Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0322311 Helianthus annuus HOM05D000442 ORTHO05D221674 8.2e-42 173.3 89 100.0
HanXRQChr16g0525791 Helianthus annuus HOM05D000442 ORTHO05D006868 3.0e-12 75.1 39 97.4
HanXRQChr17g0557011 Helianthus annuus HOM05D000442 ORTHO05D006868 1.2e-11 73.2 39 94.9
ECA234G2123 Erigeron canadensis HOM05D000442 ORTHO05D006868 5.7e-11 70.9 39 84.6
Lsat_1_v5_gn_4_29701 Lactuca sativa HOM05D000442 ORTHO05D006868 9.8e-11 70.1 39 87.2
Sabra11G0065800 Salix brachista HOM05D000442 ORTHO05D006868 3.5e-08 61.6 41 70.7
Duzib160G0470 Durio zibethinus HOM05D000442 ORTHO05D006868 4.5e-08 61.2 41 70.7
Thecc.06G147900 Theobroma cacao HOM05D000442 ORTHO05D006868 4.5e-08 61.2 41 70.7
ClCG01G024740 Citrullus lanatus HOM05D000442 ORTHO05D006868 5.9e-08 60.8 40 67.5
MELO3C007123.2 Cucumis melo HOM05D000442 ORTHO05D006868 5.9e-08 60.8 40 67.5
CsaV3_6G051840 Cucumis sativus L. HOM05D000442 ORTHO05D006868 5.9e-08 60.8 40 67.5
Dinv32233 Davidia involucrata HOM05D000442 ORTHO05D006868 5.9e-08 60.8 41 73.2
GSVIVG01021523001 Vitis vinifera HOM05D000442 ORTHO05D006868 5.9e-08 60.8 41 73.2
Potri.011G082500 Populus trichocarpa HOM05D000442 ORTHO05D006868 7.8e-08 60.5 41 68.3
Ah.02g112480 Amaranthus hybridus HOM05D000442 ORTHO05D006868 1.0e-07 60.1 44 63.6
Cpa.g.sc17.4 Carica papaya HOM05D000442 ORTHO05D006868 1.0e-07 60.1 41 68.3
MBI02_g03073_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D006868 1.0e-07 60.1 58 56.9
Atru.chr10.1168 Acer truncatum HOM05D000442 ORTHO05D006868 1.7e-07 59.3 41 70.7
Lj2C320G7 Lonicera japonica HOM05D000442 ORTHO05D006868 1.7e-07 59.3 59 54.2
TAR626G1820 Trochodendron aralioides HOM05D000442 ORTHO05D006868 1.7e-07 59.3 59 55.9
Haze_05626 Corylus avellana HOM05D000442 ORTHO05D006868 2.3e-07 58.9 41 68.3
Gohir.A09G077100 Gossypium hirsutum HOM05D000442 ORTHO05D006868 2.3e-07 58.9 41 68.3
Gohir.D09G077100 Gossypium hirsutum HOM05D000442 ORTHO05D006868 2.3e-07 58.9 41 68.3
Gorai.006G092200 Gossypium raimondii HOM05D000442 ORTHO05D006868 2.3e-07 58.9 41 68.3
Nn3g20408 Nelumbo nucifera HOM05D000442 ORTHO05D006868 2.3e-07 58.9 41 68.3
Cfa000924 Carpinus fangiana HOM05D000442 ORTHO05D006868 2.9e-07 58.5 41 65.9
Ciclev10014608m.g Citrus clementina HOM05D000442 ORTHO05D006868 2.9e-07 58.5 41 65.9
QL05p055843 Quercus lobata HOM05D000442 ORTHO05D006868 2.9e-07 58.5 41 65.9
MBI18_g11241_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D006868 3.9e-07 58.2 41 68.3
Manes.15G123500 Manihot esculenta HOM05D000442 ORTHO05D006868 3.9e-07 58.2 41 68.3
Actinidia39585 Actinidia chinensis HOM05D000442 ORTHO05D006868 5.0e-07 57.8 41 70.7
CANSAT35G1070 Cannabis sativa HOM05D000442 ORTHO05D006868 5.0e-07 57.8 41 65.9
Lj6g0008133 Lotus japonicus HOM05D000442 ORTHO05D006868 5.0e-07 57.8 58 48.3
MD10G1260300 Malus domestica HOM05D000442 ORTHO05D006868 5.0e-07 57.8 40 67.5
Nn4g26604 Nelumbo nucifera HOM05D000442 ORTHO05D006868 5.0e-07 57.8 44 63.6
Potri.004G066100 Populus trichocarpa HOM05D000442 ORTHO05D006868 5.0e-07 57.8 61 50.8
Rhsim13G0115500 Rhododendron simsii HOM05D000442 ORTHO05D006868 5.0e-07 57.8 41 70.7
Aqoxy1G01680 Aquilegia oxysepala HOM05D000442 ORTHO05D006868 6.6e-07 57.4 59 54.2
Prupe.4G083200 Prunus persica HOM05D000442 ORTHO05D006868 6.6e-07 57.4 40 70.0
