Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 0.0e+00 1484.2 765 100.0
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 0.0e+00 1172.5 778 78.8
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.0e-310 1069.7 771 75.6
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 2.0e-306 1055.4 780 72.8
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 9.1e-214 747.7 838 52.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 3.3e-208 729.2 839 50.8
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 4.8e-207 725.3 811 52.0
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.3e-204 717.2 839 50.7
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 9.4e-203 711.1 863 49.4
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 1.2e-202 710.7 841 49.6
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.7e-202 708.8 837 50.1
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 8.8e-201 704.5 842 50.0
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 4.4e-200 702.2 833 49.3
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.7e-200 701.8 847 48.3
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.2e-199 699.9 864 48.8
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 4.8e-199 698.7 840 50.0
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 4.8e-199 698.7 840 49.6
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 6.3e-199 698.4 840 49.9
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 6.3e-199 698.4 841 48.5
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 8.2e-199 698.0 844 49.2
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 4.1e-198 695.7 841 49.0
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 7.0e-198 694.9 843 48.9
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.3e-196 690.6 844 49.4
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.3e-196 690.6 845 48.2
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.2e-196 689.9 844 49.1
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 4.2e-195 685.6 844 48.1
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 7.2e-195 684.9 842 48.3
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 9.4e-195 684.5 835 48.9
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.7e-194 682.9 847 48.5
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.0e-193 681.0 847 49.5
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.8e-193 680.2 844 47.5
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.0e-193 679.5 839 48.5
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 4.0e-193 679.1 836 48.9
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.0e-192 676.8 838 46.9
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.6e-192 676.4 821 48.6
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 3.4e-192 676.0 833 47.4
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.7e-192 675.2 847 48.2
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 2.2e-191 673.3 836 48.1
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 8.3e-191 671.4 906 47.0
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.8e-190 670.2 848 48.5
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 2.4e-190 669.8 835 47.5
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 4.1e-190 669.1 837 47.7
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 7.0e-190 668.3 839 47.9
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 3.5e-189 666.0 842 48.1
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 6.5e-188 661.8 835 48.9
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 8.5e-188 661.4 824 47.9
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 1.5e-187 660.6 819 50.2
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.9e-187 660.2 885 46.4
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.9e-187 660.2 847 47.2
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.7e-186 656.4 835 46.2
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 8.0e-186 654.8 850 47.4
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.4e-185 654.1 831 47.4
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.8e-185 653.7 846 46.9
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 5.7e-184 648.7 837 47.0
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 5.7e-184 648.7 841 47.1
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 2.2e-183 646.7 837 46.5
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 2.2e-183 646.7 842 47.3
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 2.8e-183 646.4 821 47.7
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.3e-183 645.2 843 45.6
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 8.3e-183 644.8 841 45.7
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 8.3e-183 644.8 843 47.7
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 1.4e-182 644.0 848 47.8
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.4e-182 644.0 822 47.3
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.8e-182 643.7 783 49.3
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 7.0e-182 641.7 816 48.4
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.7e-181 639.8 843 46.0
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 2.3e-180 636.7 715 52.0
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.9e-180 636.3 788 49.0
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 5.0e-180 635.6 974 42.3
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-179 634.4 850 46.5
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.9e-179 633.6 832 46.0
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 3.6e-178 629.4 844 45.1
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 4.7e-178 629.0 827 45.2
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 6.1e-178 628.6 843 45.3
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.4e-177 627.5 801 46.8
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.3e-177 626.7 826 45.2
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 2.3e-177 626.7 846 46.0
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 5.2e-177 625.5 836 45.7
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 6.8e-177 625.2 826 45.0
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 6.8e-177 625.2 842 45.0
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.5e-176 624.0 825 45.1
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 2.0e-176 623.6 811 47.5
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 2.6e-176 623.2 844 45.0
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 2.6e-176 623.2 848 46.3
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 9.8e-176 621.3 957 41.6
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.7e-175 620.5 826 44.8
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.7e-175 620.5 978 41.9
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 2.4e-174 616.7 826 46.6
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 2.4e-174 616.7 823 45.3
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 7.0e-174 615.1 838 46.1
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 7.0e-174 615.1 837 46.6
