Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 1.2e-56 223.0 114 100.0
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 4.7e-34 147.9 114 69.3
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 3.8e-23 111.7 118 50.8
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 4.9e-23 111.3 101 55.4
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 6.4e-23 110.9 113 53.1
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.4e-22 109.8 101 54.5
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 5.4e-22 107.8 110 52.7
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 1.6e-21 106.3 113 50.4
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 2.1e-21 105.9 107 52.3
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 2.1e-21 105.9 79 65.8
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 2.7e-21 105.5 107 51.4
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 2.7e-21 105.5 81 64.2
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 3.5e-21 105.1 103 49.5
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 4.6e-21 104.8 113 49.6
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 4.6e-21 104.8 99 53.5
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 4.6e-21 104.8 113 49.6
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 6.0e-21 104.4 102 52.9
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 7.8e-21 104.0 106 52.8
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.0e-20 103.6 110 47.3
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 1.0e-20 103.6 104 54.8
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 1.3e-20 103.2 113 49.6
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 1.3e-20 103.2 102 52.0
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.3e-20 103.2 113 48.7
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.7e-20 102.8 113 48.7
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.7e-20 102.8 108 51.9
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 1.7e-20 102.8 108 51.9
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 1.7e-20 102.8 102 50.0
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 1.7e-20 102.8 113 51.3
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 2.3e-20 102.4 83 60.2
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 2.3e-20 102.4 113 49.6
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 3.0e-20 102.1 102 50.0
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 3.0e-20 102.1 113 48.7
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 3.9e-20 101.7 113 47.8
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 5.1e-20 101.3 124 45.2
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 6.6e-20 100.9 111 48.6
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 6.6e-20 100.9 60 71.7
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 6.6e-20 100.9 84 56.0
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 6.6e-20 100.9 113 49.6
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 8.7e-20 100.5 115 50.4
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 8.7e-20 100.5 120 47.5
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 1.1e-19 100.1 113 51.3
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 1.1e-19 100.1 101 49.5
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.5e-19 99.8 106 48.1
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.5e-19 99.8 102 48.0
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.5e-19 99.8 103 48.5
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 1.5e-19 99.8 113 49.6
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 1.9e-19 99.4 87 51.7
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.5e-19 99.0 113 46.9
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 3.3e-19 98.6 73 58.9
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 3.3e-19 98.6 94 47.9
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 3.3e-19 98.6 109 47.7
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 3.3e-19 98.6 106 50.0
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 3.3e-19 98.6 115 49.6
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 3.3e-19 98.6 113 49.6
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 4.3e-19 98.2 109 47.7
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 4.3e-19 98.2 114 50.0
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 4.3e-19 98.2 113 49.6
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 4.3e-19 98.2 117 48.7
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 4.3e-19 98.2 113 47.8
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 5.6e-19 97.8 118 47.5
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 5.6e-19 97.8 103 47.6
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 7.3e-19 97.4 116 46.6
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 7.3e-19 97.4 116 46.6
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 7.3e-19 97.4 110 50.0
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 7.3e-19 97.4 117 47.9
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 7.3e-19 97.4 89 55.1
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 7.3e-19 97.4 79 59.5
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 7.3e-19 97.4 113 46.0
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 9.6e-19 97.1 104 50.0
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 1.3e-18 96.7 117 47.9
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 1.3e-18 96.7 104 49.0
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.3e-18 96.7 102 49.0
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 1.6e-18 96.3 105 51.4
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.1e-18 95.9 83 56.6
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 2.1e-18 95.9 109 48.6
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 2.1e-18 95.9 107 51.4
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 2.1e-18 95.9 110 46.4
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 2.8e-18 95.5 82 57.3
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 2.8e-18 95.5 111 50.5
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.8e-18 95.5 112 46.4
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 4.8e-18 94.7 115 47.8
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 4.8e-18 94.7 114 50.0
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 4.8e-18 94.7 114 49.1
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 8.1e-18 94.0 115 47.8
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 8.1e-18 94.0 115 47.8
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 8.1e-18 94.0 115 47.8
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 8.1e-18 94.0 104 50.0
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 8.1e-18 94.0 113 43.4
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 8.1e-18 94.0 110 45.5
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 1.4e-17 93.2 116 46.6
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 1.8e-17 92.8 113 46.9
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.8e-17 92.8 114 45.6
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.8e-17 92.8 108 48.1
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.8e-17 92.8 107 44.9
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.8e-17 92.8 89 52.8
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.8e-17 92.8 89 52.8
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 1.8e-17 92.8 100 45.0
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 2.4e-17 92.4 82 53.7
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.4e-17 92.4 105 49.5
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 2.4e-17 92.4 104 46.2
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 3.1e-17 92.0 84 56.0
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 5.3e-17 91.3 80 52.5
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 9.0e-17 90.5 80 52.5
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 9.0e-17 90.5 108 47.2
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 1.2e-16 90.1 88 53.4
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 1.2e-16 90.1 106 47.2
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 1.5e-16 89.7 103 47.6
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.5e-16 89.7 63 61.9
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 1.5e-16 89.7 98 52.0
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 2.0e-16 89.4 113 46.0
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 2.6e-16 89.0 103 46.6
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 2.6e-16 89.0 115 40.9
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 3.4e-16 88.6 69 58.0
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 1.3e-15 86.7 95 44.2
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 4.9e-15 84.7 67 58.2
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.1e-14 83.6 93 44.1
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.1e-14 83.6 93 44.1
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 1.9e-14 82.8 72 51.4
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 3.2e-14 82.0 113 42.5
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 1.2e-13 80.1 63 58.7
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 6.7e-12 74.3 61 57.4
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 2.5e-11 72.4 84 39.3
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 6.2e-10 67.8 75 41.3
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 9.0e-09 63.9 53 50.9
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 3.4e-08 62.0 77 35.1
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 3.4e-08 62.0 71 40.8


User provided reference genes

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