0 157 39.5
Sp6g19120 Schrenkiella parvula HOM05D007262 ORTHO05D008524 5.8e-13 78.6 114 43.0
Aa31LG3G13290 Aethionema arabicum HOM05D007262 ORTHO05D008524 1.7e-12 77.0 93 49.5
Aa31LG3G240 Aethionema arabicum HOM05D007262 ORTHO05D008524 2.2e-12 76.6 85 51.8
SalBow6G4300 Salvia bowleyana HOM05D007262 ORTHO05D008524 2.2e-12 76.6 83 54.2
Sed0015293 Sechium edule HOM05D007262 ORTHO05D008524 2.9e-12 76.3 166 36.7
PGSC0003DMG400013783 Solanum tuberosum HOM05D007262 ORTHO05D008524 4.9e-12 75.5 97 44.3
Carub.0008s1792 Capsella rubella HOM05D007262 ORTHO05D008524 6.4e-12 75.1 100 46.0
Nn8g40468 Nelumbo nucifera HOM05D007262 ORTHO05D008524 6.4e-12 75.1 94 42.6
Glyma.13G096700 Glycine max HOM05D007262 ORTHO05D008524 8.3e-12 74.7 144 38.2
Medtr4g127960 Medicago truncatula HOM05D007262 ORTHO05D008524 1.1e-11 74.3 92 50.0
EL10Ac8g18288 Beta vulgaris HOM05D023972 ORTHO05D008524 1.9e-11 73.6 116 36.2
ClCG11G012130 Citrullus lanatus HOM05D007262 ORTHO05D008524 1.9e-11 73.6 138 37.0
CsaV3_1G031620 Cucumis sativus L. HOM05D007262 ORTHO05D008524 4.1e-11 72.4 109 47.7
C08p09700 Brassica napus HOM05D007262 ORTHO05D008524 5.4e-11 72.0 90 44.4
ClCG06G013370 Citrullus lanatus HOM05D007262 ORTHO05D008524 7.0e-11 71.6 118 43.2
Ah.14g083780 Amaranthus hybridus HOM05D007262 ORTHO05D008524 9.2e-11 71.2 115 36.5
AT4G25845 Arabidopsis thaliana HOM05D007262 ORTHO05D008524 9.2e-11 71.2 121 38.0
AT4G25850 Arabidopsis thaliana HOM05D003168 ORTHO05D003590 9.2e-11 71.2 121 38.0
AUR62021304 Chenopodium quinoa HOM05D007262 ORTHO05D008524 1.2e-10 70.9 96 45.8
arahy.Tifrunner.gnm1.ann1.7KD434 Arachis hypogaea HOM05D007262 ORTHO05D008524 2.0e-10 70.1 146 38.4
BcaC09g50739 Brassica carinata HOM05D007262 ORTHO05D008524 2.0e-10 70.1 85 44.7
C01p21440 Brassica napus HOM05D007262 ORTHO05D008524 2.0e-10 70.1 91 42.9
BolC1t02064H Brassica oleracea HOM05D003168 ORTHO05D003590 2.0e-10 70.1 91 42.9
Lalb_Chr07g0180511 Lupinus albus HOM05D007262 ORTHO05D008524 2.0e-10 70.1 94 44.7
AL7G27180 Arabidopsis lyrata HOM05D007262 ORTHO05D008524 2.7e-10 69.7 123 37.4
AUR62033222 Chenopodium quinoa HOM05D007262 ORTHO05D008524 2.7e-10 69.7 96 45.8
BraA01t01667Z Brassica rapa HOM05D003168 ORTHO05D003590 3.5e-10 69.3 91 44.0
Glyma.17G062800 Glycine max HOM05D007262 ORTHO05D008524 3.5e-10 69.3 147 40.8
A01p17120 Brassica napus HOM05D003168 ORTHO05D003590 4.6e-10 68.9 91 44.0
MELO3C017460.2 Cucumis melo HOM05D007262 ORTHO05D008524 4.6e-10 68.9 152 39.5
Carub.0007s1510 Capsella rubella HOM05D007262 ORTHO05D008524 1.0e-09 67.8 110 37.3
SGA_v2.0_scaffold69G23249 Striga asiatica HOM05D007262 ORTHO05D008524 1.0e-09 67.8 95 45.3
BcaC04g19970 Brassica carinata HOM05D007262 ORTHO05D008524 1.3e-09 67.4 151 37.1
