Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0314401 Helianthus annuus HOM05D007340 ORTHO05D008979 1.0e-121 441.4 567 100.0
HanXRQChr17g0539051 Helianthus annuus HOM05D007340 ORTHO05D008979 2.5e-91 340.5 568 89.6
Lsat_1_v5_gn_5_93381 Lactuca sativa HOM05D007340 ORTHO05D008979 3.5e-69 266.9 199 65.8
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 2.8e-42 177.6 208 44.7
Dinv44465 Davidia involucrata HOM05D007340 ORTHO05D008979 6.2e-42 176.4 210 42.4
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 6.8e-41 172.9 208 44.2
Lj4P768T34 Lonicera japonica HOM05D007340 ORTHO05D008979 1.5e-40 171.8 195 42.1
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 9.9e-40 169.1 219 39.7
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 3.2e-38 164.1 206 42.2
Atru.chr4.2678 Acer truncatum HOM05D007340 ORTHO05D008979 9.2e-38 162.5 203 40.4
Atru.chr4.2685 Acer truncatum HOM05D007340 ORTHO05D008979 9.2e-38 162.5 203 40.4
Cfa015550 Carpinus fangiana HOM05D007340 ORTHO05D008979 9.2e-38 162.5 214 40.7
Haze_00999 Corylus avellana HOM05D007340 ORTHO05D008979 1.6e-37 161.8 214 40.7
GSVIVG01017865001 Vitis vinifera HOM05D007340 ORTHO05D008979 2.1e-37 161.4 181 44.8
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 4.6e-37 160.2 121 60.3
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 1.0e-36 159.1 217 39.6
Hma1.2p1_0511F.1_g169170 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 1.0e-36 159.1 209 36.4
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 1.0e-36 159.1 209 36.4
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 5.1e-36 156.8 188 45.2
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 6.6e-36 156.4 214 37.9
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 2.5e-35 154.5 160 43.1
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 5.6e-35 153.3 193 38.9
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 4.7e-34 150.2 158 46.8
Manes.03G186900 Manihot esculenta HOM05D007340 ORTHO05D008979 4.7e-34 150.2 214 36.4
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 6.2e-34 149.8 211 37.4
arahy.Tifrunner.gnm1.ann1.PE1C4R Arachis hypogaea HOM05D007340 ORTHO05D008979 8.1e-34 149.4 164 46.3
Gohir.D09G059500 Gossypium hirsutum HOM05D001150 ORTHO05D008979 1.1e-33 149.1 176 40.3
Gorai.006G074200 Gossypium raimondii HOM05D001150 ORTHO05D008979 1.4e-33 148.7 212 36.8
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 1.4e-33 148.7 209 38.3
TWI73G0639 Tripterygium wilfordii HOM05D007340 ORTHO05D008979 1.4e-33 148.7 208 35.1
Gohir.A09G060400 Gossypium hirsutum HOM05D001150 ORTHO05D008979 3.1e-33 147.5 176 39.8
Sc19g0004680 Simmondsia chinensis HOM05D007340 ORTHO05D008979 5.2e-33 146.7 215 37.2
Migut.G00250 Erythranthe guttata HOM05D007340 ORTHO05D008979 1.2e-32 145.6 154 48.1
PGSC0003DMG400004352 Solanum tuberosum HOM05D007340 ORTHO05D008979 1.2e-32 145.6 157 43.9
Solyc01g080310.4 Solanum lycopersicum HOM05D007340 ORTHO05D008979 2.0e-32 144.8 154 44.8
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 2.0e-32 144.8 206 37.4
Oeu021055.1 Olea europaea HOM05D007340 ORTHO05D008979 3.4e-32 144.1 208 38.9
CAN.G522.11 Capsicum annuum HOM05D007340 ORTHO05D008979 4.4e-32 143.7 157 43.3
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 4.4e-32 143.7 192 37.5
Cpa.g.sc16.57 Carica papaya HOM05D007340 ORTHO05D008979 5.8e-32 143.3 169 40.2
Sopen01g032100 Solanum pennellii HOM05D007340 ORTHO05D008979 5.8e-32 143.3 157 43.9
FvH4_4g14110 Fragaria vesca HOM05D007340 ORTHO05D008979 7.6e-32 142.9 194 37.6
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 7.6e-32 142.9 174 40.2
Medtr5g094770 Medicago truncatula HOM05D007340 ORTHO05D008979 9.9e-32 142.5 161 44.1
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 1.7e-31 141.7 217 34.1
FAN12G4271 Fragaria x ananassa HOM05D007340 ORTHO05D008979 4.9e-31 140.2 194 37.1
RcHm_v2.0_Chr4g0419121 Rosa chinensis HOM05D007340 ORTHO05D008979 4.9e-31 140.2 193 36.8
TPR.G28181 Trifolium pratense HOM05D007340 ORTHO05D008979 8.4e-31 139.4 186 40.3
ClCG05G001120 Citrullus lanatus HOM05D007340 ORTHO05D008979 1.1e-30 139.0 169 37.9
