Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 4.9e-90 334.3 158 100.0
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 1.4e-73 279.6 154 87.7
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 1.1e-57 226.9 149 70.5
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 2.5e-57 225.7 154 70.8
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 5.5e-57 224.6 160 71.2
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 1.6e-56 223.0 142 71.8
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 3.6e-56 221.9 162 70.4
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 4.7e-56 221.5 149 69.8
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 8.0e-56 220.7 138 73.2
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 1.0e-55 220.3 150 67.3
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 1.0e-55 220.3 158 67.1
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 1.4e-55 219.9 149 71.8
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 1.4e-55 219.9 158 64.6
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 1.8e-55 219.5 146 70.5
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 4.0e-55 218.4 156 69.9
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 5.2e-55 218.0 157 70.1
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 5.2e-55 218.0 153 67.3
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 6.7e-55 217.6 160 64.4
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 6.7e-55 217.6 153 67.3
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 6.7e-55 217.6 140 72.1
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 8.8e-55 217.2 156 69.2
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 8.8e-55 217.2 156 69.2
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 8.8e-55 217.2 147 70.7
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 1.1e-54 216.9 158 68.4
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 1.5e-54 216.5 153 67.3
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 1.5e-54 216.5 157 65.6
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 2.6e-54 215.7 147 71.4
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 2.6e-54 215.7 147 69.4
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 2.6e-54 215.7 153 66.7
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 3.3e-54 215.3 148 66.2
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 3.3e-54 215.3 148 66.2
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 3.3e-54 215.3 140 70.7
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 4.4e-54 214.9 147 68.7
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 4.4e-54 214.9 148 69.6
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 5.7e-54 214.5 159 66.0
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 7.5e-54 214.2 165 66.1
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 7.5e-54 214.2 142 66.9
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 7.5e-54 214.2 154 68.2
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 9.7e-54 213.8 156 67.9
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 9.7e-54 213.8 156 67.9
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 9.7e-54 213.8 156 67.9
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 9.7e-54 213.8 148 65.5
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 9.7e-54 213.8 148 68.2
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 1.7e-53 213.0 149 66.4
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 2.2e-53 212.6 157 68.8
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 2.8e-53 212.2 144 68.1
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 8.2e-53 210.7 139 69.8
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 1.4e-52 209.9 154 62.3
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 1.8e-52 209.5 149 65.8
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 1.8e-52 209.5 137 69.3
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 2.4e-52 209.1 139 69.8
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 1.2e-51 206.8 155 64.5
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 1.6e-51 206.5 148 66.2
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 2.0e-51 206.1 140 70.0
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 2.0e-51 206.1 146 63.7
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 2.0e-51 206.1 142 67.6
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 5.9e-51 204.5 149 67.8
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 1.0e-50 203.8 145 68.3
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 1.3e-50 203.4 146 68.5
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 1.3e-50 203.4 155 65.2
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 1.3e-50 203.4 149 67.1
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 1.7e-50 203.0 139 66.2
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 2.9e-50 202.2 145 67.6
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 2.9e-50 202.2 156 62.8
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 3.8e-50 201.8 154 61.7
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 6.5e-50 201.1 138 67.4
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 2.5e-49 199.1 154 63.0
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 4.2e-49 198.4 151 63.6
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 7.2e-49 197.6 141 64.5
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 7.2e-49 197.6 144 63.9
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 1.6e-48 196.4 146 64.4
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 2.7e-48 195.7 128 71.1
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 2.7e-48 195.7 146 66.4
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 3.6e-48 195.3 139 63.3
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 4.7e-48 194.9 141 63.1
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 6.1e-48 194.5 135 67.4
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 1.0e-47 193.7 147 66.0
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 1.4e-47 193.4 138 65.9
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 1.8e-47 193.0 147 66.0
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.5e-46 189.9 149 61.1
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 8.3e-45 184.1 137 66.4
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 1.1e-44 183.7 137 67.2
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 2.4e-44 182.6 144 60.4
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 3.1e-44 182.2 157 61.1
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 5.4e-44 181.4 135 63.0
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 1.3e-42 176.8 142 57.0
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 7.2e-41 171.0 132 57.6
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 1.6e-40 169.9 147 56.5
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 2.1e-40 169.5 147 56.5
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 4.0e-39 165.2 152 55.9
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 6.3e-37 157.9 103 69.9
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.1e-36 157.1 146 54.1
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 9.2e-36 154.1 148 53.4
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 1.3e-34 150.2 134 51.5
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 3.3e-33 145.6 146 51.4
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 5.6e-33 144.8 147 52.4
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 2.1e-32 142.9 133 51.1
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 1.0e-31 140.6 133 50.4
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 2.3e-31 139.4 147 49.7
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 4.0e-31 138.7 134 51.5
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 6.8e-31 137.9 133 48.9
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.2e-30 137.1 103 64.1
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 2.9e-29 132.5 105 63.8
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 3.7e-29 132.1 96 66.7
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 3.9e-26 122.1 91 64.8
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 1.2e-24 117.1 81 72.8
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 5.8e-22 108.2 133 45.1
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 1.3e-21 107.1 118 49.2
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 9.2e-20 100.9 103 53.4
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 3.6e-16 89.0 163 34.4
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 1.4e-12 77.0 73 53.4
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 4.1e-12 75.5 154 34.4


User provided reference genes

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