Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 0.0e+00 1091.6 552 100.0
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.8e-150 537.0 600 56.3
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 6.5e-145 518.5 600 54.7
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 4.8e-108 396.0 695 40.7
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.7e-106 390.2 673 42.2
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 5.2e-102 375.9 688 39.5
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.2e-101 374.8 661 40.4
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 2.0e-101 374.0 661 40.7
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 4.4e-101 372.9 590 43.4
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 1.3e-100 371.3 670 41.5
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 3.7e-100 369.8 668 40.0
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 3.7e-100 369.8 671 40.4
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 1.1e-99 368.2 708 38.0
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 1.6e-98 364.4 671 40.1
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 1.3e-97 361.3 663 42.2
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 2.9e-97 360.1 650 41.2
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 4.2e-96 356.3 637 41.9
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 5.5e-96 355.9 640 41.4
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.2e-95 354.8 681 40.1
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.6e-95 354.4 660 39.8
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 2.1e-95 354.0 646 40.2
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 6.1e-95 352.4 663 38.5
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 3.0e-94 350.1 668 38.8
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 6.8e-94 349.0 641 41.5
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 2.0e-93 347.4 676 38.6
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 2.0e-93 347.4 664 38.9
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 3.4e-93 346.7 665 38.6
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 1.7e-92 344.4 655 40.2
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.1e-91 340.1 638 40.1
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 5.9e-90 335.9 668 37.9
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 5.9e-90 335.9 657 37.9
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 5.9e-90 335.9 674 37.5
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 7.7e-90 335.5 653 39.2
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 1.0e-89 335.1 660 39.4
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 2.9e-89 333.6 673 37.4
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 1.1e-88 331.6 651 37.6
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.5e-88 331.3 662 38.1
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 2.5e-88 330.5 685 36.9
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 2.1e-87 327.4 643 39.2
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 3.6e-87 326.6 660 39.2
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 3.6e-87 326.6 672 39.6
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 8.0e-87 325.5 663 38.3
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 1.0e-86 325.1 573 39.8
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 4.0e-86 323.2 633 37.4
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 6.8e-86 322.4 651 38.2
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 7.5e-85 318.9 587 39.2
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.3e-84 318.2 626 39.3
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 6.4e-84 315.8 697 35.9
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.8e-83 314.3 596 37.4
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 5.4e-83 312.8 575 39.1
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 2.7e-82 310.5 542 40.2
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 3.5e-82 310.1 499 42.7
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 4.6e-82 309.7 581 38.2
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 2.3e-81 307.4 594 38.0
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 3.6e-79 300.1 493 43.8
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 1.4e-78 298.1 659 38.1
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 1.8e-78 297.7 624 35.3
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 2.3e-78 297.4 728 34.2
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 6.8e-78 295.8 629 36.4
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 4.4e-77 293.1 549 39.3
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 1.3e-76 291.6 676 36.2
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.7e-76 291.2 493 42.0
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.4e-75 288.1 642 36.4
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.9e-75 287.7 498 40.6
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 4.1e-75 286.6 584 38.4
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.5e-72 278.1 453 43.7
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.5e-72 278.1 661 36.6
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 7.3e-72 275.8 489 39.1
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 4.4e-69 266.5 655 33.9
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 3.7e-68 263.5 468 40.2
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 8.3e-68 262.3 468 40.2
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 1.1e-67 261.9 483 38.7
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 5.4e-67 259.6 473 38.5
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 9.2e-67 258.8 460 39.1
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 3.5e-66 256.9 360 47.5
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 6.6e-65 252.7 708 31.9
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 3.6e-63 246.9 395 42.0
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 3.1e-62 243.8 616 33.4
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 1.3e-60 238.4 575 33.2
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 4.6e-58 229.9 595 33.1
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 2.3e-57 227.6 325 43.7
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 8.6e-57 225.7 390 41.5
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 8.6e-57 225.7 595 31.8
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 4.2e-51 206.8 383 38.9
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 1.0e-49 202.2 494 34.2
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 2.3e-49 201.1 353 41.1
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 3.3e-48 197.2 321 40.8
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 6.4e-44 183.0 219 49.3
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.0e-41 175.6 354 35.9
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 3.3e-40 170.6 352 37.8
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.8e-39 167.5 361 34.9
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 2.4e-38 164.5 324 37.3
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 1.3e-36 158.7 201 47.8
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 8.4e-36 156.0 370 36.2
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 5.5e-35 153.3 224 42.0
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 2.1e-34 151.4 213 44.6
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 1.8e-33 148.3 306 37.3
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 4.8e-31 140.2 310 34.2
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 2.7e-26 124.4 286 35.0
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 4.6e-26 123.6 229 38.4
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.3e-24 117.5 145 51.0
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 3.3e-24 117.5 259 34.7
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 2.4e-22 111.3 269 32.0
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.1e-22 110.9 260 34.2
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 9.0e-22 109.4 245 35.1
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 2.2e-20 104.8 146 49.3
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.9e-20 104.4 156 37.8
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.1e-18 98.2 310 29.0
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.5e-16 92.0 217 35.5
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.4e-09 68.9 96 50.0
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 5.1e-09 67.0 48 58.3
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 8.8e-09 66.2 302 27.2
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.1e-08 65.9 139 38.8
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.5e-08 65.5 134 36.6
MCO09G489 Micromonas commoda HOM05D006715 ORTHO05D008345 2.0e-08 65.1 107 34.6
COL.COLO4_38230 Corchorus olitorius HOM05D004492 ORTHO05D005602 2.4e-06 58.2 130 29.2
Thecc.08G119000 Theobroma cacao HOM05D004492 ORTHO05D005602 9.1e-06 56.2 154 27.9


User provided reference genes

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