VMungo1215G2644 Vigna mungo HOM05D007262 ORTHO05D008524 1.7e-09 67.0 154 38.3
Phvul.003G145250 Phaseolus vulgaris HOM05D007262 ORTHO05D008524 3.0e-09 66.2 147 40.1
C09p49280 Brassica napus HOM05D007262 ORTHO05D008524 5.0e-09 65.5 151 36.4
BolC9t57779H Brassica oleracea HOM05D007262 ORTHO05D008524 5.0e-09 65.5 151 36.4
BcaNung04103 Brassica carinata HOM05D007262 ORTHO05D008524 6.6e-09 65.1 91 41.8
CARHR233310 Cardamine hirsuta HOM05D007262 ORTHO05D008524 8.6e-09 64.7 85 41.2
A10p14860 Brassica napus HOM05D007262 ORTHO05D008524 5.6e-08 62.0 151 35.8
BraA10t43564Z Brassica rapa HOM05D007262 ORTHO05D008524 9.5e-08 61.2 151 35.1
LjContig00357g0012454 Lotus japonicus HOM05D002277 ORTHO05D001770 2.1e-07 60.1 80 43.8
Thhalv10026951m.g Eutrema salsugineum HOM05D007262 ORTHO05D008524 6.2e-07 58.5 87 40.2
Glyma.02G259200 Glycine max HOM05D002277 ORTHO05D001770 6.2e-07 58.5 66 43.9
CSS0032322 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 1.4e-06 57.4 69 46.4
VMungo0647G0912 Vigna mungo HOM05D002277 ORTHO05D001770 1.4e-06 57.4 66 43.9
Glyma.14G053500 Glycine max HOM05D002277 ORTHO05D001770 1.8e-06 57.0 66 43.9
QL02p097844 Quercus lobata HOM05D007262 ORTHO05D008524 2.3e-06 56.6 155 32.9
Thecc.09G176700 Theobroma cacao HOM05D018436 ORTHO05D025173 2.3e-06 56.6 107 39.3
Duzib128G0618 Durio zibethinus HOM05D002277 ORTHO05D001770 3.1e-06 56.2 65 41.5
Lalb_Chr04g0250281 Lupinus albus HOM05D002277 ORTHO05D001770 3.1e-06 56.2 63 44.4
TPR.G20193 Trifolium pratense HOM05D002277 ORTHO05D001770 3.1e-06 56.2 63 50.8
Manes.09G115500 Manihot esculenta HOM05D002277 ORTHO05D001770 4.0e-06 55.8 105 39.0
Glyma.11G235700 Glycine max HOM05D002277 ORTHO05D001770 5.2e-06 55.5 74 40.5
Phvul.001G249100 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 5.2e-06 55.5 73 43.8
Ciclev10009553m.g Citrus clementina HOM05D007262 ORTHO05D008524 6.8e-06 55.1 113 34.5
MELO3C026052.2 Cucumis melo HOM05D002277 ORTHO05D001770 6.8e-06 55.1 74 51.4
Glyma.18G021200 Glycine max HOM05D002277 ORTHO05D001770 6.8e-06 55.1 74 41.9
Lalb_Chr08g0231311 Lupinus albus HOM05D002277 ORTHO05D001770 6.8e-06 55.1 73 42.5
Phvul.008G218400 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 6.8e-06 55.1 66 42.4
CiPaw.08G035800 Carya illinoinensis HOM05D007262 ORTHO05D008524 8.9e-06 54.7 165 33.9
HanXRQChr11g0337191 Helianthus annuus HOM05D002277 ORTHO05D001770 8.9e-06 54.7 88 40.9
Lsat_1_v5_gn_5_148320 Lactuca sativa HOM05D002277 ORTHO05D001770 8.9e-06 54.7 82 40.2
Thecc.10G174900 Theobroma cacao HOM05D002277 ORTHO05D001770 8.9e-06 54.7 66 43.9


User provided reference genes

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