Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0309221 Helianthus annuus HOM05D008711 ORTHO05D010134 1.4e-114 416.4 231 100.0
HanXRQChr13g0421391 Helianthus annuus HOM05D008711 ORTHO05D010134 1.6e-100 369.8 182 96.7
HanXRQChr15g0469701 Helianthus annuus HOM05D008711 ORTHO05D010134 9.4e-98 360.5 227 83.3
HanXRQChr01g0007361 Helianthus annuus HOM05D008711 ORTHO05D010134 2.0e-95 352.8 227 82.4
HanXRQChr17g0570621 Helianthus annuus HOM05D008711 ORTHO05D010134 1.0e-67 260.8 183 69.4
HanXRQChr16g0520831 Helianthus annuus HOM05D008711 ORTHO05D010134 1.9e-61 240.0 165 80.6
Lsat_1_v5_gn_3_67000 Lactuca sativa HOM05D008711 ORTHO05D010134 6.2e-41 171.8 233 40.3
Lsat_1_v5_gn_1_87921 Lactuca sativa HOM05D008711 ORTHO05D010134 9.9e-39 164.5 233 38.6
Lsat_1_v5_gn_6_40041 Lactuca sativa HOM05D008711 ORTHO05D010134 2.2e-38 163.3 232 39.2
HanXRQChr05g0155991 Helianthus annuus HOM05D008711 ORTHO05D010134 1.2e-36 157.5 187 45.5
Lsat_1_v5_gn_7_49700 Lactuca sativa HOM05D008711 ORTHO05D010134 2.1e-36 156.8 231 37.7
HanXRQChr04g0112501 Helianthus annuus HOM05D008711 ORTHO05D010134 1.3e-30 137.5 183 43.2
HanXRQChr13g0411941 Helianthus annuus HOM05D008711 ORTHO05D010134 2.9e-30 136.3 183 42.6
HanXRQChr05g0153861 Helianthus annuus HOM05D008711 ORTHO05D010134 5.4e-29 132.1 186 41.9
HanXRQChr11g0328781 Helianthus annuus HOM05D008711 ORTHO05D010134 7.9e-28 128.3 191 40.3
Lsat_1_v5_gn_4_111900 Lactuca sativa HOM05D008711 ORTHO05D010134 1.0e-27 127.9 144 44.4
Lsat_1_v5_gn_5_68461 Lactuca sativa HOM05D008975 ORTHO05D010134 1.8e-27 127.1 181 39.2
HanXRQChr08g0219021 Helianthus annuus HOM05D008711 ORTHO05D010134 2.3e-27 126.7 173 43.4
Lsat_1_v5_gn_4_120840 Lactuca sativa HOM05D008711 ORTHO05D010134 7.4e-26 121.7 179 37.4
HanXRQChr02g0057461 Helianthus annuus HOM05D008711 ORTHO05D010134 2.1e-25 120.2 173 42.2
Lsat_1_v5_gn_4_114181 Lactuca sativa HOM05D008975 ORTHO05D010134 2.1e-25 120.2 161 40.4
Lsat_1_v5_gn_1_118581 Lactuca sativa HOM05D008975 ORTHO05D010134 4.0e-24 115.9 170 40.6
Lsat_1_v5_gn_1_46460 Lactuca sativa HOM05D008975 ORTHO05D010134 4.5e-23 112.5 161 39.8
Lsat_1_v5_gn_1_81260 Lactuca sativa HOM05D008975 ORTHO05D010134 6.4e-22 108.6 172 37.2
Lsat_1_v5_gn_6_66280 Lactuca sativa HOM05D008975 ORTHO05D010134 1.9e-21 107.1 188 34.6
HanXRQChr09g0267211 Helianthus annuus HOM05D008711 ORTHO05D010134 9.3e-21 104.8 182 37.4
Lsat_1_v5_gn_3_59061 Lactuca sativa HOM05D008975 ORTHO05D010134 1.0e-19 101.3 146 41.1
Lsat_1_v5_gn_7_51421 Lactuca sativa HOM05D008975 ORTHO05D010134 3.0e-19 99.8 175 36.0
HanXRQChr06g0173991 Helianthus annuus HOM05D008711 ORTHO05D010134 1.1e-18 97.8 125 45.6
Lsat_1_v5_gn_8_27541 Lactuca sativa HOM05D000374 ORTHO05D000238 1.1e-18 97.8 138 45.7
