Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 3.2e-153 545.4 357 100.0
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.3e-58 231.1 364 54.4
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 7.3e-49 198.7 420 37.4
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 6.2e-48 195.7 358 39.9
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 9.0e-47 191.8 393 41.0
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 2.0e-46 190.7 398 39.9
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 4.4e-46 189.5 408 37.3
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.7e-45 187.6 409 36.9
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 4.9e-45 186.0 415 38.1
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 6.4e-45 185.7 398 36.2
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 1.1e-44 184.9 420 37.4
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.4e-44 184.5 403 40.4
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 1.9e-44 184.1 405 36.5
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 1.9e-44 184.1 426 36.6
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 2.4e-44 183.7 402 40.5
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 3.2e-44 183.3 405 39.3
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 5.4e-44 182.6 413 38.3
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 5.4e-44 182.6 409 35.7
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 2.1e-43 180.6 399 38.6
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 6.0e-43 179.1 419 37.2
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 7.8e-43 178.7 385 47.5
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 1.0e-42 178.3 333 39.9
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 2.3e-42 177.2 424 35.8
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 6.6e-42 175.6 399 38.6
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 1.5e-41 174.5 423 44.9
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.5e-41 174.5 393 38.4
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 1.9e-41 174.1 410 41.5
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 2.5e-41 173.7 412 37.6
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 2.5e-41 173.7 452 34.7
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 4.3e-41 172.9 409 39.6
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 4.3e-41 172.9 354 39.3
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 5.6e-41 172.6 431 36.2
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 7.3e-41 172.2 409 39.4
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 9.6e-41 171.8 360 39.4
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.6e-40 171.0 409 38.9
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 2.8e-40 170.2 407 35.4
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 2.8e-40 170.2 436 34.9
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 6.2e-40 169.1 409 36.4
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.4e-39 167.9 386 38.1
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 1.8e-39 167.5 401 36.4
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 5.3e-39 166.0 412 38.1
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 6.9e-39 165.6 402 36.1
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 9.0e-39 165.2 362 38.4
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 1.2e-38 164.9 408 38.5
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 2.0e-38 164.1 392 39.8
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 2.0e-38 164.1 370 36.2
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 2.6e-38 163.7 370 42.2
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 3.4e-38 163.3 388 40.5
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 9.9e-38 161.8 404 37.4
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 3.8e-37 159.8 373 37.8
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 8.4e-37 158.7 387 36.7
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 4.2e-36 156.4 388 34.8
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 5.4e-36 156.0 406 34.0
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 3.5e-35 153.3 383 33.2
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 3.5e-35 153.3 364 39.0
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 4.6e-35 152.9 427 33.7
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 7.9e-35 152.1 372 47.6
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 2.3e-34 150.6 397 39.8
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 6.7e-34 149.1 322 37.3
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 1.9e-33 147.5 389 35.2
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 9.6e-33 145.2 322 42.2
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 1.3e-32 144.8 280 39.3
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 1.3e-32 144.8 330 35.2
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 2.8e-32 143.7 467 35.8
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 4.8e-32 142.9 418 35.6
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.4e-31 141.4 399 36.6
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 1.8e-31 141.0 383 33.2
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 6.9e-31 139.0 342 42.1
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 6.9e-31 139.0 356 35.7
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 9.0e-31 138.7 359 37.9
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.5e-30 137.9 334 41.0
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 2.0e-30 137.5 427 32.1
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 2.2e-29 134.0 343 38.8
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 6.4e-29 132.5 430 37.0
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.4e-28 131.3 350 33.1
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 1.9e-28 131.0 376 46.3
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 2.4e-28 130.6 410 38.3
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 1.6e-27 127.9 394 34.0
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.6e-27 127.9 279 39.4
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 6.0e-27 125.9 357 33.3
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 7.9e-27 125.6 288 42.0
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 6.7e-26 122.5 382 32.7
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 8.7e-26 122.1 298 39.9
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.5e-25 121.3 365 34.2
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 3.3e-25 120.2 308 39.9
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 3.3e-25 120.2 223 37.2
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 2.8e-24 117.1 283 35.0
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 1.5e-22 111.3 307 33.2
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 2.6e-22 110.5 361 32.4
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 1.0e-21 108.6 358 36.6
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 1.4e-20 104.8 375 40.5
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 3.2e-20 103.6 254 35.0
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.6e-19 101.3 152 41.4
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 2.1e-19 100.9 198 43.4
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 2.7e-19 100.5 238 39.5
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 4.6e-19 99.8 101 58.4
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 6.0e-19 99.4 314 30.6
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 7.9e-19 99.0 144 46.5
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 1.0e-18 98.6 126 50.0
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 1.1e-17 95.1 108 49.1
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.5e-17 94.7 187 47.1
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 9.7e-17 92.0 109 53.2
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 9.7e-17 92.0 109 53.2
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 1.3e-16 91.7 121 57.0
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 1.6e-16 91.3 124 50.0
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 3.7e-16 90.1 250 36.8
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 8.2e-16 89.0 301 38.5
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 1.4e-15 88.2 119 51.3
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 1.4e-15 88.2 188 46.8
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 9.0e-15 85.5 120 44.2
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 1.2e-14 85.1 187 47.6
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 3.4e-14 83.6 109 50.5
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 3.4e-14 83.6 109 50.5
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 5.9e-14 82.8 125 44.8
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 5.9e-14 82.8 187 45.5
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 7.6e-14 82.4 237 32.9
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 1.3e-13 81.6 109 52.3
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 6.5e-13 79.3 182 37.4
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 8.5e-13 79.0 111 48.6
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 8.5e-13 79.0 111 48.6
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 8.5e-13 79.0 251 31.1
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 1.1e-12 78.6 121 45.5
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 1.1e-12 78.6 121 45.5
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 1.1e-12 78.6 121 45.5
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 1.9e-12 77.8 176 38.6
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 2.5e-12 77.4 116 46.6
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 3.2e-12 77.0 116 46.6
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 5.5e-12 76.3 315 27.3
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 7.2e-12 75.9 116 47.4
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 7.2e-12 75.9 111 47.7
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 7.2e-12 75.9 111 47.7
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.2e-11 75.1 269 29.7
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 4.6e-11 73.2 111 46.8
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 7.9e-11 72.4 309 26.9
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 2.3e-10 70.9 42 85.7
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 1.7e-08 64.7 180 32.2
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 3.7e-08 63.5 219 31.5
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 4.8e-08 63.2 71 45.1
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.1e-07 62.0 110 40.0
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 5.3e-07 59.7 54 63.0
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 9.1e-07 58.9 338 25.1
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.2e-06 58.5 162 34.0


User provided reference genes

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