Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0319181 Helianthus annuus HOM05D013023 ORTHO05D007045 1.5e-95 352.8 176 100.0
HanXRQChr16g0499581 Helianthus annuus HOM05D013023 ORTHO05D225105 1.5e-55 219.9 177 66.1
HanXRQChr04g0127141 Helianthus annuus HOM05D013023 ORTHO05D224213 7.5e-55 217.6 171 67.8
HanXRQChr10g0319211 Helianthus annuus HOM05D013023 ORTHO05D227658 1.3e-54 216.9 138 76.1
HanXRQChr16g0499711 Helianthus annuus HOM05D013023 ORTHO05D226073 4.9e-54 214.9 179 65.4
HanXRQChr04g0127321 Helianthus annuus HOM05D013023 ORTHO05D219833 2.3e-51 206.1 178 65.2
HanXRQChr04g0127301 Helianthus annuus HOM05D013023 ORTHO05D219700 5.6e-50 201.4 183 63.9
HanXRQChr04g0127271 Helianthus annuus HOM05D013023 ORTHO05D000515 2.1e-49 199.5 178 61.8
HanXRQChr04g0127341 Helianthus annuus HOM05D013023 ORTHO05D222451 2.1e-49 199.5 179 64.2
HanXRQChr04g0127361 Helianthus annuus HOM05D013023 ORTHO05D227252 1.7e-46 189.9 171 61.4
HanXRQChr04g0127201 Helianthus annuus HOM05D013023 ORTHO05D222573 9.0e-24 114.4 116 55.2
HanXRQChr13g0404121 Helianthus annuus HOM05D000687 ORTHO05D000515 1.6e-12 77.0 149 35.6
Cpa.g.sc119.80 Carica papaya HOM05D000687 ORTHO05D000515 7.4e-10 68.2 171 29.2
Lsat_1_v5_gn_2_101660 Lactuca sativa HOM05D000687 ORTHO05D000515 4.8e-09 65.5 175 30.3
FAN26G2909 Fragaria x ananassa HOM05D000657 ORTHO05D007045 1.1e-08 64.3 152 30.9
RcHm_v2.0_Chr2g0090991 Rosa chinensis HOM05D000657 ORTHO05D007045 4.0e-08 62.4 152 30.3
HanXRQChr13g0405121 Helianthus annuus HOM05D013023 ORTHO05D221139 5.3e-08 62.0 139 33.1
HanXRQChr14g0453341 Helianthus annuus HOM05D000687 ORTHO05D000515 5.3e-08 62.0 153 29.4
FAN26G2949 Fragaria x ananassa HOM05D000657 ORTHO05D007045 6.9e-08 61.6 152 32.2
FvH4_1g05270 Fragaria vesca HOM05D000657 ORTHO05D007045 9.0e-08 61.2 152 30.9
FAN23G1397 Fragaria x ananassa HOM05D000657 ORTHO05D007045 9.0e-08 61.2 152 30.9
FAN28G2329 Fragaria x ananassa HOM05D000657 ORTHO05D007045 1.5e-07 60.5 152 29.6
CsaV3_1G030790 Cucumis sativus L. HOM05D000657 ORTHO05D007045 2.0e-07 60.1 153 32.7
PGR119G0386 Punica granatum HOM05D000687 ORTHO05D000515 2.6e-07 59.7 102 34.3
MELO3C025322.2 Cucumis melo HOM05D000657 ORTHO05D007045 3.4e-07 59.3 153 32.0
ATR0001G017 Amborella trichopoda HOM05D000687 ORTHO05D000515 4.5e-07 58.9 155 29.0
TWI34G0696 Tripterygium wilfordii HOM05D000687 ORTHO05D000515 4.5e-07 58.9 162 33.3
HPP92_015938 Vanilla planifolia HOM05D000687 ORTHO05D000515 4.5e-07 58.9 102 34.3
FAN19G0196 Fragaria x ananassa HOM05D000657 ORTHO05D007045 5.8e-07 58.5 152 30.3
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 1.3e-06 57.4 94 30.9