HanXRQChr02g0051481 Helianthus annuus HOM05D008711 ORTHO05D010134 1.9e-18 97.1 183 33.9
Lsat_1_v5_gn_7_35221 Lactuca sativa HOM05D008975 ORTHO05D010134 5.6e-18 95.5 190 32.6
HanXRQChr16g0506101 Helianthus annuus HOM05D008711 ORTHO05D010134 7.4e-18 95.1 168 36.3
HanXRQChr08g0228301 Helianthus annuus HOM05D008711 ORTHO05D010134 9.6e-18 94.7 123 44.7
Lsat_1_v5_gn_5_57501 Lactuca sativa HOM05D008711 ORTHO05D010134 1.3e-17 94.4 233 27.5
HanXRQChr09g0269311 Helianthus annuus HOM05D008711 ORTHO05D010134 2.1e-17 93.6 114 46.5
HanXRQChr13g0388401 Helianthus annuus HOM05D008711 ORTHO05D010134 4.8e-17 92.4 153 39.2
Lsat_1_v5_gn_5_46440 Lactuca sativa HOM05D008975 ORTHO05D010134 4.8e-17 92.4 232 34.9
Lsat_1_v5_gn_8_17220 Lactuca sativa HOM05D008711 ORTHO05D010134 4.8e-17 92.4 183 35.0
Lsat_1_v5_gn_6_44661 Lactuca sativa HOM05D008959 ORTHO05D000110 6.2e-17 92.0 171 32.7
Lsat_1_v5_gn_7_44701 Lactuca sativa HOM05D008959 ORTHO05D000110 1.1e-16 91.3 171 32.2
Lsat_1_v5_gn_3_5821 Lactuca sativa HOM05D008959 ORTHO05D000110 1.8e-16 90.5 171 32.2
Lsat_1_v5_gn_6_25761 Lactuca sativa HOM05D008959 ORTHO05D000110 1.8e-16 90.5 171 32.2
Lsat_1_v5_gn_3_2021 Lactuca sativa HOM05D008959 ORTHO05D000110 2.4e-16 90.1 171 32.2
Lsat_1_v5_gn_7_64800 Lactuca sativa HOM05D008959 ORTHO05D000110 2.4e-16 90.1 171 32.2
Lsat_1_v5_gn_7_39260 Lactuca sativa HOM05D008959 ORTHO05D000110 2.6e-15 86.7 171 31.0
Lsat_1_v5_gn_4_47461 Lactuca sativa HOM05D008959 ORTHO05D000110 3.4e-15 86.3 150 36.0
Lsat_1_v5_gn_6_58100 Lactuca sativa HOM05D008959 ORTHO05D000110 7.6e-15 85.1 171 32.2
Lsat_1_v5_gn_9_114661 Lactuca sativa HOM05D008975 ORTHO05D010134 4.9e-14 82.4 122 38.5
ECA238G0956 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.5e-14 82.0 167 31.7
Lsat_1_v5_gn_7_74920 Lactuca sativa HOM05D008975 ORTHO05D010134 2.5e-13 80.1 177 32.8
Lsat_1_v5_gn_7_98181 Lactuca sativa HOM05D008959 ORTHO05D000110 4.2e-13 79.3 150 34.7
Lsat_1_v5_gn_1_126560 Lactuca sativa HOM05D008959 ORTHO05D000110 2.7e-12 76.6 171 30.4
Lsat_1_v5_gn_3_96041 Lactuca sativa HOM05D008959 ORTHO05D000110 2.7e-12 76.6 170 27.6
Lsat_1_v5_gn_1_82100 Lactuca sativa HOM05D008975 ORTHO05D010134 7.9e-12 75.1 118 38.1
Lsat_1_v5_gn_5_60441 Lactuca sativa HOM05D008711 ORTHO05D010134 1.0e-11 74.7 84 40.5
Manes.12G049491 Manihot esculenta HOM05D009368 ORTHO05D000110 3.0e-11 73.2 88 42.0
Lsat_1_v5_gn_5_49621 Lactuca sativa HOM05D008975 ORTHO05D010134 3.9e-11 72.8 123 39.0
Lsat_1_v5_gn_1_81341 Lactuca sativa HOM05D008975 ORTHO05D010134 6.7e-11 72.0 128 35.2
Manes.12G096601 Manihot esculenta HOM05D009368 ORTHO05D000110 1.9e-10 70.5 85 44.7
Lsat_1_v5_gn_3_82660 Lactuca sativa HOM05D008975 ORTHO05D010134 2.5e-10 70.1 126 34.1
Psat2g112240 Pisum sativum HOM05D013784 ORTHO05D000110 3.3e-10 69.7 139 31.7
