Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 5.0e-280 967.2 526 100.0
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 4.9e-118 429.1 581 51.1
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 8.1e-105 385.2 697 43.5
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 5.9e-87 325.9 673 40.9
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 4.0e-43 180.3 435 35.9
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.6e-36 158.3 474 32.1
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.0e-35 155.6 145 54.5
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 2.3e-35 154.5 204 45.1
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.2e-34 152.1 512 31.4
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.5e-34 151.8 411 30.7
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.4e-34 150.2 596 30.0
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 7.5e-34 149.4 223 42.6
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.3e-33 148.7 132 56.8
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.1e-32 145.6 411 30.7
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.4e-32 144.4 501 30.9
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 9.2e-32 142.5 178 45.5
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 9.2e-32 142.5 189 45.5
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.2e-31 142.1 162 46.9
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.6e-31 141.7 461 30.6
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.0e-31 141.4 514 29.8
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.7e-31 141.0 388 33.5
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.7e-31 141.0 369 32.5
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 3.5e-31 140.6 504 29.8
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.5e-31 140.6 460 30.7
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.5e-31 140.6 253 37.2
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.0e-30 139.0 433 28.4
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.0e-30 139.0 129 51.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.0e-30 139.0 164 47.0
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.3e-30 138.7 499 30.5
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.0e-30 137.5 131 51.1
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 3.0e-30 137.5 369 30.6
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 3.0e-30 137.5 143 48.3
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 3.9e-30 137.1 410 31.0
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 8.6e-30 136.0 410 30.2
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.1e-29 135.6 598 26.8
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.5e-29 135.2 129 51.2
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.5e-29 135.2 135 49.6
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 2.5e-29 134.4 398 31.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 3.3e-29 134.0 121 50.4
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 4.3e-29 133.7 465 30.1
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.3e-29 133.7 144 47.9
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.3e-29 132.9 282 34.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 9.5e-29 132.5 481 31.2
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.1e-28 131.3 136 47.1
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 4.7e-28 130.2 432 29.9
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 6.2e-28 129.8 206 40.3
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 8.0e-28 129.4 232 38.8
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 1.4e-27 128.6 134 48.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.8e-27 128.3 249 36.5
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 4.0e-27 127.1 548 23.5
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 6.8e-27 126.3 468 29.9
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 8.9e-27 125.9 429 27.5
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.2e-26 125.6 229 36.7
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.2e-26 125.6 496 30.0
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.6e-26 124.4 517 26.9
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 3.4e-26 124.0 186 40.9
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.4e-26 124.0 156 43.6
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 9.8e-26 122.5 462 28.8
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.2e-25 121.3 414 27.1
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.9e-25 120.9 449 27.8
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.9e-25 120.9 125 48.0
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 3.7e-25 120.6 468 26.5
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.9e-25 120.2 120 49.2
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 8.3e-25 119.4 538 27.1
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.1e-24 119.0 500 27.2
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 3.2e-24 117.5 481 28.7
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 9.2e-24 115.9 366 29.8
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.2e-23 115.5 483 27.5
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.6e-23 115.2 497 25.2
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 2.0e-23 114.8 554 27.8
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 7.8e-23 112.8 173 37.6
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 5.6e-21 106.7 529 27.2
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.3e-21 106.3 570 25.8
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 9.5e-21 105.9 168 33.9
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.8e-19 101.7 260 28.8
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 4.0e-19 100.5 117 45.3
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.5e-18 98.6 248 30.2
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.0e-18 98.2 505 25.5
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 2.6e-18 97.8 506 25.3
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.4e-18 97.4 596 23.7
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.3e-17 95.5 474 25.9
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.3e-17 95.5 329 28.9
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.9e-17 94.4 507 25.0
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 6.4e-17 93.2 448 24.3
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 5.4e-16 90.1 530 24.2
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 9.2e-16 89.4 514 24.9
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 2.1e-15 88.2 611 23.2
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.5e-15 87.4 146 36.3
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 4.6e-15 87.0 133 36.8
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.1e-13 82.4 81 45.7
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.1e-13 82.4 175 33.1
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.5e-13 82.0 368 27.2
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.9e-13 81.6 137 36.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.9e-13 81.6 137 36.5
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 7.3e-13 79.7 528 22.3
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 7.3e-13 79.7 328 24.7
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 4.7e-12 77.0 304 29.3
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 8.1e-12 76.3 196 28.6
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 1.4e-11 75.5 127 35.4
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.3e-11 74.7 74 47.3
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.1e-11 74.3 74 47.3
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.2e-10 72.4 491 23.2
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.6e-10 71.2 420 26.9
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.3e-09 68.9 302 28.5
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 2.4e-08 64.7 130 31.5
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 5.4e-08 63.5 82 40.2
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 9.2e-08 62.8 63 49.2
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 2.3e-06 58.2 580 22.4


User provided reference genes

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