Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0322071 Helianthus annuus HOM05D000608 ORTHO05D000444 1.3e-44 182.6 86 100.0
HanXRQChr08g0213451 Helianthus annuus HOM05D000608 ORTHO05D000444 2.4e-22 108.6 68 77.9
HanXRQChr14g0459141 Helianthus annuus HOM05D000608 ORTHO05D000444 1.7e-20 102.4 69 73.9
ECA246G3814 Erigeron canadensis HOM05D000608 ORTHO05D000444 2.2e-15 85.5 69 59.4
ECA233G4691 Erigeron canadensis HOM05D000608 ORTHO05D000444 4.8e-15 84.3 69 63.8
HanXRQChr17g0552011 Helianthus annuus HOM05D000608 ORTHO05D000444 8.3e-15 83.6 65 60.0
Lsat_1_v5_gn_3_61660 Lactuca sativa HOM05D000608 ORTHO05D000444 9.1e-14 80.1 67 58.2
Lsat_1_v5_gn_3_61501 Lactuca sativa HOM05D000608 ORTHO05D000444 2.7e-13 78.6 72 55.6
Lsat_1_v5_gn_8_41320 Lactuca sativa HOM05D000608 ORTHO05D000444 7.7e-13 77.0 48 75.0
Migut.L00986 Erythranthe guttata HOM05D000608 ORTHO05D000444 3.3e-11 71.6 80 47.5
Migut.L01031 Erythranthe guttata HOM05D000608 ORTHO05D000444 5.5e-11 70.9 80 47.5
CSS0000860 Camellia sinensis var. sinensis HOM05D000608 ORTHO05D000444 1.6e-10 69.3 72 54.2
CSS0019198 Camellia sinensis var. sinensis HOM05D000608 ORTHO05D000444 2.1e-10 68.9 72 54.2
Actinidia26693 Actinidia chinensis HOM05D000608 ORTHO05D000444 2.8e-10 68.6 61 62.3
Oeu057750.1 Olea europaea HOM05D000608 ORTHO05D000444 3.6e-10 68.2 73 53.4
AUR62037286 Chenopodium quinoa HOM05D000608 ORTHO05D000444 4.7e-10 67.8 68 51.5
arahy.Tifrunner.gnm1.ann1.RPSG4N Arachis hypogaea HOM05D000608 ORTHO05D000444 6.1e-10 67.4 73 47.9
Cc11_g09720 Coffea canephora HOM05D000608 ORTHO05D000444 6.1e-10 67.4 72 51.4
Rhsim09G0104100 Rhododendron simsii HOM05D000608 ORTHO05D000444 8.0e-10 67.0 75 50.7
Cfa015844 Carpinus fangiana HOM05D000608 ORTHO05D000444 2.3e-09 65.5 61 59.0
AUR62002823 Chenopodium quinoa HOM05D000608 ORTHO05D000444 2.3e-09 65.5 68 50.0
Glyma.09G181300 Glycine max HOM05D000608 ORTHO05D000444 2.3e-09 65.5 73 47.9
Medtr6g082450 Medicago truncatula HOM05D000608 ORTHO05D000444 2.3e-09 65.5 72 50.0
arahy.Tifrunner.gnm1.ann1.61PIUZ Arachis hypogaea HOM05D000608 ORTHO05D000444 4.0e-09 64.7 73 46.6
MD06G1219600 Malus domestica HOM05D000608 ORTHO05D000444 5.2e-09 64.3 72 51.4
CSS0011183 Camellia sinensis var. sinensis HOM05D000608 ORTHO05D000444 6.8e-09 63.9 72 52.8
Sc04g0006090 Simmondsia chinensis HOM05D000608 ORTHO05D000444 6.8e-09 63.9 68 50.0
VMungo0464G0644 Vigna mungo HOM05D000608 ORTHO05D000444 6.8e-09 63.9 72 48.6
Aqoxy3G00211 Aquilegia oxysepala HOM05D000608 ORTHO05D000444 8.9e-09 63.5 71 49.3