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 5.9e-173 612.1 877 44.2
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 1.3e-172 610.9 881 44.9
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 2.5e-171 606.7 827 45.6
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 4.3e-171 605.9 826 44.7
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.8e-169 600.5 826 45.3
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 3.4e-168 596.3 692 51.0
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 7.5e-168 595.1 830 44.8
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 2.9e-167 593.2 816 44.7
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 2.4e-166 590.1 818 45.5
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 2.0e-165 587.0 793 45.1
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.7e-165 586.6 811 45.9
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 4.7e-162 575.9 827 43.4
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 4.0e-161 572.8 794 44.1
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 6.8e-161 572.0 778 43.8
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.5e-160 570.9 790 44.8
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 4.4e-160 569.3 800 42.5
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 8.3e-159 565.1 850 42.5
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.4e-158 563.5 659 49.8
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 2.4e-158 563.5 794 42.8
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 3.2e-158 563.1 785 42.4
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.6e-157 560.8 797 42.4
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 7.8e-157 558.5 782 42.1
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 1.3e-156 557.8 781 42.1
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 9.5e-155 551.6 812 43.3
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 2.1e-154 550.4 794 43.1
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 4.0e-153 546.2 660 49.2
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 5.4e-150 535.8 781 41.7
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 6.6e-148 528.9 906 38.5
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 4.3e-147 526.2 640 49.2
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.1e-145 521.5 858 40.8
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.2e-145 519.2 638 48.4
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 2.6e-144 516.9 641 49.6
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 3.0e-140 503.4 623 50.1
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 7.3e-139 498.8 684 47.1
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.2e-136 491.5 817 40.1
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.8e-136 489.2 844 38.6
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 6.0e-133 479.2 839 38.6
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 3.9e-132 476.5 716 43.3
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.1e-132 476.1 646 44.6
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 5.6e-131 472.6 822 38.6
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 6.2e-130 469.2 608 47.5
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.9e-127 460.3 873 36.7
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.1e-126 458.4 823 38.2
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.1e-122 444.1 650 43.5
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 5.5e-118 429.5 782 37.1
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 3.0e-116 423.7 902 34.8
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 3.3e-115 420.2 751 41.0
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.5e-111 406.0 540 44.8
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 3.9e-108 396.7 556 42.4
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 6.7e-108 396.0 544 43.0
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.1e-101 374.4 813 32.6
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 2.7e-101 374.0 782 35.0
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.4e-92 345.1 822 32.1
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 1.4e-89 335.1 468 43.6
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.6e-88 331.6 657 38.4
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 2.7e-85 320.9 735 31.3
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.6e-75 287.7 413 45.0
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 2.0e-72 278.1 756 33.5
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.8e-57 228.4 431 38.7
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 1.0e-55 222.6 339 42.2
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-49 202.2 667 27.4
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.6e-37 162.2 196 47.4
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 2.8e-37 161.4 299 35.5
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.2e-35 156.0 235 42.6
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 5.8e-35 153.7 260 37.3
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.7e-34 152.1 113 61.1
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 8.4e-34 149.8 212 39.6
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 2.1e-32 145.2 183 41.0
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 4.3e-30 137.5 181 39.8
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.7e-29 134.0 249 36.9
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 2.1e-21 108.6 138 44.9
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 4.0e-20 104.4 225 34.2
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 9.0e-20 103.2 194 32.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.5e-19 102.4 122 45.1
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 7.6e-19 100.1 114 50.0
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.4e-17 95.1 113 46.0
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.5e-14 85.9 92 51.1
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.9e-14 85.5 115 44.3
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 9.6e-14 83.2 68 57.4
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.6e-13 82.4 66 54.5
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 3.1e-12 78.2 72 50.0
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.9e-12 77.0 165 37.6
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.0e-11 75.5 83 45.8
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.6e-11 75.1 72 48.6
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 5.8e-11 73.9 66 56.1
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.3e-10 72.8 53 62.3
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 8.4e-10 70.1 173 32.9
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.8e-07 62.4 141 35.5
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 6.7e-07 60.5 40 67.5
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 2.5e-06 58.5 77 41.6
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 9.6e-06 56.6 62 43.5


User provided reference genes

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