Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 8.5e-76 287.0 148 100.0
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.7e-63 246.1 148 84.5
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 1.4e-57 226.5 151 81.5
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 8.8e-57 223.8 151 80.1
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 5.2e-41 171.4 153 64.1
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 6.8e-41 171.0 151 66.9
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.5e-40 169.9 153 63.4
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.2e-39 166.0 148 65.5
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 6.3e-39 164.5 150 66.0
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.1e-38 163.7 149 65.1
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.1e-38 163.7 148 66.2
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 7.8e-37 157.5 126 73.8
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 7.8e-37 157.5 138 68.1
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.7e-36 156.4 148 61.5
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 1.7e-36 156.4 153 61.4
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 5.0e-36 154.8 153 63.4
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 9.5e-35 150.6 140 66.4
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.8e-34 149.1 118 69.5
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 2.8e-34 149.1 117 70.1
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 4.7e-34 148.3 153 57.5
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 6.1e-34 147.9 153 57.5
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 6.1e-34 147.9 119 71.4
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 8.0e-34 147.5 153 57.5
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.0e-33 145.2 157 59.9
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 8.9e-33 144.1 127 66.1
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 2.6e-32 142.5 129 64.3
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 2.6e-32 142.5 120 66.7
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 4.4e-32 141.7 148 58.1
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.5e-32 141.0 148 59.5
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 9.8e-32 140.6 151 57.0
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 1.3e-31 140.2 141 56.7
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.3e-31 140.2 148 60.1
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 2.2e-31 139.4 149 53.7
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.9e-31 139.0 150 59.3
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.9e-31 139.0 150 59.3
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.9e-31 139.0 112 68.8
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 6.4e-31 137.9 106 72.6
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 8.3e-31 137.5 152 57.2
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 8.3e-31 137.5 148 59.5
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 8.3e-31 137.5 150 58.7
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 1.1e-30 137.1 108 70.4
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 2.4e-30 136.0 135 63.7
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 3.2e-30 135.6 152 57.9
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 3.2e-30 135.6 106 68.9
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 4.1e-30 135.2 146 58.9
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 5.4e-30 134.8 108 70.4
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 7.0e-30 134.4 124 62.9
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 9.2e-30 134.0 131 59.5
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 9.2e-30 134.0 150 54.7
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 9.2e-30 134.0 112 67.9
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 2.0e-29 132.9 150 58.0
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.0e-29 132.9 114 69.3
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 2.0e-29 132.9 153 58.8
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 2.0e-29 132.9 111 69.4
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 2.7e-29 132.5 111 71.2
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 2.7e-29 132.5 118 63.6
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 2.7e-29 132.5 111 71.2
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 4.6e-29 131.7 149 57.0
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 4.6e-29 131.7 128 60.9
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 4.6e-29 131.7 118 63.6
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 6.0e-29 131.3 154 55.8
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 6.0e-29 131.3 137 59.1
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 7.8e-29 131.0 108 67.6
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 7.8e-29 131.0 127 63.0
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.0e-28 130.6 139 56.8
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.0e-28 130.6 139 56.8
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.0e-28 130.6 121 62.8
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.3e-28 130.2 144 59.7
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.3e-28 130.2 111 66.7
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.3e-28 130.2 121 64.5
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.3e-28 130.2 118 63.6
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.7e-28 129.8 129 58.1
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.7e-28 129.8 129 58.1
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.7e-28 129.8 148 56.8
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 2.3e-28 129.4 108 63.9
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.3e-28 129.4 118 63.6
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 2.3e-28 129.4 119 65.5
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 3.0e-28 129.0 111 67.6
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 3.9e-28 128.6 108 65.7
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.9e-28 128.6 126 62.7
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 3.9e-28 128.6 134 58.2
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 3.9e-28 128.6 134 60.4
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 5.0e-28 128.3 111 69.4
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 5.0e-28 128.3 106 69.8
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 8.6e-28 127.5 108 64.8
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 1.1e-27 127.1 149 52.3
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.1e-27 127.1 132 56.8
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.5e-27 126.7 149 52.3
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.5e-27 126.7 149 52.3
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.5e-27 126.7 125 63.2
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 146 54.8
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 110 66.4
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 1.9e-27 126.3 134 59.7
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.9e-27 126.3 133 57.1
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 1.9e-27 126.3 130 58.5
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 2.5e-27 125.9 117 62.4
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 4.3e-27 125.2 139 55.4
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 9.5e-27 124.0 120 61.7
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 1.2e-26 123.6 80 76.2
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.6e-26 123.2 83 78.3
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.8e-26 122.5 106 66.0
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 8.9e-25 117.5 100 69.0
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 1.2e-24 117.1 129 53.5
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.5e-24 116.7 128 56.2
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 2.4e-22 109.4 129 51.2
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 2.4e-22 109.4 103 62.1
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 5.4e-22 108.2 66 86.4
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 5.4e-22 108.2 66 86.4
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 1.0e-20 104.0 64 82.8
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 1.7e-20 103.2 85 65.9
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 6.6e-20 101.3 87 69.0
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 1.1e-19 100.5 113 52.2
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.5e-19 100.1 221 38.0
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.3e-19 99.0 108 56.5
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 3.3e-19 99.0 102 58.8
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.4e-17 93.6 78 65.4
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.5e-16 90.1 73 63.0
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.5e-16 90.1 122 50.8
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 7.5e-16 87.8 117 48.7
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.3e-11 72.4 61 62.3
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 3.1e-09 65.9 68 55.9
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 5.2e-09 65.1 81 49.4
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 3.4e-08 62.4 92 40.2
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 4.9e-07 58.5 61 49.2
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 9.2e-06 54.3 47 70.2


User provided reference genes

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