Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0320411 Helianthus annuus HOM05D003913 ORTHO05D004803 1.6e-105 387.1 393 100.0
Lsat_1_v5_gn_9_43060 Lactuca sativa HOM05D003913 ORTHO05D004803 8.3e-78 295.0 393 85.0
ECA232G2276 Erigeron canadensis HOM05D003913 ORTHO05D004803 2.4e-77 293.5 393 83.7
Dinv13071 Davidia involucrata HOM05D003913 ORTHO05D004803 2.7e-68 263.5 393 53.9
CSS0047372 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 5.0e-67 259.2 396 80.8
Dinv44716 Davidia involucrata HOM05D003913 ORTHO05D004803 1.6e-65 254.2 393 55.5
Nn3g16733 Nelumbo nucifera HOM05D003913 ORTHO05D004803 1.3e-62 244.6 388 79.1
PGR031G2719 Punica granatum HOM05D003913 ORTHO05D004803 6.4e-62 242.3 392 71.7
Lalb_Chr20g0121511 Lupinus albus HOM05D003913 ORTHO05D004803 8.3e-62 241.9 381 47.5
Oeu053831.1 Olea europaea HOM05D003913 ORTHO05D004803 1.8e-61 240.7 384 72.7
Potri.019G087200 Populus trichocarpa HOM05D003913 ORTHO05D004803 4.1e-61 239.6 385 73.2
ECA236G4407 Erigeron canadensis HOM05D003913 ORTHO05D004803 1.3e-59 234.6 379 47.2
Rhsim04G0038100 Rhododendron simsii HOM05D003913 ORTHO05D004803 1.3e-59 234.6 414 74.2
RcHm_v2.0_Chr6g0272901 Rosa chinensis HOM05D003913 ORTHO05D004803 3.9e-59 233.0 386 78.8
FAN24G0738 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.1e-58 231.5 387 80.1
FvH4_2g12470 Fragaria vesca HOM05D003913 ORTHO05D004803 1.5e-58 231.1 387 79.6
THA.LOC104826775 Tarenaya hassleriana HOM05D003913 ORTHO05D004803 2.5e-58 230.3 396 71.7
CDE08G0059 Ceratophyllum demersum HOM05D003913 ORTHO05D004803 1.6e-57 227.6 385 70.6
AL2G31420 Arabidopsis lyrata HOM05D003913 ORTHO05D004803 2.1e-57 227.3 395 68.4
TAR625G1217 Trochodendron aralioides HOM05D003913 ORTHO05D004803 2.1e-57 227.3 388 75.5
Lj4A109T49 Lonicera japonica HOM05D003913 ORTHO05D004803 2.8e-57 226.9 393 74.0
Lj5g0008809 Lotus japonicus HOM05D003913 ORTHO05D004803 2.8e-57 226.9 388 41.2
TWI12G0147 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 3.6e-57 226.5 392 75.3
CsaV3_6G002750 Cucumis sativus L. HOM05D003913 ORTHO05D004803 8.0e-57 225.3 393 70.5
TWI75G1061 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 1.4e-56 224.6 388 76.3
BcaC08g46615 Brassica carinata HOM05D003913 ORTHO05D004803 1.8e-56 224.2 389 68.9
Prupe.8G049100 Prunus persica HOM05D003913 ORTHO05D004803 1.8e-56 224.2 385 71.9
ClCG08G002560 Citrullus lanatus HOM05D003913 ORTHO05D004803 2.3e-56 223.8 385 71.4
Sed0012824 Sechium edule HOM05D003913 ORTHO05D004803 2.3e-56 223.8 387 63.3
FvH4_5g22350 Fragaria vesca HOM05D003913 ORTHO05D004803 3.1e-56 223.4 382 72.3
FAN18G2025 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.1e-56 223.4 382 72.3
FAN18G2798 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.1e-56 223.4 382 72.3
Manes.02G188000 Manihot esculenta HOM05D003913 ORTHO05D004803 4.0e-56 223.0 393 69.5
