Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 9.8e-152 540.0 262 100.0
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.4e-134 482.3 262 88.9
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 7.1e-126 454.1 262 81.7
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 2.7e-125 452.2 258 86.4
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 6.0e-125 451.1 259 83.4
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 1.3e-124 449.9 258 84.1
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.9e-124 448.4 258 83.7
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 8.7e-124 447.2 258 83.7
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 7.3e-123 444.1 258 82.2
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 1.6e-122 443.0 258 82.9
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 2.1e-122 442.6 258 82.2
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 6.2e-122 441.0 258 81.8
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 8.1e-122 440.7 258 82.9
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 1.1e-121 440.3 258 81.4
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 2.4e-121 439.1 256 81.2
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 5.3e-121 438.0 258 81.4
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 1.2e-120 436.8 258 81.0
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 1.5e-120 436.4 258 80.6
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 3.4e-120 435.3 251 82.1
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 5.8e-120 434.5 258 81.0
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 7.6e-120 434.1 258 80.6
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 1.7e-119 433.0 258 80.2
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 2.2e-119 432.6 262 79.8
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 2.9e-119 432.2 258 79.5
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 6.4e-119 431.0 258 79.5
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 1.1e-118 430.3 262 78.2
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 1.1e-118 430.3 262 78.2
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 1.1e-118 430.3 249 81.1
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.9e-118 429.5 257 82.1
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.9e-118 429.5 261 80.8
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 1.9e-118 429.5 258 79.8
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 1.9e-118 429.5 257 79.4
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 1.9e-118 429.5 257 79.4
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 2.4e-118 429.1 258 78.3
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 4.2e-118 428.3 257 79.4
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 4.2e-118 428.3 258 80.2
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 7.1e-118 427.6 258 79.5
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 1.2e-117 426.8 259 79.2
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.2e-117 426.8 258 79.5
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.6e-117 426.4 257 78.6
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 1.6e-117 426.4 249 80.3
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 2.1e-117 426.0 258 79.5
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 3.5e-117 425.2 257 79.8
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 3.5e-117 425.2 258 78.7
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 4.6e-117 424.9 257 79.8
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 4.6e-117 424.9 258 79.8
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 7.9e-117 424.1 272 76.5
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 1.0e-116 423.7 258 79.5
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 1.0e-116 423.7 258 79.5
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.0e-116 423.7 258 79.5
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.3e-116 423.3 258 79.1
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.3e-116 423.3 258 79.1
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.3e-116 423.3 258 79.1
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.3e-116 423.3 258 79.1
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.3e-116 423.3 258 79.1
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.3e-116 423.3 249 81.5
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 1.3e-116 423.3 258 78.7
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 3.0e-116 422.2 263 77.6
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 3.0e-116 422.2 258 79.1
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 3.9e-116 421.8 257 79.4
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 3.9e-116 421.8 257 79.4
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 5.1e-116 421.4 257 78.2
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.5e-115 419.9 257 78.6
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 1.5e-115 419.9 258 78.3
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 2.5e-115 419.1 258 78.7
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 3.3e-115 418.7 257 78.6
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 4.3e-115 418.3 257 78.2
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 9.6e-115 417.2 256 79.3
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 9.6e-115 417.2 257 77.8
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 2.8e-114 415.6 258 76.7
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 2.8e-114 415.6 258 77.9
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.8e-114 415.6 258 77.9
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.8e-114 415.6 258 77.9
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 2.8e-114 415.6 258 78.3
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 3.7e-114 415.2 258 78.7
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 1.1e-113 413.7 258 78.3
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 1.1e-113 413.7 258 77.9
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.1e-113 412.1 258 77.5
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 4.0e-113 411.8 258 77.1
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 4.0e-113 411.8 256 77.7
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 5.3e-113 411.4 258 79.1
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 5.3e-113 411.4 258 79.1
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 5.3e-113 411.4 258 79.1
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 6.9e-113 411.0 258 76.7
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 1.5e-112 409.8 303 68.0
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.4e-112 408.7 258 77.1
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.4e-112 408.7 258 77.1
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 1.3e-111 406.8 258 77.5
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 9.3e-110 400.6 231 82.7
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.2e-109 400.2 257 75.9
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 6.0e-109 397.9 258 74.8
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 8.7e-108 394.0 257 75.1
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 3.7e-106 388.7 250 75.2
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 5.8e-104 381.3 258 73.3
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 8.4e-103 377.5 215 82.3
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.5e-102 375.9 250 71.6
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.7e-101 372.5 274 70.1
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 2.8e-98 362.5 231 72.3
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 5.3e-97 358.2 216 79.2
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 3.8e-95 352.1 216 76.4
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 5.0e-95 351.7 260 68.5
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 1.4e-94 350.1 257 70.0
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 3.2e-94 349.0 258 69.0
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 4.3e-91 338.6 251 64.5
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 1.3e-90 337.0 247 65.2
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 8.2e-90 334.3 250 63.6
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.2e-87 326.2 199 78.4
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.8e-84 316.6 201 74.6
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 3.0e-84 315.8 251 61.8
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 6.5e-71 271.6 166 78.3
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 1.0e-68 264.2 171 74.9
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.7e-63 246.9 154 77.3
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 1.1e-62 244.2 133 87.2
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 1.6e-61 240.4 255 50.2
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 4.0e-60 235.7 247 47.4
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 5.9e-56 221.9 156 68.6
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 4.7e-53 212.2 143 70.6
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.8e-52 210.3 112 89.3
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 3.0e-52 209.5 199 58.3
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 2.0e-51 206.8 273 41.4
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 7.5e-51 204.9 117 80.3
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 3.5e-48 196.1 105 87.6
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 1.3e-47 194.1 131 71.0
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 2.9e-47 193.0 105 87.6
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 6.8e-44 181.8 105 81.0
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 4.9e-42 175.6 258 43.0
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 9.2e-41 171.4 115 71.3
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.7e-40 169.9 105 79.0
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 4.3e-38 162.5 91 79.1
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 8.3e-34 148.3 104 69.2
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 4.1e-33 146.0 117 62.4
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.6e-27 126.7 102 61.8
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 3.7e-26 122.9 67 88.1
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.3e-22 109.8 97 62.9
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 1.2e-16 91.3 60 68.3
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 4.6e-16 89.4 55 78.2
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 2.4e-12 77.0 60 68.3
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 5.4e-09 65.9 40 80.0


User provided reference genes

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