RcHm_v2.0_Chr5g0014461 Rosa chinensis HOM05D000442 ORTHO05D006868 6.6e-07 57.4 59 54.2
Sed0026453 Sechium edule HOM05D000442 ORTHO05D006868 6.6e-07 57.4 38 65.8
CiPaw.09G121800 Carya illinoinensis HOM05D000442 ORTHO05D006868 8.6e-07 57.0 59 54.2
Hma1.2p1_0185F.1_g081430 Hydrangea macrophylla HOM05D000442 ORTHO05D006868 8.6e-07 57.0 38 76.3
Hund09657 Selenicereus undatus HOM05D000442 ORTHO05D006868 8.6e-07 57.0 44 56.8
ATR1098G152 Amborella trichopoda HOM05D000442 ORTHO05D006868 1.1e-06 56.6 63 47.6
Eucgr.E02424 Eucalyptus grandis HOM05D000442 ORTHO05D006868 1.1e-06 56.6 41 65.9
AUR62011772 Chenopodium quinoa HOM05D000442 ORTHO05D006868 1.5e-06 56.2 44 59.1
AUR62024615 Chenopodium quinoa HOM05D000442 ORTHO05D006868 1.5e-06 56.2 44 59.1
MD05G1281400 Malus domestica HOM05D000442 ORTHO05D006868 1.5e-06 56.2 40 65.0
HPP92_005871 Vanilla planifolia HOM05D000442 ORTHO05D006868 1.5e-06 56.2 59 50.8
FAN16G2020 Fragaria x ananassa HOM05D000442 ORTHO05D006868 1.9e-06 55.8 59 49.2
Sed0000914 Sechium edule HOM05D000442 ORTHO05D006868 1.9e-06 55.8 38 63.2
vmacro03341 Vaccinium macrocarpon HOM05D000442 ORTHO05D006868 1.9e-06 55.8 56 57.1
EL10As5g23566 Beta vulgaris HOM05D000442 ORTHO05D006868 2.5e-06 55.5 64 45.3
CDE12G0527 Ceratophyllum demersum HOM05D000442 ORTHO05D006868 2.5e-06 55.5 56 55.4
FvH4_3g05250 Fragaria vesca HOM05D000442 ORTHO05D006868 2.5e-06 55.5 41 63.4
FAN11G3325 Fragaria x ananassa HOM05D000442 ORTHO05D006868 2.5e-06 55.5 41 63.4
FAN25G1399 Fragaria x ananassa HOM05D000442 ORTHO05D006868 2.5e-06 55.5 41 63.4
FAN25G3287 Fragaria x ananassa HOM05D000442 ORTHO05D006868 2.5e-06 55.5 41 63.4
Nitab4.5_0005094g0030 Nicotiana tabacum HOM05D000442 ORTHO05D006868 2.5e-06 55.5 41 65.9
Nitab4.5_0006038g0010 Nicotiana tabacum HOM05D000442 ORTHO05D006868 2.5e-06 55.5 41 65.9
Peaxi162Scf00317g00017 Petunia axillaris HOM05D000442 ORTHO05D006868 2.5e-06 55.5 41 63.4
Psat7g081200 Pisum sativum HOM05D000442 ORTHO05D006868 2.5e-06 55.5 41 61.0
CiPaw.10G090300 Carya illinoinensis HOM05D000442 ORTHO05D006868 3.3e-06 55.1 41 58.5
CDE01G0362 Ceratophyllum demersum HOM05D000442 ORTHO05D006868 3.3e-06 55.1 56 53.6
Dinv05220 Davidia involucrata HOM05D000442 ORTHO05D006868 3.3e-06 55.1 41 65.9
Lalb_Chr15g0086741 Lupinus albus HOM05D000442 ORTHO05D006868 3.3e-06 55.1 59 47.5
PGR083G2694 Punica granatum HOM05D000442 ORTHO05D006868 3.3e-06 55.1 41 61.0
CAN.G42.15 Capsicum annuum HOM05D000442 ORTHO05D006868 4.3e-06 54.7 41 65.9
Cc00_g05750 Coffea canephora HOM05D000442 ORTHO05D006868 4.3e-06 54.7 41 61.0
FAN21G1137 Fragaria x ananassa HOM05D000442 ORTHO05D006868 4.3e-06 54.7 41 63.4
TPR.G13305 Trifolium pratense HOM05D000442 ORTHO05D006868 4.3e-06 54.7 40 60.0
CSS0033595 Camellia sinensis var. sinensis HOM05D000442 ORTHO05D006868 5.6e-06 54.3 40 65.0
DCAR_007882 Daucus carota HOM05D000442 ORTHO05D006868 5.6e-06 54.3 54 59.3
TWI09G1294 Tripterygium wilfordii HOM05D000442 ORTHO05D006868 5.6e-06 54.3 41 61.0
Lj4g0002628 Lotus japonicus HOM05D000442 ORTHO05D006868 7.3e-06 53.9 59 44.1
Lalb_Chr20g0117831 Lupinus albus HOM05D000442 ORTHO05D006868 7.3e-06 53.9 59 44.1
THA.LOC104806133 Tarenaya hassleriana HOM05D000442 ORTHO05D006868 9.5e-06 53.5 41 56.1


User provided reference genes

Program Settings