Thhalv10018505m.g Eutrema salsugineum HOM05D003913 ORTHO05D004803 5.2e-56 222.6 385 71.2
BcaC08g45753 Brassica carinata HOM05D003913 ORTHO05D004803 1.2e-55 221.5 397 69.0
C06p45910 Brassica napus HOM05D003913 ORTHO05D004803 1.2e-55 221.5 382 69.6
FAN08G0696 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.2e-55 221.5 382 72.0
Glyma.20G173100 Glycine max HOM05D003913 ORTHO05D004803 1.2e-55 221.5 384 52.1
MELO3C024997.2 Cucumis melo HOM05D003913 ORTHO05D004803 1.5e-55 221.1 393 70.0
BcaB03g15621 Brassica carinata HOM05D003913 ORTHO05D004803 2.0e-55 220.7 397 65.5
CARHR290910 Cardamine hirsuta HOM05D003913 ORTHO05D004803 2.0e-55 220.7 394 63.7
LjContig00222g0022410 Lotus japonicus HOM05D003913 ORTHO05D004803 2.0e-55 220.7 388 44.6
CiPaw.15G007000 Carya illinoinensis HOM05D003913 ORTHO05D004803 3.4e-55 219.9 385 66.8
Aa31LG4G8790 Aethionema arabicum HOM05D003913 ORTHO05D004803 4.4e-55 219.5 409 66.5
PSO675G8150 Papaver somniferum HOM05D003913 ORTHO05D004803 7.5e-55 218.8 401 75.6
AT1G71840 Arabidopsis thaliana HOM05D003913 ORTHO05D004803 9.8e-55 218.4 395 68.1
RcHm_v2.0_Chr7g0210071 Rosa chinensis HOM05D003913 ORTHO05D004803 9.8e-55 218.4 382 72.0
Actinidia29569 Actinidia chinensis HOM05D003913 ORTHO05D004803 1.3e-54 218.0 392 70.4
SalBow7G2889 Salvia bowleyana HOM05D003913 ORTHO05D004803 1.3e-54 218.0 393 62.6
Sp5g26870 Schrenkiella parvula HOM05D003913 ORTHO05D004803 3.7e-54 216.5 395 67.6
SpUn0020_0100 Schrenkiella parvula HOM05D003913 ORTHO05D004803 3.7e-54 216.5 395 67.6
Lj2C196T3 Lonicera japonica HOM05D003913 ORTHO05D004803 4.9e-54 216.1 393 48.3
Ca_30575_v3 Cicer arietinum L. HOM05D003913 ORTHO05D004803 1.9e-53 214.2 392 42.6
BolC6t38638H Brassica oleracea HOM05D003913 ORTHO05D004803 2.4e-53 213.8 407 51.1
BraA07t30691Z Brassica rapa HOM05D003913 ORTHO05D004803 2.4e-53 213.8 407 60.4
Phvul.011G104600 Phaseolus vulgaris HOM05D003913 ORTHO05D004803 4.1e-53 213.0 390 57.2
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 1.2e-52 211.5 384 39.6
Nitab4.5_0002890g0020 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.2e-52 211.5 348 49.4
Sed0004416 Sechium edule HOM05D003913 ORTHO05D004803 1.2e-52 211.5 393 68.4
A07p37990 Brassica napus HOM05D003913 ORTHO05D004803 1.6e-52 211.1 396 62.9
Cc11_g02860 Coffea canephora HOM05D003913 ORTHO05D004803 3.5e-52 209.9 386 68.9
A07p30560 Brassica napus HOM05D003913 ORTHO05D004803 4.6e-52 209.5 421 46.1
C06p35320 Brassica napus HOM05D003913 ORTHO05D004803 1.0e-51 208.4 421 58.9
GSVIVG01015205001 Vitis vinifera HOM05D003913 ORTHO05D004803 1.0e-51 208.4 397 57.7
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 1.7e-51 207.6 384 40.1
DCAR_000644 Daucus carota HOM05D003913 ORTHO05D004803 2.3e-51 207.2 384 49.7
Nitab4.5_0000366g0190 Nicotiana tabacum HOM05D003913 ORTHO05D004803 2.3e-51 207.2 345 73.9
EL10Ac6g15251 Beta vulgaris HOM05D003913 ORTHO05D004803 3.9e-51 206.5 397 76.3
