Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 3.6e-135 485.0 248 100.0
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 4.3e-64 248.8 180 73.3
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 2.4e-62 243.0 177 71.2
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 1.3e-60 237.3 188 67.6
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 3.4e-45 186.0 124 72.6
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 5.5e-35 152.1 179 52.0
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 2.8e-31 139.8 156 53.8
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 1.8e-30 137.1 155 52.9
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 2.4e-30 136.7 177 55.4
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 3.1e-30 136.3 179 50.8
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 3.1e-30 136.3 154 53.2
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 4.0e-30 136.0 198 49.0
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 4.0e-30 136.0 167 51.5
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 1.2e-29 134.4 170 51.2
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 2.0e-29 133.7 188 48.4
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 7.6e-29 131.7 201 48.3
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 1.3e-28 131.0 166 50.0
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.9e-28 129.8 151 56.3
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 4.9e-28 129.0 181 51.4
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 3.2e-27 126.3 186 47.3
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 3.2e-27 126.3 170 52.9
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 5.5e-27 125.6 170 49.4
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 9.3e-27 124.8 187 44.9
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 2.1e-26 123.6 148 54.1
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 2.7e-26 123.2 170 46.5
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 1.8e-25 120.6 155 50.3
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 2.3e-25 120.2 168 49.4
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 2.3e-25 120.2 176 49.4
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 1.1e-24 117.9 149 49.7
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 3.3e-24 116.3 177 46.9
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 4.3e-24 115.9 164 48.2
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 5.7e-24 115.5 196 41.8
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 7.4e-24 115.2 163 49.7
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 9.7e-24 114.8 162 49.4
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 9.7e-24 114.8 195 44.1
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.2e-23 113.6 193 43.5
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.1e-22 111.3 163 46.6
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 1.4e-22 110.9 166 48.2
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 2.4e-22 110.2 135 51.1
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 3.1e-22 109.8 146 50.0
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 6.9e-22 108.6 179 45.8
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 9.0e-22 108.2 154 48.1
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 1.5e-21 107.5 173 41.6
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.5e-21 107.5 130 51.5
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 2.6e-21 106.7 177 43.5
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 3.4e-21 106.3 177 45.2
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.4e-21 106.3 187 43.3
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 4.5e-21 105.9 189 41.8
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 4.5e-21 105.9 151 46.4
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 5.9e-21 105.5 168 45.8
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 1.0e-20 104.8 191 44.0
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.0e-20 104.8 189 41.8
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 2.9e-20 103.2 164 45.1
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 2.9e-20 103.2 164 45.1
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 3.8e-20 102.8 178 45.5
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 3.8e-20 102.8 181 45.9
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.5e-20 102.1 134 49.3
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.1e-19 101.3 177 40.1
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 1.4e-19 100.9 148 47.3
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 3.2e-19 99.8 154 47.4
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 3.2e-19 99.8 154 45.5
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 4.2e-19 99.4 126 51.6
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 4.2e-19 99.4 182 40.7
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 5.5e-19 99.0 171 45.0
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 7.2e-19 98.6 173 42.2
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 9.4e-19 98.2 169 43.8
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 9.4e-19 98.2 194 37.1
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 1.2e-18 97.8 65 73.8
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.6e-18 97.4 130 50.8
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 1.6e-18 97.4 137 46.0
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 2.1e-18 97.1 180 44.4
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.6e-18 96.3 181 42.0
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 4.6e-18 95.9 151 43.0
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.0e-17 94.7 144 45.8
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-17 94.0 133 46.6
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.9e-17 92.8 169 43.2
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 5.1e-17 92.4 178 41.0
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 5.1e-17 92.4 177 41.8
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 6.7e-17 92.0 183 41.5
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 1.1e-16 91.3 152 44.7
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 1.5e-16 90.9 134 46.3
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 2.0e-16 90.5 150 42.0
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 2.0e-16 90.5 165 40.6
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.3e-16 89.7 89 52.8
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-15 87.0 132 44.7
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 3.7e-15 86.3 175 42.9
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 3.7e-15 86.3 175 42.9
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 3.7e-15 86.3 147 44.2
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 4.8e-15 85.9 172 41.9
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 4.8e-15 85.9 92 54.3
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 8.2e-15 85.1 67 67.2
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 2.4e-14 83.6 163 39.3
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 3.1e-14 83.2 92 52.2
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 3.1e-14 83.2 135 44.4
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 4.1e-14 82.8 174 40.2
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 6.9e-14 82.0 90 53.3
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 6.9e-14 82.0 176 38.6
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 1.5e-13 80.9 163 41.7
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 1.5e-13 80.9 98 56.1
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 2.6e-13 80.1 176 38.6
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.4e-13 79.7 98 49.0
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 4.5e-13 79.3 168 39.3
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 1.7e-12 77.4 172 39.0
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 2.9e-12 76.6 149 39.6
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 6.5e-12 75.5 167 41.3
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 1.9e-11 73.9 138 42.8
Lsat_1_v5_gn_4_162060 Lactuca sativa HOM05D006672 ORTHO05D007769 4.2e-11 72.8 62 62.9
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 5.5e-11 72.4 138 40.6
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 1.2e-10 71.2 97 49.5
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 2.7e-10 70.1 170 36.5
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 3.6e-10 69.7 140 39.3
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 6.1e-10 68.9 145 40.0
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 7.9e-10 68.6 120 40.0
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 5.1e-09 65.9 88 52.3
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 6.7e-09 65.5 173 36.4
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 1.5e-08 64.3 92 45.7
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 2.6e-08 63.5 145 34.5
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 7.4e-08 62.0 162 35.8
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-07 60.5 134 38.8
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.2e-07 60.5 67 53.7
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 4.8e-07 59.3 99 39.4


User provided reference genes

Program Settings