Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0309791 Helianthus annuus HOM05D000333 ORTHO05D000190 7.1e-46 186.8 88 100.0
HanXRQChr11g0329611 Helianthus annuus HOM05D000333 ORTHO05D000190 1.7e-15 85.9 110 49.1
HanXRQChr10g0308381 Helianthus annuus HOM05D000333 ORTHO05D000190 3.8e-15 84.7 101 49.5
Lsat_1_v5_gn_5_86201 Lactuca sativa HOM05D000333 ORTHO05D000190 3.6e-13 78.2 111 47.7
HanXRQChr06g0163951 Helianthus annuus HOM05D000333 ORTHO05D000190 4.3e-11 71.2 94 45.7
Lsat_1_v5_gn_8_67241 Lactuca sativa HOM05D000333 ORTHO05D000190 4.3e-11 71.2 99 47.5
ECA240G4350 Erigeron canadensis HOM05D000333 ORTHO05D000190 9.7e-11 70.1 99 42.4
Migut.K00249 Erythranthe guttata HOM05D000333 ORTHO05D000190 9.7e-11 70.1 87 46.0
Gohir.A08G090800 Gossypium hirsutum HOM05D000333 ORTHO05D000190 2.8e-10 68.6 107 41.1
FAN17G1089 Fragaria x ananassa HOM05D000333 ORTHO05D000190 6.3e-10 67.4 98 42.9
RcHm_v2.0_Chr4g0402731 Rosa chinensis HOM05D000333 ORTHO05D000190 6.3e-10 67.4 95 43.2
Gorai.004G100800 Gossypium raimondii HOM05D000333 ORTHO05D000190 8.2e-10 67.0 107 43.0
HanXRQChr05g0137231 Helianthus annuus HOM05D000333 ORTHO05D000190 8.2e-10 67.0 100 43.0
FAN07G0266 Fragaria x ananassa HOM05D000333 ORTHO05D000190 1.1e-09 66.6 98 42.9
HanXRQChr09g0254521 Helianthus annuus HOM05D000333 ORTHO05D000190 1.1e-09 66.6 110 40.0
FvH4_4g09320 Fragaria vesca HOM05D000333 ORTHO05D000190 1.4e-09 66.2 98 42.9
Gohir.D08G095000 Gossypium hirsutum HOM05D000333 ORTHO05D000190 1.4e-09 66.2 107 42.1
Cc06_g13380 Coffea canephora HOM05D000333 ORTHO05D000190 1.8e-09 65.9 118 40.7
FAN12G2398 Fragaria x ananassa HOM05D000333 ORTHO05D000190 3.1e-09 65.1 98 42.9
TWI34G0720 Tripterygium wilfordii HOM05D000333 ORTHO05D000190 3.1e-09 65.1 103 44.7
TWI63G0744 Tripterygium wilfordii HOM05D000333 ORTHO05D000190 3.1e-09 65.1 106 44.3
CSS0028929 Camellia sinensis var. sinensis HOM05D000333 ORTHO05D000190 4.1e-09 64.7 112 38.4
Lj7P472T18 Lonicera japonica HOM05D000333 ORTHO05D000190 4.1e-09 64.7 88 47.7
Ca_21213_v3 Cicer arietinum L. HOM05D000333 ORTHO05D000190 6.9e-09 63.9 97 40.2
SGA_v2.0_scaffold69G23272 Striga asiatica HOM05D000333 ORTHO05D000190 9.1e-09 63.5 97 44.3
QL02p097528 Quercus lobata HOM05D000333 ORTHO05D000190 1.2e-08 63.2 122 35.2
Prupe.1G088000 Prunus persica HOM05D000333 ORTHO05D000190 1.5e-08 62.8 109 38.5
SalBow1G8527 Salvia bowleyana HOM05D000333 ORTHO05D000190 2.0e-08 62.4 81 45.7
arahy.Tifrunner.gnm1.ann1.H2WLQ0 Arachis hypogaea HOM05D000333 ORTHO05D000190 2.6e-08 62.0 116 38.8
Gohir.D08G033700 Gossypium hirsutum HOM05D000333 ORTHO05D000190 2.6e-08 62.0 116 38.8
Lalb_Chr13g0300321 Lupinus albus HOM05D000333 ORTHO05D000190 2.6e-08 62.0 112 40.2
DCAR_009914 Daucus carota HOM05D000333 ORTHO05D000190 3.4e-08 61.6 101 42.6
ECA234G3438 Erigeron canadensis HOM05D000333 ORTHO05D000190 3.4e-08 61.6 126 39.7
TAR383G0247 Trochodendron aralioides HOM05D000333 ORTHO05D000190 3.4e-08 61.6 121 35.5
MSTRG.6207 Avicennia marina HOM05D000333 ORTHO05D000190 5.9e-08 60.8 109 36.7
Cfa013517 Carpinus fangiana HOM05D000333 ORTHO05D000190 5.9e-08 60.8 105 38.1
SGA_v2.0_scaffold301G47799 Striga asiatica HOM05D000333 ORTHO05D000190 5.9e-08 60.8 91 45.1
Gorai.004G031300 Gossypium raimondii HOM05D000333 ORTHO05D000190 7.7e-08 60.5 116 38.8
MD00G1113500 Malus domestica HOM05D000333 ORTHO05D000190 1.0e-07 60.1 110 38.2
