Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 2.6e-127 458.8 237 100.0
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 6.5e-102 374.4 240 81.7
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 2.2e-97 359.4 240 81.2
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 1.9e-77 293.1 207 75.4
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 7.4e-74 281.2 236 64.8
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 2.2e-73 279.6 241 64.3
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 7.0e-72 274.6 241 63.5
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 1.6e-71 273.5 243 63.8
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 5.9e-71 271.6 232 62.9
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 5.9e-71 271.6 183 76.0
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 2.2e-70 269.6 239 64.9
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 8.5e-70 267.7 230 66.1
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 8.5e-70 267.7 236 64.8
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 1.1e-69 267.3 244 61.5
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 1.9e-69 266.5 243 62.6
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 3.2e-69 265.8 205 69.8
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 7.2e-69 264.6 242 60.7
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 9.4e-69 264.2 237 61.6
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 2.1e-68 263.1 239 61.5
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 2.1e-68 263.1 243 62.1
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 6.1e-68 261.5 242 62.0
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 6.1e-68 261.5 244 59.0
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 1.0e-67 260.8 243 62.1
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 1.4e-67 260.4 232 63.8
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 1.4e-67 260.4 202 68.3
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 2.3e-67 259.6 242 60.3
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 3.0e-67 259.2 229 64.6
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 4.0e-67 258.8 239 59.8
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 5.2e-67 258.5 204 68.6
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 8.8e-67 257.7 239 59.4
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 8.8e-67 257.7 239 59.0
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 1.2e-66 257.3 210 65.2
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.5e-66 256.9 239 59.4
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 1.5e-66 256.9 203 67.0
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 2.0e-66 256.5 205 67.8
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 2.0e-66 256.5 205 67.8
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 5.7e-66 255.0 211 65.9
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 7.5e-66 254.6 175 75.4
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 2.2e-65 253.1 244 60.2
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 1.4e-64 250.4 231 61.9
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.4e-64 250.4 196 67.3
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 9.1e-64 247.7 211 64.9
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 9.1e-64 247.7 236 58.9
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 1.2e-63 247.3 244 59.8
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 1.2e-63 247.3 173 73.4
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 1.6e-63 246.9 243 59.3
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 4.5e-63 245.4 239 58.2
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 4.5e-63 245.4 211 62.1
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 5.9e-63 245.0 243 60.1
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 7.7e-63 244.6 238 59.2
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 1.3e-62 243.8 289 53.3
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 2.2e-62 243.0 203 66.5
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 1.1e-61 240.7 243 58.0
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 1.1e-61 240.7 205 64.9
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 1.5e-61 240.4 165 72.7
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 3.2e-61 239.2 206 61.2
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 4.2e-61 238.8 206 64.1
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 5.5e-61 238.4 245 56.7
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 7.2e-61 238.0 245 57.6
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 7.2e-61 238.0 246 56.1
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 2.7e-60 236.1 195 66.2
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 3.6e-60 235.7 224 59.4
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 4.7e-60 235.3 243 57.6
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 4.1e-56 222.2 236 52.1
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 3.5e-55 219.2 247 55.1
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 3.5e-55 219.2 209 55.5
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 3.5e-55 219.2 209 55.5
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 3.5e-55 219.2 209 55.5
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 1.0e-54 217.6 212 54.2
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 2.9e-54 216.1 192 62.0
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 6.6e-54 214.9 174 64.9
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 8.6e-54 214.5 211 55.5
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 1.5e-53 213.8 213 54.9
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 5.5e-53 211.8 216 53.7
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 1.6e-52 210.3 208 54.8
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 2.8e-52 209.5 210 55.7
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 6.1e-52 208.4 190 58.4
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.4e-51 207.2 167 65.3
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 1.4e-51 207.2 210 53.3
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 1.5e-50 203.8 207 52.7
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 3.4e-50 202.6 208 52.4
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 5.7e-50 201.8 162 66.7
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 4.1e-48 195.7 212 51.4
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 1.6e-47 193.7 160 63.8
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 3.9e-46 189.1 209 50.7
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 7.3e-45 184.9 165 57.6
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 9.5e-45 184.5 135 71.9
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 3.6e-44 182.6 237 49.8
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 6.1e-44 181.8 159 62.3
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 3.1e-43 179.5 238 47.9
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 4.0e-43 179.1 177 54.2
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 6.0e-39 165.2 170 52.4
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 6.6e-38 161.8 197 47.7
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 1.5e-34 150.6 170 51.2
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 7.5e-34 148.3 188 45.7
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.3e-33 147.5 104 72.1
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.3e-33 147.5 104 72.1
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 2.9e-33 146.4 362 35.4
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 6.2e-28 128.6 104 65.4
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 6.8e-27 125.2 140 47.9
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 2.9e-17 93.2 107 54.2
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 2.4e-16 90.1 171 34.5
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 9.3e-16 88.2 62 72.6
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 1.3e-09 67.8 148 32.4
TAR624G1004 Trochodendron aralioides HOM05D000386 ORTHO05D414906 6.0e-07 58.9 31 90.3
Glyma.04G055801 Glycine max HOM05D007323 ORTHO05D009238 8.7e-06 55.1 99 38.4


User provided reference genes

Program Settings