Oeu048364.1 Olea europaea HOM05D000608 ORTHO05D000444 8.9e-09 63.5 56 57.1
Actinidia16027 Actinidia chinensis HOM05D000608 ORTHO05D000444 1.2e-08 63.2 69 55.1
Peaxi162Scf00179g00311 Petunia axillaris HOM05D000608 ORTHO05D000444 1.2e-08 63.2 79 48.1
arahy.Tifrunner.gnm1.ann1.8JCU9U Arachis hypogaea HOM05D000240 ORTHO05D002721 1.5e-08 62.8 67 47.8
Phvul.004G154400 Phaseolus vulgaris HOM05D000608 ORTHO05D000444 1.5e-08 62.8 72 47.2
vmacro10598 Vaccinium macrocarpon HOM05D000608 ORTHO05D000444 1.5e-08 62.8 79 48.1
EL10Ac6g14319 Beta vulgaris HOM05D000608 ORTHO05D000444 2.0e-08 62.4 68 51.5
Migut.E00365 Erythranthe guttata HOM05D000608 ORTHO05D000444 2.0e-08 62.4 72 48.6
SalBow8G0663 Salvia bowleyana HOM05D000608 ORTHO05D007780 2.0e-08 62.4 79 48.1
SalBow8G2565 Salvia bowleyana HOM05D000608 ORTHO05D007780 2.0e-08 62.4 79 48.1
Solyc05g008920.3 Solanum lycopersicum HOM05D000608 ORTHO05D000444 2.0e-08 62.4 79 48.1
Sopen05g004680 Solanum pennellii HOM05D000608 ORTHO05D000444 2.0e-08 62.4 79 48.1
CANSAT01G0733 Cannabis sativa HOM05D000608 ORTHO05D000444 2.6e-08 62.0 61 55.7
Lalb_Chr24g0397931 Lupinus albus HOM05D000608 ORTHO05D000444 2.6e-08 62.0 72 50.0
RcHm_v2.0_Chr7g0186041 Rosa chinensis HOM05D000608 ORTHO05D000444 2.6e-08 62.0 71 50.7
Lj4g0023661 Lotus japonicus HOM05D000608 ORTHO05D000444 3.4e-08 61.6 70 45.7
Manes.06G065300 Manihot esculenta HOM05D000608 ORTHO05D000444 3.4e-08 61.6 79 46.8
Medtr1g110070 Medicago truncatula HOM05D000608 ORTHO05D000444 3.4e-08 61.6 72 51.4
Nitab4.5_0002112g0010 Nicotiana tabacum HOM05D000608 ORTHO05D000444 3.4e-08 61.6 79 44.3
Oeu062996.1 Olea europaea HOM05D000608 ORTHO05D000444 3.4e-08 61.6 69 52.2
TPR.G29483 Trifolium pratense HOM05D000608 ORTHO05D000444 3.4e-08 61.6 72 45.8
Actinidia38366 Actinidia chinensis HOM05D000608 ORTHO05D000444 4.4e-08 61.2 72 47.2
Glyma.05G139200 Glycine max HOM05D000608 ORTHO05D000444 4.4e-08 61.2 72 44.4
Lj2g0012715 Lotus japonicus HOM05D000608 ORTHO05D000444 4.4e-08 61.2 72 51.4
Manes.14G106400 Manihot esculenta HOM05D000608 ORTHO05D000444 4.4e-08 61.2 79 46.8
Nitab4.5_0000694g0170 Nicotiana tabacum HOM05D000608 ORTHO05D000444 4.4e-08 61.2 79 45.6
SalBow8G1303 Salvia bowleyana HOM05D000608 ORTHO05D000444 4.4e-08 61.2 79 44.3
CiPaw.05G241200 Carya illinoinensis HOM05D000608 ORTHO05D000444 7.5e-08 60.5 68 48.5
Ciclev10020420m.g Citrus clementina HOM05D000608 ORTHO05D000444 7.5e-08 60.5 61 49.2
Haze_00647 Corylus avellana HOM05D000608 ORTHO05D000444 7.5e-08 60.5 68 52.9
Lj6A753T57 Lonicera japonica HOM05D000608 ORTHO05D000444 7.5e-08 60.5 72 50.0