Ciclev10008663m.g Citrus clementina HOM05D003913 ORTHO05D004803 3.9e-51 206.5 385 68.3
Aqoxy1G00206 Aquilegia oxysepala HOM05D003913 ORTHO05D004803 5.0e-51 206.1 389 64.5
MBI10_g42737_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 1.5e-50 204.5 345 80.9
ATR0001G003 Amborella trichopoda HOM05D003913 ORTHO05D004803 1.9e-50 204.1 343 52.5
Sabra19G0101300 Salix brachista HOM05D003913 ORTHO05D004803 3.3e-50 203.4 391 77.5
PSO541G3150 Papaver somniferum HOM05D003913 ORTHO05D004803 4.3e-50 203.0 362 72.7
VMungo1080G1176 Vigna mungo HOM05D003913 ORTHO05D004803 4.3e-50 203.0 390 51.5
MD02G1272000 Malus domestica HOM05D003913 ORTHO05D004803 5.6e-50 202.6 385 71.2
PGSC0003DMG400028735 Solanum tuberosum HOM05D003913 ORTHO05D004803 5.6e-50 202.6 389 70.4
CANSAT25G1043 Cannabis sativa HOM05D003913 ORTHO05D004803 2.1e-49 200.7 393 67.7
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 2.1e-49 200.7 416 58.7
MD07G1041000 Malus domestica HOM05D003913 ORTHO05D004803 3.6e-49 199.9 397 67.8
BolC6t39643H Brassica oleracea HOM05D003913 ORTHO05D004803 4.7e-49 199.5 386 66.8
BraA07t31364Z Brassica rapa HOM05D003913 ORTHO05D004803 1.1e-48 198.4 386 67.4
Hund19608 Selenicereus undatus HOM05D003913 ORTHO05D004803 1.4e-48 198.0 431 63.1
Rhsim06G0087400 Rhododendron simsii HOM05D003913 ORTHO05D004803 2.3e-48 197.2 344 81.1
Gorai.006G187200 Gossypium raimondii HOM05D003913 ORTHO05D004803 3.1e-48 196.8 397 40.1
Gohir.D09G165400 Gossypium hirsutum HOM05D003913 ORTHO05D004803 6.8e-48 195.7 397 39.8
Sopen07g004790 Solanum pennellii HOM05D003913 ORTHO05D004803 1.5e-47 194.5 389 69.9
VMungo0720G0336 Vigna mungo HOM05D003913 ORTHO05D004803 2.0e-47 194.1 392 53.3
Sc16g0003970 Simmondsia chinensis HOM05D003913 ORTHO05D004803 5.8e-47 192.6 338 79.3
Solyc07g008860.3 Solanum lycopersicum HOM05D003913 ORTHO05D004803 7.5e-47 192.2 389 69.4
Zm00001eb362180 Zea mays HOM05D003913 ORTHO05D004803 2.2e-46 190.7 390 56.2
Sabra19G0097800 Salix brachista HOM05D003913 ORTHO05D004803 4.9e-46 189.5 391 75.7
GSVIVG01001592001 Vitis vinifera HOM05D003913 ORTHO05D004803 4.9e-46 189.5 388 72.7
HPP92_008098 Vanilla planifolia HOM05D003913 ORTHO05D004803 6.4e-46 189.1 394 69.0
Gohir.A09G169700 Gossypium hirsutum HOM05D003913 ORTHO05D004803 8.3e-46 188.7 396 44.2
Oeu053830.1 Olea europaea HOM05D003913 ORTHO05D004803 3.2e-45 186.8 382 67.8
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 4.1e-45 186.4 369 34.1
Atru.chr13.1880 Acer truncatum HOM05D003913 ORTHO05D004803 2.1e-44 184.1 388 66.8
Hma1.2p1_0276F.1_g111300 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 2.1e-44 184.1 313 78.3
TPR.G30584 Trifolium pratense HOM05D003913 ORTHO05D004803 2.7e-44 183.7 398 42.0
Zm00001eb139680 Zea mays HOM05D003913 ORTHO05D004803 3.5e-44 183.3 389 66.1
Os03g0685600 Oryza sativa ssp. japonica HOM05D003913 ORTHO05D004803 6.0e-44 182.6 389 59.9
