Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.1e-237 826.2 429 100.0
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 4.8e-156 555.1 350 82.0
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 1.4e-155 553.5 456 67.3
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 4.1e-131 472.2 397 65.5
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 3.9e-129 465.7 405 63.5
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 2.9e-124 449.5 404 61.4
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 2.9e-124 449.5 380 63.7
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 7.0e-123 444.9 381 62.7
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 7.0e-123 444.9 384 62.8
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 9.2e-123 444.5 384 62.8
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 6.0e-122 441.8 385 62.6
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 8.6e-121 438.0 391 63.2
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 3.3e-120 436.0 352 66.5
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 5.6e-120 435.3 380 61.1
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 5.6e-120 435.3 385 62.6
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 9.5e-120 434.5 391 62.9
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 2.1e-119 433.3 379 63.9
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 3.6e-119 432.6 376 63.3
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.4e-118 430.6 393 61.3
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 4.0e-118 429.1 398 59.0
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 3.4e-117 426.0 396 59.6
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 5.8e-117 425.2 386 59.3
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 9.9e-117 424.5 386 59.3
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 2.2e-116 423.3 380 59.2
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 2.9e-116 422.9 419 58.2
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 2.9e-116 422.9 387 59.9
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 1.4e-115 420.6 380 58.9
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 3.2e-115 419.5 384 60.7
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 5.4e-115 418.7 388 59.3
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 1.6e-114 417.2 383 60.6
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 2.7e-114 416.4 380 60.5
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 3.5e-114 416.0 374 60.2
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 3.5e-114 416.0 406 57.9
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 7.8e-114 414.8 379 59.6
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 2.3e-113 413.3 365 60.0
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 3.0e-113 412.9 388 57.7
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 3.0e-113 412.9 377 60.2
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 1.5e-112 410.6 394 59.6
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 1.6e-111 407.1 381 58.8
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 2.1e-111 406.8 374 59.4
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 4.0e-110 402.5 382 59.2
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 4.0e-110 402.5 355 59.4
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 5.2e-110 402.1 379 58.3
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 6.8e-110 401.7 378 58.7
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 1.5e-109 400.6 396 56.1
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 9.9e-109 397.9 382 59.2
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 9.9e-109 397.9 383 59.3
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 3.8e-108 396.0 384 56.5
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 8.4e-108 394.8 382 57.9
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 1.9e-107 393.7 400 55.5
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.6e-106 390.6 382 57.1
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 2.7e-106 389.8 377 56.5
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 7.8e-106 388.3 387 56.8
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 2.3e-105 386.7 348 59.5
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 1.5e-104 384.0 396 55.3
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 2.5e-104 383.3 340 60.9
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 4.3e-104 382.5 411 54.5
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 5.6e-104 382.1 393 55.5
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 1.6e-103 380.6 332 60.8
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 3.6e-103 379.4 373 56.6
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 1.4e-102 377.5 356 57.9
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 1.4e-102 377.5 377 55.4
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 2.9e-100 369.8 331 60.7
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 6.0e-98 362.1 368 56.2
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 6.0e-98 362.1 381 52.5
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 1.3e-97 360.9 404 52.7
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 1.7e-97 360.5 333 58.9
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 1.3e-95 354.4 275 67.3
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 6.9e-94 348.6 402 49.8
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 3.8e-92 342.8 392 51.3
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 1.0e-89 334.7 310 58.7
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 2.1e-87 327.0 388 48.5
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 4.5e-85 319.3 396 48.7
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 4.2e-83 312.8 380 50.5
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 5.5e-83 312.4 246 66.3
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 2.7e-82 310.1 302 55.0
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 1.6e-79 300.8 453 43.3
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 5.3e-78 295.8 387 47.5
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 5.3e-78 295.8 388 46.9
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 3.4e-77 293.1 384 46.1
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 4.6e-74 282.7 219 66.7
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 8.7e-73 278.5 298 54.7
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 4.8e-71 272.7 200 67.5
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 1.2e-69 268.1 276 55.1
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 1.4e-67 261.2 326 46.3
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 1.3e-63 248.1 350 45.1
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 6.3e-63 245.7 186 69.9
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 4.1e-62 243.0 301 49.8
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 4.5e-61 239.6 186 68.3
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 2.9e-60 236.9 348 39.9
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 6.5e-60 235.7 318 42.1
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 1.1e-56 224.9 246 54.9
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 1.6e-45 188.0 142 69.7
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 2.6e-45 187.2 199 54.3
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 6.1e-34 149.4 120 66.7
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 1.8e-33 147.9 127 61.4
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 4.0e-33 146.7 112 62.5
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 6.3e-31 139.4 344 33.1
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 4.1e-30 136.7 104 67.3
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 9.1e-30 135.6 99 68.7
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 1.8e-25 121.3 86 70.9
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 5.4e-22 109.8 353 27.2
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 7.8e-21 105.9 168 41.7
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 2.1e-18 97.8 380 29.5
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 5.8e-16 89.7 87 55.2
Nitab4.5_0000499g0130 Nicotiana tabacum HOM05D007236 ORTHO05D009150 3.3e-11 73.9 55 69.1
Haze_16199 Corylus avellana HOM05D007236 ORTHO05D009150 2.8e-10 70.9 66 57.6
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 1.1e-09 68.9 53 60.4
TPR.G34754 Trifolium pratense HOM05D001509 ORTHO05D001361 5.4e-06 56.6 249 25.7
Rhsim04G0153100 Rhododendron simsii HOM05D001509 ORTHO05D001361 7.1e-06 56.2 243 25.1


User provided reference genes

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