Psat1g035280 Pisum sativum HOM05D000608 ORTHO05D000444 7.5e-08 60.5 72 45.8
MSTRG.860 Avicennia marina HOM05D000608 ORTHO05D000444 9.8e-08 60.1 70 50.0
arahy.Tifrunner.gnm1.ann1.VTXV28 Arachis hypogaea HOM05D000240 ORTHO05D002721 1.3e-07 59.7 67 46.3
DCAR_030177 Daucus carota HOM05D000608 ORTHO05D000444 1.3e-07 59.7 55 52.7
FvH4_5g11720 Fragaria vesca HOM05D000608 ORTHO05D000444 1.3e-07 59.7 71 49.3
FAN18G2729 Fragaria x ananassa HOM05D000608 ORTHO05D000444 1.3e-07 59.7 71 49.3
Ca_29867_v3 Cicer arietinum L. HOM05D000608 ORTHO05D000444 1.7e-07 59.3 72 44.4
Ciclev10015520m.g Citrus clementina HOM05D000608 ORTHO05D000444 1.7e-07 59.3 68 48.5
FAN04G1835 Fragaria x ananassa HOM05D000240 ORTHO05D002721 1.7e-07 59.3 71 49.3
PGSC0003DMG400030575 Solanum tuberosum HOM05D000608 ORTHO05D000444 1.7e-07 59.3 79 46.8
TAR426G0008 Trochodendron aralioides HOM05D000608 ORTHO05D000444 1.7e-07 59.3 51 58.8
MBI09_g25165_MAGBIO Magnolia biondii HOM05D000608 ORTHO05D000444 2.2e-07 58.9 63 52.4
vmacro01398 Vaccinium macrocarpon HOM05D000608 ORTHO05D000444 2.2e-07 58.9 70 50.0
Psat6g225080 Pisum sativum HOM05D000608 ORTHO05D000444 2.8e-07 58.5 68 50.0
Potri.008G124000 Populus trichocarpa HOM05D000608 ORTHO05D000444 2.8e-07 58.5 79 44.3
CAN.G610.30 Capsicum annuum HOM05D000608 ORTHO05D000444 3.7e-07 58.2 56 53.6
FAN13G1973 Fragaria x ananassa HOM05D000240 ORTHO05D002721 3.7e-07 58.2 50 58.0
Hma1.2p1_1024F.1_g249123 Hydrangea macrophylla HOM05D000608 ORTHO05D000444 3.7e-07 58.2 68 48.5
Hma1.2p1_3860F.1_g337810 Hydrangea macrophylla HOM05D000608 ORTHO05D000444 3.7e-07 58.2 85 42.4
FAN18G0785 Fragaria x ananassa HOM05D000240 ORTHO05D002721 4.9e-07 57.8 67 50.7
Lj5g0004159 Lotus japonicus HOM05D000608 ORTHO05D000444 4.9e-07 57.8 67 46.3
Prupe.5G224100 Prunus persica HOM05D000608 ORTHO05D000444 4.9e-07 57.8 71 43.7
Hund25039 Selenicereus undatus HOM05D000608 ORTHO05D000444 4.9e-07 57.8 68 47.1
Zm00001eb211200 Zea mays HOM05D000608 ORTHO05D000444 4.9e-07 57.8 57 45.6
Actinidia14920 Actinidia chinensis HOM05D000608 ORTHO05D000444 6.3e-07 57.4 72 44.4
Ca_11129_v3 Cicer arietinum L. HOM05D000608 ORTHO05D000444 6.3e-07 57.4 72 47.2
Haze_18721 Corylus avellana HOM05D000608 ORTHO05D000444 6.3e-07 57.4 67 43.3
TAR371G0302 Trochodendron aralioides HOM05D000608 ORTHO05D000444 6.3e-07 57.4 72 47.2
arahy.Tifrunner.gnm1.ann1.GYJH8K Arachis hypogaea HOM05D000608 ORTHO05D000444 8.3e-07 57.0 66 50.0
Cfa019738 Carpinus fangiana HOM05D000608 ORTHO05D000444 8.3e-07 57.0 68 44.1
Lj3A880T119 Lonicera japonica HOM05D000608 ORTHO05D000444 8.3e-07 57.0 80 45.0
