Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 7.2e-312 1073.2 523 100.0
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 1.1e-290 1002.7 523 92.4
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 8.2e-283 976.5 517 91.1
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 8.0e-262 906.7 523 85.9
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 2.0e-252 875.5 520 80.2
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 3.4e-252 874.8 520 80.8
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.3e-251 872.8 523 79.5
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.0e-248 863.2 524 78.1
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.7e-248 862.4 523 79.2
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.3e-247 858.2 554 76.0
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 9.5e-247 856.7 520 78.5
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 6.1e-246 854.0 518 78.2
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 8.0e-246 853.6 520 78.5
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 1.4e-245 852.8 520 79.2
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 1.4e-245 852.8 520 78.7
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 3.0e-245 851.7 520 79.2
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 5.2e-245 850.9 520 77.5
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 2.6e-244 848.6 520 78.7
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 4.4e-244 847.8 520 77.3
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 9.8e-244 846.7 520 77.1
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 3.7e-243 844.7 517 78.1
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 4.9e-243 844.3 520 77.7
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 4.9e-243 844.3 520 77.3
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.9e-243 844.3 520 78.1
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 8.3e-243 843.6 518 77.6
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 1.1e-242 843.2 518 78.4
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.4e-242 842.8 520 78.1
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.8e-242 842.4 519 78.2
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 3.2e-242 841.6 520 78.1
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 4.1e-242 841.3 519 78.0
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 1.2e-241 839.7 518 77.4
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.7e-241 838.6 518 78.0
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 3.5e-241 838.2 544 73.9
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 7.8e-241 837.0 520 77.3
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 2.3e-240 835.5 520 76.3
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 2.3e-240 835.5 518 76.8
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 3.0e-240 835.1 516 76.7
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 6.6e-240 833.9 518 76.6
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.9e-239 832.4 520 76.3
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 3.3e-239 831.6 520 76.2
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 9.5e-239 830.1 520 76.9
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 2.8e-238 828.6 521 77.2
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 2.8e-238 828.6 517 77.4
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 2.8e-238 828.6 520 76.7
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 3.6e-238 828.2 517 77.4
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.6e-238 828.2 522 75.9
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 3.6e-238 828.2 520 76.9
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 4.7e-238 827.8 520 76.9
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 4.7e-238 827.8 517 76.6
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.0e-238 827.0 522 75.9
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 1.4e-237 826.2 544 74.3
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 1.4e-237 826.2 518 76.4
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.8e-237 825.9 521 76.2
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.3e-237 825.5 522 75.9
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.3e-237 825.5 522 75.7
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 2.3e-237 825.5 520 75.4
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 5.2e-237 824.3 521 75.8
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 5.2e-237 824.3 519 76.1
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 8.9e-237 823.5 521 75.4
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 3.4e-236 821.6 519 76.7
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 4.4e-236 821.2 516 76.4
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 4.4e-236 821.2 530 74.5
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 7.5e-236 820.5 520 76.2
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 9.8e-236 820.1 521 74.9
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 9.8e-236 820.1 519 75.1
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 3.7e-235 818.1 521 75.4
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 4.9e-235 817.8 521 75.6
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.3e-235 817.0 520 76.0
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 8.3e-235 817.0 520 74.6
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 1.1e-234 816.6 520 75.0
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 2.4e-234 815.5 513 76.4
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 1.6e-233 812.8 521 73.9
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 1.6e-233 812.8 521 73.9
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.0e-233 812.4 530 74.7
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 6.0e-233 810.8 521 73.9
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 6.0e-233 810.8 521 73.7
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 1.0e-232 810.1 521 73.5
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 1.3e-232 809.7 521 73.5
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.7e-232 809.3 466 82.2
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.7e-232 809.3 520 74.2
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 2.3e-232 808.9 526 72.8
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 3.9e-232 808.1 518 73.9
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 3.9e-232 808.1 518 73.9
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 6.6e-232 807.4 520 73.7
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 6.6e-232 807.4 521 74.3
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 1.5e-231 806.2 520 73.3
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 1.9e-231 805.8 519 74.0
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.9e-231 805.8 520 74.2
