Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 4.5e-101 371.3 195 100.0
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 2.2e-79 299.3 195 75.4
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.0e-73 278.9 190 71.1
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 5.2e-73 278.1 190 69.5
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 3.4e-72 275.4 191 69.6
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 9.8e-72 273.9 192 69.3
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 6.3e-71 271.2 190 70.0
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 6.3e-71 271.2 189 70.9
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.3e-71 270.8 189 70.4
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.1e-70 270.4 189 70.9
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 1.1e-70 270.4 190 68.9
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.8e-70 269.6 190 69.5
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 1.8e-70 269.6 192 72.4
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 2.4e-70 269.2 190 69.5
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 9.2e-70 267.3 192 67.7
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 1.6e-69 266.5 185 70.3
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.6e-69 266.5 190 68.4
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.0e-69 266.2 186 68.8
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 2.7e-69 265.8 193 72.0
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 4.5e-69 265.0 193 67.4
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 4.5e-69 265.0 189 68.8
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 7.8e-69 264.2 190 68.4
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.0e-68 263.8 189 67.2
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.0e-68 263.8 199 65.8
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 1.7e-68 263.1 189 65.6
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 1.7e-68 263.1 201 63.7
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 1.7e-68 263.1 190 67.4
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 2.3e-68 262.7 199 65.8
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 2.3e-68 262.7 187 68.4
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 2.9e-68 262.3 190 67.9
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 6.6e-68 261.2 201 67.2
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 8.6e-68 260.8 190 68.9
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.1e-67 260.4 193 69.9
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.5e-67 260.0 188 65.4
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.5e-67 260.0 189 66.1
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.9e-67 259.6 195 64.6
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 1.9e-67 259.6 189 65.6
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 2.5e-67 259.2 190 65.8
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 2.5e-67 259.2 189 67.2
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 3.3e-67 258.8 190 66.8
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 3.3e-67 258.8 191 62.8
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.3e-67 258.8 195 66.7
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.3e-67 258.8 195 66.7
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 7.3e-67 257.7 188 66.0
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 1.2e-66 256.9 190 65.8
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.2e-66 256.9 190 66.8
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 1.6e-66 256.5 190 67.4
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 8.0e-66 254.2 181 66.9
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 8.0e-66 254.2 192 65.6
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 1.0e-65 253.8 190 63.2
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.0e-65 253.8 192 62.5
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 1.4e-65 253.4 192 66.1
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.8e-65 253.1 193 62.2
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 2.3e-65 252.7 190 65.8
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.0e-65 252.3 202 63.9
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 4.0e-65 251.9 188 62.8
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 5.2e-65 251.5 198 64.6
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 6.8e-65 251.1 190 65.3
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 6.8e-65 251.1 190 65.3
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 8.9e-65 250.8 190 64.2
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 2.0e-64 249.6 189 63.5
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 2.6e-64 249.2 188 66.0
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.6e-64 249.2 216 60.2
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 7.5e-64 247.7 185 64.3
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 9.8e-64 247.3 187 64.7
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.3e-63 246.9 188 62.2
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.3e-63 246.9 192 64.1
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 1.3e-63 246.9 192 64.1
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.3e-63 246.9 182 65.4
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.7e-63 246.5 189 63.5
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.2e-63 246.1 190 62.6
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 2.9e-63 245.7 188 64.9
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 2.9e-63 245.7 180 66.1
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 2.9e-63 245.7 188 64.9
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 6.4e-63 244.6 190 63.2
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.1e-62 243.8 180 66.7
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 1.1e-62 243.8 188 63.8
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 1.1e-62 243.8 184 62.0
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.1e-62 243.8 180 65.0
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 2.4e-62 242.7 181 64.1
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 2.4e-62 242.7 184 63.6
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 9.2e-62 240.7 198 61.6
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 9.2e-62 240.7 195 63.1
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 2.0e-61 239.6 182 61.5
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 5.9e-61 238.0 183 63.9
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.0e-60 237.3 190 61.1
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.0e-60 237.3 199 61.3
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 1.2e-58 230.3 180 62.2
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 2.6e-56 222.6 186 57.0
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 8.3e-55 217.6 264 46.6
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 4.1e-54 215.3 134 73.9
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.3e-52 210.3 161 65.8
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 2.3e-52 209.5 162 66.0
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 6.6e-52 208.0 188 59.6
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 8.6e-52 207.6 182 56.0
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 9.5e-51 204.1 189 50.8
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 2.1e-50 203.0 157 66.2
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 4.7e-50 201.8 157 64.3
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 3.1e-49 199.1 149 64.4
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 5.8e-48 194.9 149 64.4
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 9.2e-46 187.6 138 62.3
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.6e-45 186.8 170 57.1
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 7.8e-45 184.5 149 61.1
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.7e-44 183.3 152 58.6
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 3.9e-44 182.2 190 50.0
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 4.7e-42 175.3 192 50.0
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.4e-41 173.7 194 48.5
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 5.2e-41 171.8 197 48.7
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 7.6e-32 141.4 131 53.4
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 4.9e-31 138.7 188 42.0
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.6e-29 133.7 185 40.5
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 9.6e-27 124.4 72 77.8
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.6e-21 107.1 171 39.8
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 1.3e-18 97.4 56 80.4


User provided reference genes

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