Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0300491 Helianthus annuus HOM05D008452 ORTHO05D010294 6.7e-60 233.8 116 100.0
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 4.8e-58 227.6 116 98.3
HanXRQChr13g0402781 Helianthus annuus HOM05D008452 ORTHO05D010294 4.8e-58 227.6 116 98.3
HanXRQChr01g0011531 Helianthus annuus HOM05D008452 ORTHO05D010294 6.2e-58 227.3 116 97.4
HanXRQChr09g0243031 Helianthus annuus HOM05D008452 ORTHO05D010294 6.2e-58 227.3 116 97.4
HanXRQChr09g0253301 Helianthus annuus HOM05D008452 ORTHO05D010294 6.2e-58 227.3 116 97.4
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 6.2e-58 227.3 116 97.4
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 6.2e-58 227.3 116 97.4
HanXRQChr13g0403321 Helianthus annuus HOM05D008452 ORTHO05D010294 1.4e-57 226.1 116 97.4
HanXRQChr03g0077561 Helianthus annuus HOM05D008452 ORTHO05D010294 3.1e-57 224.9 116 96.6
HanXRQChr04g0119771 Helianthus annuus HOM05D008452 ORTHO05D010294 5.7e-35 151.0 71 100.0
Lsat_1_v5_gn_3_84721 Lactuca sativa HOM05D008452 ORTHO05D010294 7.7e-24 114.0 110 53.6
Lsat_1_v5_gn_5_25601 Lactuca sativa HOM05D008452 ORTHO05D010294 2.7e-21 105.5 90 55.6
Lsat_1_v5_gn_1_8180 Lactuca sativa HOM05D008452 ORTHO05D010294 2.0e-19 99.4 79 59.5
Lsat_1_v5_gn_8_10480 Lactuca sativa HOM05D008452 ORTHO05D010294 3.4e-19 98.6 104 50.0
Lsat_1_v5_gn_3_12080 Lactuca sativa HOM05D008452 ORTHO05D010294 1.4e-17 93.2 111 45.9
Lsat_1_v5_gn_8_116720 Lactuca sativa HOM05D008452 ORTHO05D010294 5.3e-17 91.3 72 59.7
Lsat_1_v5_gn_9_54600 Lactuca sativa HOM05D008452 ORTHO05D010294 2.5e-14 82.4 111 42.3
Lsat_1_v5_gn_9_89720 Lactuca sativa HOM05D008452 ORTHO05D010294 2.0e-11 72.8 59 59.3
PSO528G0157 Papaver somniferum HOM05D010879 ORTHO05D010294 3.4e-11 72.0 97 39.2
PSO210G5528 Papaver somniferum HOM05D010879 ORTHO05D010294 1.3e-10 70.1 97 39.2
Lj2g0002143 Lotus japonicus HOM05D002644 ORTHO05D003267 3.1e-09 65.5 94 43.6
PSO675G7919 Papaver somniferum HOM05D010879 ORTHO05D010294 4.1e-09 65.1 79 39.2
PSO017G7209 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO063G2271 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO210G4529 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO223G0075 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO339G0939 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO339G6517 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO384G2643 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO423G0281 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO675G4514 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO675G8923 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO724G0648 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO761G0148 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO781G0306 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO832G0405 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
PSO832G1619 Papaver somniferum HOM05D010879 ORTHO05D010294 5.4e-09 64.7 68 42.6
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 7.0e-09 64.3 71 45.1
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-07 60.1 71 43.7
RcHm_v2.0_Chr2g0095181 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-07 60.1 98 36.7
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 2.9e-07 58.9 71 42.3
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-07 58.9 70 48.6
FAN12G1860 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.8e-07 58.5 73 43.8
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 3.8e-07 58.5 94 39.4
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 3.8e-07 58.5 94 39.4
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 5.0e-07 58.2 74 43.2
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 5.0e-07 58.2 74 41.9
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 5.0e-07 58.2 71 42.3
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 6.6e-07 57.8 74 43.2
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 6.6e-07 57.8 87 41.4
RcHm_v2.0_Chr6g0272451 Rosa chinensis HOM05D000539 ORTHO05D000592 6.6e-07 57.8 72 43.1
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 6.6e-07 57.8 70 42.9
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 6.6e-07 57.8 89 43.8
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-07 57.4 72 45.8
RcHm_v2.0_Chr5g0072991 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-07 57.4 72 43.1
RcHm_v2.0_Chr2g0160781 Rosa chinensis HOM05D000539 ORTHO05D010294 1.1e-06 57.0 70 41.4
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-06 57.0 70 41.4
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-06 57.0 70 41.4
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.9e-06 56.2 70 45.7
MBI11_g23345_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 3.3e-06 55.5 66 43.9
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-06 55.5 72 44.4
TPR.G687 Trifolium pratense HOM05D007793 ORTHO05D010104 3.3e-06 55.5 78 42.3
AUR62026574 Chenopodium quinoa HOM05D002644 ORTHO05D000233 4.2e-06 55.1 90 37.8
Lsat_1_v5_gn_5_147380 Lactuca sativa HOM05D008452 ORTHO05D010294 4.2e-06 55.1 37 67.6
PSO782G4622 Papaver somniferum HOM05D010879 ORTHO05D010294 5.5e-06 54.7 68 36.8
FAN03G1489 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN06G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN06G3425 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN06G4635 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN07G1063 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN13G0463 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.2e-06 54.3 80 41.2
FAN16G2445 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN16G3090 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.2e-06 54.3 80 41.2
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.2e-06 54.3 80 41.2
FAN20G0711 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN21G1450 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN23G1544 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN23G2427 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.2e-06 54.3 80 41.2
FAN26G0996 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN26G1947 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN26G3280 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN26G3431 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN27G0332 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN27G2859 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN28G0602 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
FAN28G2676 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.2e-06 54.3 80 41.2
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 7.2e-06 54.3 68 42.6
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 9.5e-06 53.9 65 44.6
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 9.5e-06 53.9 70 44.3
RcHm_v2.0_Chr2g0102071 Rosa chinensis HOM05D000539 ORTHO05D000592 9.5e-06 53.9 98 38.8


User provided reference genes

Program Settings