Sabra13G0099000 Salix brachista HOM05D003913 ORTHO05D004803 6.0e-44 182.6 388 67.0
AUR62017935 Chenopodium quinoa HOM05D003913 ORTHO05D004803 1.7e-43 181.0 396 64.1
Gohir.D06G113300 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.7e-43 181.0 394 43.4
Gorai.010G129100 Gossypium raimondii HOM05D003913 ORTHO05D004803 1.7e-43 181.0 394 43.1
Potri.013G116900 Populus trichocarpa HOM05D003913 ORTHO05D004803 2.3e-43 180.6 392 58.7
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 8.6e-43 178.7 378 34.9
Cfa018220 Carpinus fangiana HOM05D003913 ORTHO05D004803 5.6e-42 176.0 341 74.2
Nitab4.5_0002890g0010 Nicotiana tabacum HOM05D003913 ORTHO05D004803 9.5e-42 175.3 328 46.6
Migut.J01123 Erythranthe guttata HOM05D003913 ORTHO05D004803 6.2e-41 172.6 396 44.2
Carub.0002s1860 Capsella rubella HOM05D003913 ORTHO05D004803 1.1e-40 171.8 395 63.8
MSTRG.9615 Avicennia marina HOM05D003913 ORTHO05D004803 1.8e-40 171.0 392 61.5
FAN20G2057 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.1e-40 170.2 309 60.5
SEGI_39165 Sequoiadendron giganteum HOM05D003913 ORTHO05D004803 6.8e-40 169.1 385 65.2
Ah.03g146560 Amaranthus hybridus HOM05D003913 ORTHO05D004803 9.9e-39 165.2 384 65.6
DCAR_004603 Daucus carota HOM05D000366 ORTHO05D000437 2.2e-38 164.1 280 82.1
Aa31LG7G6630 Aethionema arabicum HOM05D003913 ORTHO05D004803 6.4e-38 162.5 402 30.3
unitig_747.g21315 Utricularia gibba HOM05D003913 ORTHO05D004803 1.1e-37 161.8 384 39.8
MBI10_g41322_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 5.4e-37 159.5 116 68.1
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 9.2e-37 158.7 113 71.7
Duzib211G0424 Durio zibethinus HOM05D003913 ORTHO05D004803 9.2e-37 158.7 400 45.2
arahy.Tifrunner.gnm1.ann1.A7TGXU Arachis hypogaea HOM05D003913 ORTHO05D004803 1.2e-36 158.3 412 33.3
SGA_v2.0_scaffold114G31919 Striga asiatica HOM05D003913 ORTHO05D004803 4.6e-36 156.4 343 62.1
Thecc.08G198300 Theobroma cacao HOM05D003913 ORTHO05D004803 1.0e-35 155.2 400 35.8
TAR381G0993 Trochodendron aralioides HOM05D003913 ORTHO05D004803 1.0e-35 155.2 114 70.2
Cpa.g.sc2399.1 Carica papaya HOM05D003913 ORTHO05D004803 6.6e-35 152.5 114 65.8
Gohir.A06G109200 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.1e-34 151.8 361 36.8
CANSAT11G1897 Cannabis sativa HOM05D003913 ORTHO05D004803 1.5e-34 151.4 107 70.1
QL02p034830 Quercus lobata HOM05D003913 ORTHO05D004803 3.6e-33 146.7 103 70.9
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 4.7e-33 146.4 394 29.9
Migut.D01748 Erythranthe guttata HOM05D003913 ORTHO05D004803 6.2e-33 146.0 344 68.6
Eucgr.E02330 Eucalyptus grandis HOM05D003913 ORTHO05D004803 1.1e-32 145.2 282 75.5
COL.COLO4_03395 Corchorus olitorius HOM05D003913 ORTHO05D004803 5.2e-32 142.9 116 64.7
EL10Ac9g21859 Beta vulgaris HOM05D003913 ORTHO05D004803 5.8e-31 139.4 330 36.4
Glyma.10G218600 Glycine max HOM05D003913 ORTHO05D004803 9.9e-31 138.7 111 61.3