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 2.4e-30 137.9 174 42.0
CANSAT78G0497 Cannabis sativa HOM05D007340 ORTHO05D008979 9.3e-30 136.0 173 37.0
Sed0013632 Sechium edule HOM05D007340 ORTHO05D008979 9.3e-30 136.0 157 42.7
TPR.G14140 Trifolium pratense HOM05D007340 ORTHO05D008979 1.2e-29 135.6 177 41.2
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 6.0e-29 133.3 157 41.4
MELO3C006065.2 Cucumis melo HOM05D007340 ORTHO05D008979 7.8e-29 132.9 154 39.0
PGR065G0011 Punica granatum HOM05D007340 ORTHO05D008979 3.9e-28 130.6 153 40.5
CsaV3_3G008450 Cucumis sativus L. HOM05D007340 ORTHO05D008979 1.5e-27 128.6 154 38.3
Eucgr.C04132 Eucalyptus grandis HOM05D007340 ORTHO05D008979 1.5e-27 128.6 153 41.2
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 1.3e-26 125.6 151 42.4
Eucgr.C03952 Eucalyptus grandis HOM05D007340 ORTHO05D008979 2.1e-26 124.8 153 39.2
CSS0023925 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 2.8e-26 124.4 206 36.4
Carub.0006s1725 Capsella rubella HOM05D007340 ORTHO05D008979 2.8e-26 124.4 206 35.4
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 1.4e-25 122.1 152 38.2
AUR62021475 Chenopodium quinoa HOM05D007340 ORTHO05D008979 1.4e-25 122.1 153 41.8
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 2.4e-25 121.3 163 37.4
AL6G30300 Arabidopsis lyrata HOM05D007340 ORTHO05D008979 3.1e-25 120.9 203 35.5
Aqoxy1G00377 Aquilegia oxysepala HOM05D007340 ORTHO05D008979 6.9e-25 119.8 150 38.7
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 6.9e-25 119.8 174 38.5
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 9.0e-25 119.4 181 38.1
FAN17G2541 Fragaria x ananassa HOM05D007340 ORTHO05D008979 1.2e-24 119.0 194 33.0
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 2.0e-24 118.2 187 38.5
A10p20720 Brassica napus HOM05D007340 ORTHO05D008979 2.2e-23 114.8 213 32.4
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 2.2e-23 114.8 152 38.2
AT5G18950 Arabidopsis thaliana HOM05D007340 ORTHO05D008979 6.4e-23 113.2 203 33.5
BraA10t44135Z Brassica rapa HOM05D007340 ORTHO05D008979 6.4e-23 113.2 210 32.9
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 6.4e-23 113.2 166 36.7
BcaB08g36633 Brassica carinata HOM05D007340 ORTHO05D008979 8.4e-23 112.8 213 32.9
BcaC04g18636 Brassica carinata HOM05D007340 ORTHO05D008979 1.4e-22 112.1 209 33.0
BolC9t58627H Brassica oleracea HOM05D007340 ORTHO05D008979 1.4e-22 112.1 211 31.8
CARHR194060 Cardamine hirsuta HOM05D007340 ORTHO05D008979 1.4e-22 112.1 192 33.9
THA.LOC104827130 Tarenaya hassleriana HOM05D007340 ORTHO05D008979 4.2e-22 110.5 163 33.1
C09p57580 Brassica napus HOM05D007340 ORTHO05D008979 1.2e-21 109.0 211 31.3
SHI00355 Sapria himalayana HOM05D007340 ORTHO05D008979 2.1e-21 108.2 217 28.6
PSO170G6018 Papaver somniferum HOM05D007340 ORTHO05D008979 4.6e-21 107.1 151 33.8
Sp6g25440 Schrenkiella parvula HOM05D007340 ORTHO05D008979 3.0e-20 104.4 212 30.2
TPR.G15743 Trifolium pratense HOM05D007340 ORTHO05D008979 3.0e-20 104.4 113 44.2
Lsat_1_v5_gn_8_10680 Lactuca sativa HOM05D007340 ORTHO05D008979 2.8e-18 97.8 68 61.8
DCAR_030586 Daucus carota HOM05D007340 ORTHO05D008979 1.2e-16 92.4 90 47.8
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 3.4e-16 90.9 153 35.3
CSS0037889 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.0e-12 79.3 78 47.4
CDE04G1227 Ceratophyllum demersum HOM05D007340 ORTHO05D008979 1.3e-12 79.0 155 26.5
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 1.8e-12 78.6 107 35.5
CSS0014652 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 2.1e-10 71.6 93 38.7
BcaB01g05283 Brassica carinata HOM05D007340 ORTHO05D008979 3.7e-10 70.9 98 36.7
C03p10720 Brassica napus HOM05D007340 ORTHO05D008979 1.2e-08 65.9 94 36.2
Gohir.D08G046350 Gossypium hirsutum HOM05D007340 ORTHO05D008979 1.5e-08 65.5 67 43.3
Gorai.004G045600 Gossypium raimondii HOM05D007340 ORTHO05D008979 1.5e-08 65.5 67 43.3
Lsat_1_v5_gn_4_28380 Lactuca sativa HOM05D007340 ORTHO05D008979 1.7e-07 62.0 41 63.4
CSS0002707 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 6.5e-07 60.1 48 54.2


User provided reference genes

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