ECA247G3155 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.3e-10 69.3 175 30.3
Manes.05G086382 Manihot esculenta HOM05D009368 ORTHO05D000110 4.3e-10 69.3 163 31.3
Manes.09G086083 Manihot esculenta HOM05D009368 ORTHO05D000110 1.6e-09 67.4 88 40.9
ECA238G3396 Erigeron canadensis HOM05D008959 ORTHO05D000110 2.2e-09 67.0 175 28.6
ECA238G4150 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.2e-09 67.0 169 29.0
arahy.Tifrunner.gnm1.ann1.PJQ1Y5 Arachis hypogaea HOM05D000420 ORTHO05D000110 1.8e-08 63.9 175 27.4
TPR.G27572 Trifolium pratense HOM05D013784 ORTHO05D000110 3.1e-08 63.2 139 25.9
Manes.08G043150 Manihot esculenta HOM05D009368 ORTHO05D000110 9.0e-08 61.6 74 41.9
DCAR_027889 Daucus carota HOM05D012986 ORTHO05D016269 1.2e-07 61.2 140 28.6
Lsat_1_v5_gn_5_88960 Lactuca sativa HOM05D008975 ORTHO05D010134 1.5e-07 60.8 113 35.4
Sc14g0002960 Simmondsia chinensis HOM05D015904 ORTHO05D000110 1.5e-07 60.8 178 27.5
HanXRQChr05g0146391 Helianthus annuus HOM05D008711 ORTHO05D010134 2.0e-07 60.5 63 42.9
HanXRQChr12g0356521 Helianthus annuus HOM05D008711 ORTHO05D010134 2.0e-07 60.5 63 42.9
Lsat_1_v5_gn_7_25341 Lactuca sativa HOM05D008975 ORTHO05D010134 2.0e-07 60.5 64 45.3
arahy.Tifrunner.gnm1.ann1.N7XK3P Arachis hypogaea HOM05D000420 ORTHO05D000110 3.4e-07 59.7 81 37.0
Lsat_1_v5_gn_1_29721 Lactuca sativa HOM05D008959 ORTHO05D045209 3.4e-07 59.7 61 47.5
Lsat_1_v5_gn_8_156001 Lactuca sativa HOM05D008975 ORTHO05D010134 4.5e-07 59.3 76 36.8
Nitab4.5_0002163g0040 Nicotiana tabacum HOM05D009597 ORTHO05D000110 5.9e-07 58.9 83 39.8
TWI75G1247 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 7.7e-07 58.5 84 35.7
Lsat_1_v5_gn_3_37620 Lactuca sativa HOM05D008959 ORTHO05D000110 1.0e-06 58.2 137 32.8
Lsat_1_v5_gn_7_107900 Lactuca sativa HOM05D008975 ORTHO05D010134 1.0e-06 58.2 142 39.4
ECA236G0159 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.3e-06 57.8 188 30.3
ECA234G1021 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.9e-06 56.6 115 32.2
Lsat_1_v5_gn_9_88801 Lactuca sativa HOM05D008975 ORTHO05D010134 2.9e-06 56.6 145 35.9
Nitab4.5_0012054g0020 Nicotiana tabacum HOM05D009597 ORTHO05D000110 2.9e-06 56.6 83 38.6
Lsat_1_v5_gn_3_99801 Lactuca sativa HOM05D014942 ORTHO05D004974 3.8e-06 56.2 56 48.2
Hund24667 Selenicereus undatus HOM05D006177 ORTHO05D006083 3.8e-06 56.2 194 28.9
Lsat_1_v5_gn_4_73441 Lactuca sativa HOM05D008975 ORTHO05D010134 5.0e-06 55.8 160 25.6
Hund19566 Selenicereus undatus HOM05D006177 ORTHO05D006083 5.0e-06 55.8 194 28.9
ECA238G1936 Erigeron canadensis HOM05D000006 ORTHO05D000062 6.5e-06 55.5 78 41.0
Hund26083 Selenicereus undatus HOM05D006177 ORTHO05D006083 6.5e-06 55.5 194 28.9


User provided reference genes

Program Settings