Migut.I00088 Erythranthe guttata HOM05D003913 ORTHO05D004803 1.7e-30 137.9 409 41.3
AUR62003626 Chenopodium quinoa HOM05D003913 ORTHO05D004803 2.2e-30 137.5 108 59.3
Psat6g019720 Pisum sativum HOM05D003913 ORTHO05D004803 2.7e-28 130.6 111 58.6
Peaxi162Scf01838g00003 Petunia axillaris HOM05D000173 ORTHO05D000316 6.0e-28 129.4 110 66.4
AagrBONN_evm.TU.Sc2ySwM_368.376 Anthoceros agrestis HOM05D003913 ORTHO05D004803 7.8e-28 129.0 400 58.0
COL.COLO4_13734 Corchorus olitorius HOM05D003913 ORTHO05D004803 1.0e-27 128.6 337 38.9
Haze_17883 Corylus avellana HOM05D003913 ORTHO05D004803 8.7e-27 125.6 484 56.2
CARHR124080 Cardamine hirsuta HOM05D003913 ORTHO05D004803 1.5e-26 124.8 371 28.0
SMO347G0114 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 1.5e-26 124.8 395 42.3
Pp3c14_20020 Physcomitrium patens HOM05D003913 ORTHO05D004803 1.6e-25 121.3 397 55.7
AUR62024845 Chenopodium quinoa HOM05D003913 ORTHO05D004803 1.1e-24 118.6 385 27.0
Hma1.2p1_0276F.1_g111310 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 1.4e-24 118.2 125 52.8
AUR62001664 Chenopodium quinoa HOM05D003913 ORTHO05D004803 2.0e-23 114.4 345 26.7
PSO455G0073 Papaver somniferum HOM05D003913 ORTHO05D004803 1.3e-22 111.7 62 82.3
Glyma.09G057500 Glycine max HOM05D003913 ORTHO05D004803 4.9e-22 109.8 174 36.2
vmacro21210 Vaccinium macrocarpon HOM05D003913 ORTHO05D004803 1.1e-21 108.6 414 55.1
Glyma.10G218500 Glycine max HOM05D003913 ORTHO05D004803 9.3e-21 105.5 124 44.4
Mapoly0155s0005 Marchantia polymorpha HOM05D003913 ORTHO05D004803 1.6e-20 104.8 396 30.1
Lj4C56G20 Lonicera japonica HOM05D003913 ORTHO05D004803 3.9e-19 100.1 57 80.7
Psat6g021120 Pisum sativum HOM05D003913 ORTHO05D004803 9.6e-18 95.5 120 44.2
Medtr7g079470 Medicago truncatula HOM05D003913 ORTHO05D004803 2.4e-16 90.9 63 68.3
SMO367G0065 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 5.3e-16 89.7 372 25.5
SMO343G0013 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 6.9e-16 89.4 113 43.4
SHI13909 Sapria himalayana HOM05D003913 ORTHO05D004803 9.0e-16 89.0 96 50.0
Thecc.09G236800 Theobroma cacao HOM05D003913 ORTHO05D004803 7.6e-15 85.9 54 72.2
BraA02t06789Z Brassica rapa HOM05D003913 ORTHO05D004803 2.2e-14 84.3 54 70.4
A02p17440 Brassica napus HOM05D003913 ORTHO05D004803 8.4e-14 82.4 54 68.5
Glyma.17G173200 Glycine max HOM05D003913 ORTHO05D004803 3.5e-12 77.0 42 76.2
Medtr7g111550 Medicago truncatula HOM05D003913 ORTHO05D004803 3.5e-12 77.0 105 41.9
BolC6t38649H Brassica oleracea HOM05D003913 ORTHO05D004803 1.3e-11 75.1 112 39.3
MCO10G384 Micromonas commoda HOM05D003913 ORTHO05D004803 8.7e-11 72.4 122 32.8
CBR_g49506 Chara braunii HOM05D003913 ORTHO05D004803 1.5e-10 71.6 391 58.1
Cre12.g487200 Chlamydomonas reinhardtii HOM05D003913 ORTHO05D004803 2.1e-09 67.8 400 26.8


User provided reference genes

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