BcaB02g10833 Brassica carinata HOM05D000687 ORTHO05D000515 1.3e-06 57.4 112 33.0
Manes.03G088200 Manihot esculenta HOM05D000687 ORTHO05D000515 1.3e-06 57.4 148 28.4
HPP92_015917 Vanilla planifolia HOM05D000687 ORTHO05D000515 1.3e-06 57.4 109 33.0
HanXRQChr13g0405131 Helianthus annuus HOM05D013023 ORTHO05D226889 1.7e-06 57.0 110 40.0
Manes.03G068700 Manihot esculenta HOM05D000657 ORTHO05D007045 1.7e-06 57.0 153 32.0
Ciclev10016930m.g Citrus clementina HOM05D000687 ORTHO05D000515 2.2e-06 56.6 153 28.8
Lj1P549T8 Lonicera japonica HOM05D000687 ORTHO05D000515 2.2e-06 56.6 126 27.8
Lj1P552T9 Lonicera japonica HOM05D000687 ORTHO05D000515 2.2e-06 56.6 126 27.8
ClCG02G023930 Citrullus lanatus HOM05D000687 ORTHO05D000515 2.9e-06 56.2 150 26.0
MBI01_g48123_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 3.8e-06 55.8 148 27.0
SalBow6G5952 Salvia bowleyana HOM05D000687 ORTHO05D000515 3.8e-06 55.8 178 28.7
HPP92_020683 Vanilla planifolia HOM05D000687 ORTHO05D000515 3.8e-06 55.8 149 29.5
Ah.14g081610 Amaranthus hybridus HOM05D000657 ORTHO05D007045 4.9e-06 55.5 153 30.7
A05p17590 Brassica napus HOM05D000687 ORTHO05D000515 4.9e-06 55.5 114 33.3
BraA05t20652Z Brassica rapa HOM05D000687 ORTHO05D000515 4.9e-06 55.5 114 33.3
ClCG06G010340 Citrullus lanatus HOM05D000657 ORTHO05D007045 4.9e-06 55.5 149 30.2
ClCG06G010360 Citrullus lanatus HOM05D000657 ORTHO05D007045 4.9e-06 55.5 149 30.2
MBI01_g46867_MAGBIO Magnolia biondii HOM05D000687 ORTHO05D000515 4.9e-06 55.5 145 27.6
Cc01_g02430 Coffea canephora HOM05D000687 ORTHO05D000515 6.4e-06 55.1 167 25.1
Dinv36608 Davidia involucrata HOM05D000657 ORTHO05D007045 6.4e-06 55.1 120 30.8
Duzib150G0869 Durio zibethinus HOM05D000687 ORTHO05D000515 6.4e-06 55.1 136 25.7
ECA238G1047 Erigeron canadensis HOM05D000687 ORTHO05D000515 6.4e-06 55.1 174 24.1
Sed0013293 Sechium edule HOM05D000657 ORTHO05D007045 6.4e-06 55.1 154 30.5
unitig_26.g8976 Utricularia gibba HOM05D000325 ORTHO05D007045 6.4e-06 55.1 120 32.5
Actinidia06289 Actinidia chinensis HOM05D000687 ORTHO05D000515 8.4e-06 54.7 116 34.5
MSTRG.19594 Avicennia marina HOM05D000657 ORTHO05D007045 8.4e-06 54.7 155 30.3
BcaC08g44184 Brassica carinata HOM05D000687 ORTHO05D000515 8.4e-06 54.7 112 31.2
BolC6t36781H Brassica oleracea HOM05D000687 ORTHO05D000515 8.4e-06 54.7 112 31.2
HanXRQChr11g0344901 Helianthus annuus HOM05D000687 ORTHO05D000515 8.4e-06 54.7 114 36.0
Potri.006G158952 Populus trichocarpa HOM05D000657 ORTHO05D007045 8.4e-06 54.7 147 27.9


User provided reference genes

Program Settings