Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 2.1e-202 708.8 347 100.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 9.0e-161 570.5 327 81.7
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.6e-157 559.7 325 81.2
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.7e-157 558.9 323 82.0
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 6.0e-157 557.8 329 80.5
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 3.9e-156 555.1 328 80.8
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 3.9e-156 555.1 323 82.7
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.5e-155 552.4 325 80.6
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 4.3e-155 551.6 328 79.6
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 7.4e-155 550.8 326 79.8
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 1.4e-153 546.6 327 78.6
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 3.4e-152 542.0 325 77.2
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.7e-151 539.7 323 79.6
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 4.2e-150 535.0 328 77.4
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 5.5e-150 534.6 325 76.3
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 9.3e-150 533.9 325 77.8
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.7e-149 532.3 325 78.2
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.6e-149 531.6 325 77.8
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 7.9e-149 530.8 325 77.8
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.9e-147 526.2 326 76.7
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 2.5e-147 525.8 325 76.0
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 9.7e-147 523.9 289 84.4
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.6e-146 523.1 326 74.8
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 6.3e-146 521.2 323 74.6
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 2.2e-143 512.7 289 81.3
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 5.0e-143 511.5 326 74.8
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 8.5e-143 510.8 326 74.2
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.1e-142 510.4 326 74.5
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.1e-142 510.4 328 75.3
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 4.2e-142 508.4 326 73.6
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 4.2e-142 508.4 326 73.9
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.3e-140 502.7 326 74.2
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 6.7e-140 501.1 331 75.8
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 1.2e-136 490.3 326 73.0
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.1e-134 483.8 325 73.2
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 7.2e-134 481.1 325 72.3
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 1.1e-131 473.8 319 70.2
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.0e-131 473.0 336 68.8
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 4.4e-131 471.9 325 71.1
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 4.4e-131 471.9 334 68.3
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 5.7e-131 471.5 323 70.3
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 5.7e-131 471.5 325 70.8
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.3e-130 470.3 328 67.4
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 2.8e-130 469.2 325 71.1
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 2.8e-130 469.2 328 70.4
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 2.8e-130 469.2 321 69.5
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 3.7e-130 468.8 328 70.7
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 3.7e-130 468.8 325 68.9
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.7e-130 468.8 253 85.0
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 4.8e-130 468.4 328 69.5
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 8.2e-130 467.6 329 70.2
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 7.0e-129 464.5 328 69.8
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 7.0e-129 464.5 325 69.5
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 9.1e-129 464.2 327 69.4
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 1.5e-128 463.4 325 70.5
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 2.0e-128 463.0 325 68.9
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 2.6e-128 462.6 325 70.2
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 3.5e-128 462.2 328 69.5
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 4.5e-128 461.8 287 75.6
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 1.7e-127 459.9 325 68.6
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 1.7e-127 459.9 325 69.5
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 2.9e-127 459.1 328 67.7
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.9e-127 459.1 323 69.7
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 5.0e-127 458.4 325 68.0
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.9e-126 456.4 325 68.0
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 5.5e-126 454.9 328 67.4
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.5e-126 454.9 325 67.4
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.2e-125 453.8 325 68.6
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.1e-125 453.0 325 67.4
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.7e-125 452.6 326 68.7
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 3.6e-125 452.2 322 68.3
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 4.7e-125 451.8 325 67.7
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 3.9e-124 448.7 329 67.2
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.5e-123 446.8 330 67.6
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.6e-123 446.0 328 67.4
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.6e-123 446.0 329 68.4
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 3.3e-123 445.7 370 61.1
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 5.7e-123 444.9 328 67.1
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.2e-122 443.0 328 66.8
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 4.8e-122 441.8 325 65.2
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 6.3e-122 441.4 325 65.8
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 5.3e-121 438.3 328 64.9
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 2.0e-120 436.4 326 62.0
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 4.5e-120 435.3 346 62.7
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 1.0e-119 434.1 328 63.4
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.0e-119 434.1 328 63.7
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 1.3e-119 433.7 325 64.6
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.7e-119 433.3 328 63.4
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 6.5e-119 431.4 253 80.2
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 3.2e-118 429.1 322 65.2
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 4.7e-117 425.2 263 76.8
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 6.1e-117 424.9 329 63.8
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 2.3e-116 422.9 331 61.9
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.0e-116 422.2 328 61.9
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 3.4e-115 419.1 326 64.1
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.1e-110 404.1 330 59.7
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.2e-109 400.6 245 79.2
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.8e-105 386.7 311 63.0
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 5.9e-104 381.7 273 71.1
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 4.9e-98 362.1 328 56.1
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 3.9e-95 352.4 321 52.6
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 4.3e-94 349.0 325 53.5
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 3.2e-89 332.8 260 65.0
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 9.2e-89 331.3 374 44.1
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 2.0e-88 330.1 228 71.1
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 8.6e-87 324.7 280 62.1
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 4.9e-82 308.9 250 63.2
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 5.8e-75 285.4 252 58.7
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 8.1e-69 265.0 332 40.1
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.5e-67 260.8 247 51.0
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.2e-58 230.3 192 61.5
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 1.1e-54 218.0 190 55.3
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 4.3e-54 216.1 139 72.7
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 3.8e-50 203.0 124 71.8
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 1.1e-46 191.4 127 70.1
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 2.3e-39 167.2 95 81.1
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 7.7e-27 125.6 151 46.4
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 6.7e-23 112.5 125 48.8
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 2.9e-18 97.1 88 60.2
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 1.4e-15 88.2 59 69.5
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.6e-08 64.7 47 63.8
Prupe.6G259700 Prunus persica HOM05D037056 ORTHO05D335045 2.1e-08 64.3 48 64.6
Prupe.1G327800 Prunus persica HOM05D037056 ORTHO05D335556 4.7e-08 63.2 48 64.6
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 8.0e-08 62.4 57 56.1
Prupe.8G103600 Prunus persica HOM05D037056 ORTHO05D336041 1.4e-07 61.6 48 62.5
Thecc.02G275700 Theobroma cacao HOM05D002893 ORTHO05D003387 1.1e-06 58.5 102 33.3
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 2.0e-06 57.8 123 35.8


User provided reference genes

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