Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 3.5e-150 535.0 292 100.0
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 3.5e-81 305.8 249 77.5
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 2.5e-71 273.1 195 73.3
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 2.1e-70 270.0 234 75.6
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 6.8e-69 265.0 196 73.0
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 8.9e-69 264.6 196 73.0
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 1.2e-68 264.2 245 63.7
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 2.0e-68 263.5 240 67.9
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 2.6e-68 263.1 182 74.7
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 2.6e-68 263.1 196 73.5
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 3.4e-68 262.7 181 74.0
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.3e-67 260.8 236 69.5
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.3e-67 260.8 198 72.2
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 1.7e-67 260.4 199 67.8
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 2.2e-67 260.0 184 72.3
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 3.7e-67 259.2 180 73.3
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 3.2e-66 256.1 251 66.9
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 4.1e-66 255.8 229 62.0
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.2e-65 254.2 177 72.9
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 1.2e-65 254.2 194 70.6
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 1.6e-65 253.8 253 62.1
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 2.0e-65 253.4 243 65.8
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 2.0e-65 253.4 173 72.8
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 2.0e-65 253.4 181 71.8
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 2.0e-65 253.4 181 71.8
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 2.7e-65 253.1 187 70.1
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 3.5e-65 252.7 235 63.4
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 4.6e-65 252.3 174 71.8
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 4.6e-65 252.3 231 68.8
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 6.0e-65 251.9 187 68.4
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 1.3e-64 250.8 230 66.5
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 1.7e-64 250.4 174 72.4
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 1.7e-64 250.4 174 73.6
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.7e-64 250.4 241 66.0
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 2.3e-64 250.0 189 68.8
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 3.0e-64 249.6 187 67.4
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 3.9e-64 249.2 183 71.0
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 3.9e-64 249.2 175 73.1
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 3.9e-64 249.2 175 70.9
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 5.0e-64 248.8 174 70.1
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 5.0e-64 248.8 225 61.3
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 5.0e-64 248.8 167 73.7
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 6.6e-64 248.4 235 66.4
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 8.6e-64 248.1 259 58.7
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 8.6e-64 248.1 180 71.7
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 8.6e-64 248.1 180 71.7
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 1.1e-63 247.7 174 71.8
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.9e-63 246.9 164 76.8
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 4.3e-63 245.7 173 71.7
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 5.6e-63 245.4 233 65.2
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 1.2e-62 244.2 164 76.2
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 1.6e-62 243.8 197 68.0
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 3.6e-62 242.7 229 64.6
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 8.1e-62 241.5 193 69.4
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 1.1e-61 241.1 176 69.9
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.1e-61 241.1 225 65.3
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 1.8e-61 240.4 184 66.8
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 2.3e-61 240.0 183 67.2
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 2.3e-61 240.0 183 67.2
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 2.3e-61 240.0 176 69.9
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 2.3e-61 240.0 158 75.3
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 6.8e-61 238.4 183 66.1
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 8.9e-61 238.0 231 63.6
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 1.2e-60 237.7 225 67.1
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 2.6e-60 236.5 134 83.6
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 3.4e-60 236.1 183 66.1
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 3.4e-60 236.1 192 64.6
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 5.8e-60 235.3 174 71.8
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 5.8e-60 235.3 178 70.2
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 7.5e-60 235.0 185 67.6
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 2.2e-59 233.4 192 60.9
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 2.2e-59 233.4 192 60.9
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 2.9e-59 233.0 192 62.0
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 2.9e-59 233.0 192 62.0
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 2.9e-59 233.0 224 65.2
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 3.7e-59 232.6 235 62.6
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 2.4e-58 229.9 160 71.2
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 4.1e-58 229.2 187 65.2
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 5.4e-58 228.8 151 77.5
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 7.1e-58 228.4 161 72.0
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 7.1e-58 228.4 132 82.6
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 1.2e-57 227.6 174 68.4
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 3.5e-57 226.1 177 65.0
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.0e-56 224.6 182 65.4
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 1.2e-54 217.6 196 61.2
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 4.7e-54 215.7 272 54.0
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 1.8e-53 213.8 279 50.9
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 4.0e-53 212.6 202 55.9
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 3.4e-52 209.5 151 68.9
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 2.6e-44 183.3 168 58.9
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 9.9e-44 181.4 181 55.8
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 2.2e-43 180.3 186 57.0
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.4e-42 177.6 153 67.3
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 6.0e-41 172.2 91 89.0
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 6.0e-41 172.2 268 48.9
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 4.3e-39 166.0 185 49.7
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 8.1e-38 161.8 142 64.8
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 8.4e-35 151.8 189 55.6
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 1.9e-34 150.6 198 44.9
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 5.4e-34 149.1 181 50.8
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 7.9e-33 145.2 181 65.2
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 7.9e-33 145.2 181 65.2
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 9.0e-29 131.7 131 55.7
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 4.2e-26 122.9 166 44.0
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 9.6e-23 111.7 103 64.1
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 7.6e-20 102.1 65 80.0
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 1.7e-19 100.9 102 57.8
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 2.9e-19 100.1 106 56.6
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 4.2e-18 96.3 108 45.4
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 2.7e-17 93.6 55 83.6
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 1.2e-09 68.2 37 89.2
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 1.8e-08 64.3 31 80.6
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 2.3e-08 63.9 58 58.6
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 1.1e-07 61.6 108 42.6
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.5e-07 61.2 31 74.2


User provided reference genes

Program Settings