Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2677.1 1335 100.0
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2327.0 1255 92.2
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2254.2 1290 88.0
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2196.0 1269 85.7
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2191.4 1282 84.2
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2183.7 1268 84.1
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2182.5 1282 84.1
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2174.4 1268 84.5
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2166.0 1268 84.5
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2162.1 1268 84.2
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2160.2 1272 84.3
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1270 84.2
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2155.6 1270 84.3
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2154.8 1270 83.5
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2154.4 1272 84.0
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2154.0 1268 83.4
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2151.3 1270 84.1
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2148.2 1272 83.2
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2145.9 1268 83.0
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2145.5 1267 82.6
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2145.2 1270 82.6
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2144.8 1268 82.2
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2144.4 1265 83.9
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2142.1 1268 83.2
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2142.1 1264 83.2
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1265 83.6
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2139.8 1265 83.6
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2139.4 1268 82.6
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2138.6 1270 81.8
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2136.7 1270 81.9
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2135.5 1268 82.6
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2135.5 1268 82.3
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2135.5 1268 82.2
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2135.1 1273 82.0
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1268 83.2
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2134.0 1266 82.9
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2133.6 1268 82.6
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2132.1 1270 82.1
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2132.1 1265 83.1
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2131.7 1268 81.9
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2131.3 1260 83.7
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2131.3 1269 82.6
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2130.9 1269 82.6
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2130.1 1268 81.8
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2130.1 1267 82.6
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2130.1 1267 82.4
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2129.4 1268 82.4
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2129.4 1268 81.9
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2129.4 1268 81.9
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2129.0 1268 82.5
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2127.4 1291 81.3
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2126.3 1268 82.0
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2126.3 1268 82.6
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2125.5 1268 82.5
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2125.5 1269 82.3
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2125.1 1269 82.0
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2125.1 1268 82.1
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2125.1 1268 82.1
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2125.1 1270 82.8
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2124.4 1268 82.0
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2123.6 1269 83.1
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2123.2 1270 81.9
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2121.7 1267 82.2
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2120.1 1267 82.1
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2120.1 1270 81.3
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2114.7 1270 82.0
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2107.0 1266 80.6
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2106.3 1266 81.0
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2103.9 1265 82.5
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2103.2 1285 80.9
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2102.0 1268 81.1
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2101.2 1266 81.0
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2098.9 1268 81.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2098.6 1269 82.1
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2097.8 1240 83.7
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2091.2 1267 80.4
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2084.3 1267 80.3
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2081.6 1209 85.4
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2079.7 1267 80.5
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2078.1 1266 79.9
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2077.4 1266 79.8
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2075.4 1269 81.1
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2073.1 1269 80.8
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2068.1 1251 81.5
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2048.9 1271 79.5
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2041.2 1266 78.3
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2030.8 1266 78.8
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2030.4 1269 77.3
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2027.7 1264 79.0
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2023.1 1265 80.1
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2014.2 1267 78.9
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1996.9 1270 77.7
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1969.1 1264 78.3
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1939.9 1161 82.4
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1915.6 1264 74.7
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1905.2 1271 73.2
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1890.9 1269 74.1
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1849.3 1189 77.2
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1828.1 1276 70.9
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1826.2 1069 82.8
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1819.3 1263 72.1
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1812.7 1241 72.7
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1773.1 1128 78.5
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1768.4 1088 80.1
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1736.1 1268 69.3
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1733.0 1271 70.5
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1605.1 961 80.2
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1540.0 1317 61.7
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1533.5 1043 72.9
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1350.9 813 81.2
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1350.9 1261 59.4
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1342.8 1336 54.1
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1322.0 1394 53.1
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1226.5 725 82.9
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1134.4 1009 60.8
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1118.2 806 72.3
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.1e-262 909.4 572 79.4
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.2e-259 899.0 1241 41.2
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.1e-250 868.6 503 85.5
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-217 759.6 651 60.5
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.0e-216 757.3 526 72.1
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.7e-196 689.1 449 78.0
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.3e-179 633.3 390 82.3
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 1.5e-131 475.3 359 67.7
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 6.8e-116 423.3 312 70.5
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.5e-102 379.0 270 71.5
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 3.2e-81 308.1 481 42.0
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.5e-70 271.9 171 78.4
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 8.2e-69 266.9 171 77.8
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 6.9e-68 263.8 171 76.6
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.3e-63 248.8 138 90.6
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 3.3e-62 245.0 234 59.0
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.1e-49 203.4 116 81.0
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 9.4e-41 173.7 153 63.4
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.0e-39 170.2 182 56.0
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.8e-39 169.5 90 87.8
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.2e-30 140.2 99 64.6
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.5e-25 122.5 104 60.6


User provided reference genes

Program Settings