Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 1.9e-151 539.3 298 100.0
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 6.7e-88 328.2 266 72.9
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.1e-85 320.9 260 72.7
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 2.2e-70 270.0 272 62.1
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 1.9e-66 256.9 191 76.4
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 3.2e-66 256.1 188 77.1
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 4.2e-66 255.8 240 65.0
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 2.1e-65 253.4 188 77.1
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 4.7e-65 252.3 259 61.0
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 4.7e-65 252.3 194 73.2
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 6.1e-65 251.9 263 58.6
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 5.2e-64 248.8 178 77.5
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 5.2e-64 248.8 178 77.5
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 4.4e-63 245.7 212 67.9
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 4.4e-63 245.7 194 71.1
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 5.7e-63 245.4 201 70.1
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 7.4e-63 245.0 260 59.6
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 3.7e-62 242.7 234 60.7
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 5.3e-61 238.8 247 61.1
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 5.3e-61 238.8 293 55.3
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 5.3e-61 238.8 261 57.1
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 7.0e-61 238.4 207 68.1
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 1.6e-60 237.3 207 67.1
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 1.6e-60 237.3 292 56.8
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 5.9e-60 235.3 257 58.0
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 7.7e-60 235.0 207 67.6
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 7.7e-60 235.0 209 66.5
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 1.0e-59 234.6 271 56.8
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 1.3e-59 234.2 253 56.9
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 1.7e-59 233.8 268 54.5
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 1.7e-59 233.8 268 55.6
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 1.7e-59 233.8 265 56.6
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 8.5e-59 231.5 207 64.3
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.9e-58 230.3 199 65.8
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 1.9e-58 230.3 230 60.9
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 1.9e-58 230.3 209 63.6
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 2.5e-58 229.9 230 62.2
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 2.5e-58 229.9 269 56.9
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 3.2e-58 229.6 267 56.2
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 5.5e-58 228.8 233 59.2
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 7.2e-58 228.4 268 55.6
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 9.4e-58 228.0 263 54.8
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 1.2e-57 227.6 261 56.3
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 2.7e-57 226.5 260 54.6
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 6.1e-57 225.3 261 57.9
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 8.0e-57 224.9 284 54.6
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 8.0e-57 224.9 323 49.5
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 1.0e-56 224.6 290 54.1
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 1.0e-56 224.6 273 55.7
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.4e-56 224.2 261 57.5
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 1.4e-56 224.2 261 57.5
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 1.4e-56 224.2 211 62.6
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 1.8e-56 223.8 261 55.6
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 3.0e-56 223.0 251 57.4
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.0e-56 223.0 301 51.5
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.0e-55 220.3 264 56.8
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 3.3e-55 219.5 237 59.5
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 3.3e-55 219.5 260 54.6
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 4.4e-55 219.2 204 64.2
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 5.7e-55 218.8 237 58.6
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 1.3e-54 217.6 261 55.6
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 1.7e-54 217.2 266 54.1
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 1.7e-54 217.2 251 57.0
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.2e-54 216.9 290 53.4
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 2.8e-54 216.5 274 52.9
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 8.2e-54 214.9 212 60.8
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 1.1e-53 214.5 263 53.2
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 2.4e-53 213.4 266 53.4
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 5.3e-53 212.2 269 53.2
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 9.1e-53 211.5 270 51.9
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 1.6e-52 210.7 266 52.6
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 1.6e-52 210.7 266 52.6
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 1.6e-52 210.7 266 52.6
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 2.0e-52 210.3 210 58.6
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 4.5e-52 209.1 266 52.3
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 7.7e-52 208.4 287 50.9
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.7e-51 207.2 267 51.7
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.7e-51 207.2 267 51.7
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 2.2e-51 206.8 257 52.9
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 3.8e-51 206.1 259 53.3
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 5.0e-51 205.7 269 52.4
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 5.0e-51 205.7 272 51.8
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 5.0e-51 205.7 240 57.1
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 6.5e-51 205.3 210 59.5
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 1.5e-50 204.1 206 61.2
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 7.2e-50 201.8 240 53.8
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 8.8e-48 194.9 143 77.6
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 1.5e-47 194.1 204 57.4
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 1.5e-47 194.1 204 57.4
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 3.7e-46 189.5 251 53.0
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 4.8e-46 189.1 189 58.7
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.8e-46 189.1 267 50.9
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 1.4e-45 187.6 265 48.3
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.4e-45 186.8 267 50.6
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 7.0e-45 185.3 193 58.5
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 3.5e-44 183.0 203 61.6
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 1.7e-43 180.6 210 53.3
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 9.5e-42 174.9 180 62.2
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 1.6e-41 174.1 184 62.0
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 4.4e-39 166.0 168 63.1
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 7.5e-39 165.2 284 46.8
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 9.8e-39 164.9 186 55.9
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 2.2e-38 163.7 150 61.3
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 3.1e-37 159.8 264 44.3
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 5.0e-35 152.5 130 68.5
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 2.5e-34 150.2 257 44.7
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 5.6e-34 149.1 252 45.2
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 4.4e-31 139.4 196 48.0
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 1.7e-30 137.5 206 44.7
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 8.3e-30 135.2 205 45.9
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 1.4e-29 134.4 129 61.2
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 1.8e-29 134.0 208 44.7
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 2.0e-28 130.6 211 47.9
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 1.7e-27 127.5 115 63.5
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 2.5e-26 123.6 102 67.6
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 4.7e-25 119.4 132 56.1
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 4.7e-25 119.4 132 56.1
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 4.4e-23 112.8 166 45.8
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 1.7e-22 110.9 153 50.3
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 6.0e-20 102.4 225 37.3
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 1.3e-19 101.3 133 49.6
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 2.3e-19 100.5 74 75.7
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 5.0e-19 99.4 180 44.4
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 1.1e-18 98.2 228 39.5
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 7.3e-18 95.5 140 50.7
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 2.0e-15 87.4 137 47.4
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 3.7e-14 83.2 70 68.6
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 8.3e-14 82.0 58 75.9
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 4.6e-12 76.3 59 69.5
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 1.7e-11 74.3 184 35.9
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 5.1e-11 72.8 149 31.5
Lsat_1_v5_gn_5_140640 Lactuca sativa HOM05D005433 ORTHO05D006675 6.6e-11 72.4 47 76.6
CARHR090070 Cardamine hirsuta HOM05D005433 ORTHO05D006675 5.8e-07 59.3 69 56.5
EL10Ac1g01129 Beta vulgaris HOM05D005433 ORTHO05D006675 6.4e-06 55.8 34 82.4
C01p49410 Brassica napus HOM05D005433 ORTHO05D040690 6.4e-06 55.8 138 37.7


User provided reference genes

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