Gohir.A08G023200 Gossypium hirsutum HOM05D000333 ORTHO05D000190 1.3e-07 59.7 116 37.9
Potri.018G094300 Populus trichocarpa HOM05D000333 ORTHO05D000190 1.7e-07 59.3 124 38.7
CiPaw.07G191200 Carya illinoinensis HOM05D000333 ORTHO05D000190 2.9e-07 58.5 73 42.5
Duzib168G0661 Durio zibethinus HOM05D000333 ORTHO05D000190 2.9e-07 58.5 122 38.5
Eucgr.C00171 Eucalyptus grandis HOM05D000333 ORTHO05D000190 2.9e-07 58.5 112 39.3
TPR.G22631 Trifolium pratense HOM05D000333 ORTHO05D000190 2.9e-07 58.5 113 37.2
Thecc.09G171300 Theobroma cacao HOM05D000333 ORTHO05D000190 3.8e-07 58.2 122 38.5
COL.COLO4_36832 Corchorus olitorius HOM05D000333 ORTHO05D000190 5.0e-07 57.8 125 37.6
MD13G1269700 Malus domestica HOM05D000333 ORTHO05D000190 5.0e-07 57.8 112 36.6
PGSC0003DMG400018743 Solanum tuberosum HOM05D000333 ORTHO05D000190 5.0e-07 57.8 116 38.8
Ah.09g229780 Amaranthus hybridus HOM05D000333 ORTHO05D000190 6.5e-07 57.4 97 37.1
Lsat_1_v5_gn_7_54420 Lactuca sativa HOM05D000333 ORTHO05D000190 6.5e-07 57.4 107 37.4
Duzib170G0300 Durio zibethinus HOM05D000333 ORTHO05D000190 8.5e-07 57.0 122 36.9
Oeu009838.1 Olea europaea HOM05D000333 ORTHO05D000190 8.5e-07 57.0 81 40.7
Oeu002542.1 Olea europaea HOM05D000333 ORTHO05D000190 1.1e-06 56.6 111 36.9
Migut.J01452 Erythranthe guttata HOM05D000333 ORTHO05D000190 1.4e-06 56.2 98 40.8
Nn2g12696 Nelumbo nucifera HOM05D000333 ORTHO05D000190 1.4e-06 56.2 116 37.9
Phvul.003G147100 Phaseolus vulgaris HOM05D000333 ORTHO05D000190 1.4e-06 56.2 114 36.8
MSTRG.19699 Avicennia marina HOM05D000333 ORTHO05D000190 1.9e-06 55.8 103 39.8
CDE06G2234 Ceratophyllum demersum HOM05D000333 ORTHO05D000190 1.9e-06 55.8 57 47.4
ECA236G3550 Erigeron canadensis HOM05D000167 ORTHO05D000994 1.9e-06 55.8 80 40.0
Sabra18G0081000 Salix brachista HOM05D000333 ORTHO05D000190 1.9e-06 55.8 124 37.1
THA.LOC104811796 Tarenaya hassleriana HOM05D000333 ORTHO05D000190 1.9e-06 55.8 86 40.7
Actinidia17320 Actinidia chinensis HOM05D000333 ORTHO05D000190 2.5e-06 55.5 101 41.6
Cpa.g.sc233.17 Carica papaya HOM05D000333 ORTHO05D000190 2.5e-06 55.5 123 35.8
Medtr4g128340 Medicago truncatula HOM05D000333 ORTHO05D000190 2.5e-06 55.5 58 48.3
Rhsim01G0006300 Rhododendron simsii HOM05D000333 ORTHO05D000190 2.5e-06 55.5 84 45.2
Oeu015459.1 Olea europaea HOM05D000333 ORTHO05D000190 3.2e-06 55.1 62 46.8
Oeu042145.1 Olea europaea HOM05D000333 ORTHO05D000190 3.2e-06 55.1 102 42.2
Rhsim03G0264000 Rhododendron simsii HOM05D000333 ORTHO05D000190 3.2e-06 55.1 109 39.4
VMungo1215G1973 Vigna mungo HOM05D000333 ORTHO05D000190 3.2e-06 55.1 113 36.3
Lalb_Chr07g0180381 Lupinus albus HOM05D000333 ORTHO05D000190 4.2e-06 54.7 118 36.4
Glyma.13G095500 Glycine max HOM05D000333 ORTHO05D000190 5.5e-06 54.3 115 35.7
Lj4g0020953 Lotus japonicus HOM05D000333 ORTHO05D000190 5.5e-06 54.3 116 35.3
vmacro02742 Vaccinium macrocarpon HOM05D000333 ORTHO05D000190 7.2e-06 53.9 65 46.2
vmacro06018 Vaccinium macrocarpon HOM05D000333 ORTHO05D000190 7.2e-06 53.9 95 40.0
Oeu042146.1 Olea europaea HOM05D000333 ORTHO05D000190 9.4e-06 53.5 108 38.9
Peaxi162Scf00992g00033 Petunia axillaris HOM05D000333 ORTHO05D000190 9.4e-06 53.5 58 44.8
Psat4g011480 Pisum sativum HOM05D000333 ORTHO05D000190 9.4e-06 53.5 119 34.5
PGR102G1008 Punica granatum HOM05D000333 ORTHO05D000190 9.4e-06 53.5 62 41.9


User provided reference genes

Program Settings