Potri.010G120700 Populus trichocarpa HOM05D000608 ORTHO05D000444 8.3e-07 57.0 79 45.6
Cpa.g.sc65.61 Carica papaya HOM05D000608 ORTHO05D000444 1.1e-06 56.6 70 44.3
Glyma.08G094500 Glycine max HOM05D000608 ORTHO05D000444 1.1e-06 56.6 72 41.7
Lalb_Chr06g0165861 Lupinus albus HOM05D000608 ORTHO05D000444 1.1e-06 56.6 53 52.8
MSTRG.7644 Avicennia marina HOM05D000608 ORTHO05D000444 1.4e-06 56.2 75 45.3
Ca_11585_v3 Cicer arietinum L. HOM05D000608 ORTHO05D000444 1.4e-06 56.2 51 47.1
Thecc.02G223100 Theobroma cacao HOM05D000608 ORTHO05D000444 1.4e-06 56.2 79 43.0
Lalb_Chr02g0145771 Lupinus albus HOM05D000608 ORTHO05D000444 1.8e-06 55.8 73 45.2
Atru.chr11.215 Acer truncatum HOM05D000608 ORTHO05D000444 2.4e-06 55.5 79 39.2
Ah.02g127730 Amaranthus hybridus HOM05D000608 ORTHO05D000444 2.4e-06 55.5 56 48.2
Lalb_Chr22g0353191 Lupinus albus HOM05D000608 ORTHO05D000444 2.4e-06 55.5 72 44.4
ClCG06G014620 Citrullus lanatus HOM05D000608 ORTHO05D000444 3.1e-06 55.1 66 50.0
Prupe.1G316100 Prunus persica HOM05D000608 ORTHO05D000444 3.1e-06 55.1 72 47.2
MBI16_g37132_MAGBIO Magnolia biondii HOM05D000608 ORTHO05D000444 4.1e-06 54.7 73 45.2
MBI16_g41993_MAGBIO Magnolia biondii HOM05D000608 ORTHO05D000444 4.1e-06 54.7 73 45.2
SGA_v2.0_scaffold38G14985 Striga asiatica HOM05D000608 ORTHO05D000444 4.1e-06 54.7 78 43.6
TPR.G5044 Trifolium pratense HOM05D000608 ORTHO05D000444 4.1e-06 54.7 61 42.6
GSVIVG01011848001 Vitis vinifera HOM05D000608 ORTHO05D000444 4.1e-06 54.7 58 51.7
CsaV3_1G003990 Cucumis sativus L. HOM05D000608 ORTHO05D000444 5.4e-06 54.3 67 44.8
CsaV3_5G028810 Cucumis sativus L. HOM05D000608 ORTHO05D000444 5.4e-06 54.3 61 49.2
TWI79G1644 Tripterygium wilfordii HOM05D000608 ORTHO05D000444 5.4e-06 54.3 51 54.9
ClCG01G005880 Citrullus lanatus HOM05D000608 ORTHO05D000444 7.0e-06 53.9 61 49.2
Duzib084G1230 Durio zibethinus HOM05D000608 ORTHO05D000444 7.0e-06 53.9 68 44.1
Lalb_Chr10g0096431 Lupinus albus HOM05D000608 ORTHO05D000444 7.0e-06 53.9 61 47.5
MD13G1035700 Malus domestica HOM05D000608 ORTHO05D000444 7.0e-06 53.9 72 43.1
Sabra10G0090600 Salix brachista HOM05D000608 ORTHO05D000444 7.0e-06 53.9 58 48.3
TPR.G4916 Trifolium pratense HOM05D000608 ORTHO05D000444 7.0e-06 53.9 68 48.5
AL8G22840 Arabidopsis lyrata HOM05D000608 ORTHO05D000444 9.2e-06 53.5 48 54.2
AT5G49220 Arabidopsis thaliana HOM05D000608 ORTHO05D000444 9.2e-06 53.5 48 54.2
HPP92_002016 Vanilla planifolia HOM05D000608 ORTHO05D000444 9.2e-06 53.5 48 52.1


User provided reference genes

Program Settings