Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 0.0e+00 1201.4 629 100.0
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 1.1e-204 717.2 616 63.5
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 3.5e-131 473.0 597 46.7
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.8e-122 444.1 595 44.7
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 6.7e-122 442.2 598 44.8
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 1.9e-121 440.7 596 44.1
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 2.5e-121 440.3 586 44.9
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 9.7e-121 438.3 591 45.0
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 5.9e-118 429.1 574 43.7
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.0e-117 428.3 591 42.5
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 1.3e-117 427.9 595 43.0
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 2.5e-116 423.7 619 42.8
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.6e-115 421.0 602 43.0
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 2.1e-115 420.6 598 42.1
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 3.6e-115 419.9 590 41.7
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 2.3e-114 417.2 626 42.3
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 1.1e-111 408.3 673 39.5
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 1.2e-110 404.8 668 40.7
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 4.5e-110 402.9 594 41.8
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 1.2e-107 394.8 593 41.8
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 5.7e-105 386.0 581 40.3
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 5.7e-105 386.0 590 39.0
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 1.3e-104 384.8 585 40.2
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 3.7e-104 383.3 600 41.8
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 2.0e-102 377.5 621 37.2
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 2.6e-102 377.1 589 37.9
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 1.3e-101 374.8 493 47.9
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 2.9e-101 373.6 586 39.9
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 3.2e-100 370.2 593 40.8
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 5.5e-100 369.4 583 39.8
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 1.2e-99 368.2 625 37.9
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 3.6e-99 366.7 586 38.9
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 2.3e-98 364.0 586 39.2
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 8.8e-98 362.1 586 37.7
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 8.8e-98 362.1 590 39.8
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 2.0e-97 360.9 637 37.0
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 7.5e-97 359.0 598 39.1
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 9.7e-97 358.6 587 38.0
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 8.2e-96 355.5 585 37.8
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.1e-95 355.1 559 37.0
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 1.1e-95 355.1 562 40.6
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 3.1e-95 353.6 582 38.8
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 5.3e-95 352.8 603 36.5
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 1.2e-94 351.7 581 38.4
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 1.2e-94 351.7 589 37.9
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 2.0e-94 350.9 587 38.7
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 2.7e-94 350.5 600 37.7
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 1.7e-93 347.8 588 37.8
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 2.2e-93 347.4 596 36.6
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 2.2e-93 347.4 606 38.4
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 5.0e-93 346.3 624 37.5
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 1.9e-92 344.4 604 38.2
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 5.5e-92 342.8 596 37.9
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 2.1e-91 340.9 590 37.5
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 2.7e-91 340.5 585 37.4
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 8.0e-91 339.0 609 36.0
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.0e-90 338.6 624 37.3
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 5.2e-90 336.3 595 38.0
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 5.2e-90 336.3 429 47.3
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 6.8e-90 335.9 639 36.3
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 6.8e-90 335.9 652 34.0
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 8.8e-90 335.5 582 36.9
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 1.2e-89 335.1 511 40.1
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 1.2e-89 335.1 610 37.9
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 4.8e-88 329.7 583 36.2
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 2.3e-85 320.9 587 36.5
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 2.1e-83 314.3 433 42.5
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 4.7e-83 313.2 513 37.8
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 8.9e-82 308.9 618 34.1
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 2.2e-80 304.3 624 35.3
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 2.2e-80 304.3 591 37.4
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 8.3e-80 302.4 585 36.9
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.8e-79 301.2 535 38.1
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 3.1e-79 300.4 615 34.6
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.6e-78 298.1 511 38.4
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 5.0e-77 293.1 585 35.4
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 4.3e-76 290.0 573 35.3
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 1.6e-75 288.1 693 32.8
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 2.6e-73 280.8 586 34.8
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.2e-70 271.9 593 34.7
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 6.2e-67 259.6 281 50.2
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 1.8e-66 258.1 613 32.1
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 7.5e-65 252.7 578 32.4
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 7.5e-65 252.7 449 37.9
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 3.2e-63 247.3 587 32.5
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 2.1e-62 244.6 259 47.1
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 2.1e-62 244.6 588 32.3
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 3.0e-61 240.7 292 44.9
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 3.9e-61 240.4 415 37.1
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 5.0e-61 240.0 588 32.3
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 1.5e-60 238.4 597 31.3
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 1.5e-60 238.4 436 36.0
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 5.6e-60 236.5 600 31.8
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 7.3e-60 236.1 587 32.0
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 1.6e-59 235.0 577 31.5
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 2.1e-59 234.6 576 31.9
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 1.2e-57 228.8 278 44.6
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 1.2e-57 228.8 572 30.1
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 5.8e-57 226.5 571 32.4
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 4.6e-54 216.9 425 35.3
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 1.7e-53 214.9 611 30.3
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 2.3e-53 214.5 289 41.2
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 3.9e-53 213.8 582 30.2
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 3.9e-53 213.8 585 30.1
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 5.1e-53 213.4 582 30.4
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 1.9e-52 211.5 576 30.6
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 7.3e-52 209.5 237 48.5
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 9.5e-52 209.1 606 29.9
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 3.6e-51 207.2 250 47.2
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 1.4e-50 205.3 218 47.7
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 1.4e-50 205.3 453 32.9
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 4.9e-48 196.8 383 36.3
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 2.1e-43 181.4 192 47.4
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 1.6e-38 165.2 408 32.6
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 6.6e-37 159.8 285 36.1
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 3.3e-36 157.5 568 25.9
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 7.3e-36 156.4 292 37.3
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 4.8e-35 153.7 236 40.7
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 4.8e-35 153.7 237 40.9
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 1.1e-34 152.5 253 36.8
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 5.8e-33 146.7 449 29.6
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 9.9e-33 146.0 157 50.3
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 4.2e-31 140.6 303 32.0
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 4.6e-30 137.1 559 23.3
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 8.7e-29 132.9 159 45.9
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 3.3e-28 131.0 187 38.0
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 5.6e-28 130.2 154 46.1
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 1.6e-27 128.6 198 40.4
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 9.0e-26 122.9 257 35.0
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 6.4e-24 116.7 304 31.2
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 8.4e-24 116.3 138 45.7
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 4.3e-20 104.0 442 25.3
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 2.1e-19 101.7 168 39.9
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-17 95.9 135 38.5
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 1.1e-10 72.8 232 26.3
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 4.1e-10 70.9 69 53.6
Lsat_1_v5_gn_3_6421 Lactuca sativa HOM05D001481 ORTHO05D014225 2.2e-08 65.1 67 49.3
unitig_26.g10043 Utricularia gibba HOM05D004843 ORTHO05D005833 5.0e-08 63.9 78 44.9


User provided reference genes

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