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 9.5e-231 803.5 520 73.5
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 9.5e-231 803.5 520 73.5
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 1.6e-230 802.7 514 74.1
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 2.1e-230 802.4 520 73.1
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 2.1e-230 802.4 523 73.0
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 6.2e-230 800.8 521 72.6
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 1.8e-229 799.3 519 73.8
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 1.8e-229 799.3 521 72.9
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 8.9e-229 797.0 523 72.8
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 8.9e-229 797.0 523 74.0
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 2.0e-228 795.8 519 74.0
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 2.6e-228 795.4 521 72.9
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 4.4e-228 794.7 522 73.0
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 4.9e-227 791.2 470 79.1
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 3.2e-226 788.5 493 76.9
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 1.6e-225 786.2 466 80.5
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 7.8e-225 783.9 476 78.6
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 3.9e-224 781.6 520 73.3
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 8.6e-224 780.4 521 73.5
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 2.8e-222 775.4 520 72.7
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 3.6e-222 775.0 469 78.3
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.1e-221 773.5 514 73.0
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 1.1e-221 773.5 524 71.2
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 2.3e-221 772.3 520 73.3
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 3.1e-221 771.9 519 72.3
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 6.8e-221 770.8 516 72.5
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 2.0e-220 769.2 520 72.7
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 2.6e-220 768.8 519 71.7
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 3.4e-220 768.5 524 70.4
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 2.9e-219 765.4 520 73.1
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 4.9e-219 764.6 516 71.1
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 6.4e-219 764.2 550 69.1
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 4.1e-218 761.5 516 70.5
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 7.1e-218 760.8 519 70.1
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 2.1e-217 759.2 473 75.3
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 2.7e-217 758.8 521 70.1
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 4.6e-217 758.1 463 77.8
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 3.9e-216 755.0 520 72.1
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 1.5e-215 753.1 467 75.6
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.5e-215 752.3 576 65.8
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 5.2e-213 744.6 520 69.2
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 1.2e-212 743.4 520 69.4
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 7.6e-212 740.7 553 66.7
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 9.9e-212 740.3 519 69.2
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 4.9e-211 738.0 519 69.0
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 4.9e-211 738.0 561 67.6
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 4.6e-209 731.5 518 68.3
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.7e-208 729.6 490 72.2
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 1.9e-202 709.5 520 66.9
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 3.2e-202 708.8 520 66.9
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 4.6e-201 704.9 480 71.7
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 3.0e-200 702.2 540 65.7
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 7.4e-199 697.6 503 71.4
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 4.6e-193 678.3 529 64.8
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 6.3e-182 641.3 380 80.3
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 1.0e-179 634.0 370 80.8
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 1.2e-172 610.5 383 77.5
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 5.9e-172 608.2 494 60.1
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 2.5e-170 602.8 448 62.5
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 3.9e-168 595.5 481 63.6
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 3.9e-168 595.5 562 56.9
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 2.7e-161 572.8 472 58.7
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 3.3e-151 539.3 519 53.0
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 6.1e-145 518.5 345 74.5
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.5e-127 460.7 265 80.4
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 2.0e-127 460.3 288 79.2
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 2.4e-125 453.4 291 75.9
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 3.2e-125 453.0 292 71.6
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 1.1e-122 444.5 289 76.1
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 3.4e-119 433.0 293 71.7
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.5e-106 390.2 250 72.4
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 6.9e-88 328.9 244 66.0
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.6e-81 307.8 207 70.5
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 7.4e-58 229.2 439 33.9
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 2.9e-54 217.2 131 73.3
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 1.1e-53 215.3 478 31.4
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.5e-39 167.2 206 46.6
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 9.4e-37 159.1 109 70.6
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 1.3e-33 148.7 142 51.4
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 5.4e-24 116.7 86 68.6
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 2.1e-20 104.8 58 79.3
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 8.0e-20 102.8 143 49.0
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 4.0e-19 100.5 60 76.7
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 4.9e-17 93.6 149 36.9
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.3e-13 80.5 167 37.7
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 1.9e-08 65.1 55 61.8
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 2.4e-08 64.7 76 46.1
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 6.6e-06 56.6 37 64.9


User provided reference genes

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