Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0300121 Helianthus annuus HOM05D002914 ORTHO05D003196 3.7e-48 194.9 124 100.0
Lsat_1_v5_gn_9_28661 Lactuca sativa HOM05D002914 ORTHO05D003196 9.1e-31 137.1 127 75.6
CSS0032433 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 2.4e-23 112.5 110 71.8
Dinv18053 Davidia involucrata HOM05D002914 ORTHO05D003196 3.1e-23 112.1 86 69.8
TAR623G0040 Trochodendron aralioides HOM05D002914 ORTHO05D003196 3.1e-23 112.1 102 65.7
Oeu000823.1 Olea europaea HOM05D002914 ORTHO05D003196 8.5e-21 104.0 86 64.0
Aqoxy2G00187 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 1.5e-20 103.2 80 71.2
EL10Ac3g07073 Beta vulgaris HOM05D002914 ORTHO05D003196 4.2e-20 101.7 86 61.6
ECA247G2219 Erigeron canadensis HOM05D000031 ORTHO05D000003 4.2e-20 101.7 93 60.2
Lsat_1_v5_gn_5_161660 Lactuca sativa HOM05D002914 ORTHO05D003196 4.2e-20 101.7 84 69.0
Ah.04g151670 Amaranthus hybridus HOM05D002914 ORTHO05D003196 9.4e-20 100.5 86 61.6
Nitab4.5_0005892g0010 Nicotiana tabacum HOM05D002914 ORTHO05D003196 2.1e-19 99.4 88 63.6
Hma1.2p1_1847F.1_g305210 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 3.6e-19 98.6 84 66.7
MD14G1070500 Malus domestica HOM05D002914 ORTHO05D003196 4.7e-19 98.2 87 60.9
Atru.chr1.1072 Acer truncatum HOM05D002914 ORTHO05D003196 1.4e-18 96.7 103 53.4
COL.COLO4_28237 Corchorus olitorius HOM05D002914 ORTHO05D003196 1.8e-18 96.3 85 61.2
AT3G57500 Arabidopsis thaliana HOM05D002914 ORTHO05D003196 3.0e-18 95.5 116 60.3
CiPaw.09G037100 Carya illinoinensis HOM05D002914 ORTHO05D003196 3.0e-18 95.5 86 65.1
Sc13g0001830 Simmondsia chinensis HOM05D002914 ORTHO05D003196 3.0e-18 95.5 97 55.7
Nn7g36239 Nelumbo nucifera HOM05D002914 ORTHO05D003196 4.0e-18 95.1 85 62.4
A09p50360 Brassica napus HOM05D002914 ORTHO05D003196 2.0e-17 92.8 88 56.8
C08p33030 Brassica napus HOM05D002914 ORTHO05D003196 2.0e-17 92.8 88 56.8
BolC8t50903H Brassica oleracea HOM05D002914 ORTHO05D003196 2.0e-17 92.8 88 56.8
BraA09t40488Z Brassica rapa HOM05D002914 ORTHO05D003196 2.0e-17 92.8 88 56.8
Duzib093G1261 Durio zibethinus HOM05D002914 ORTHO05D003196 2.0e-17 92.8 88 63.6
Prupe.7G063700 Prunus persica HOM05D002914 ORTHO05D003196 2.0e-17 92.8 86 62.8
Thecc.05G158000 Theobroma cacao HOM05D002914 ORTHO05D003196 2.0e-17 92.8 86 62.8
Manes.09G023600 Manihot esculenta HOM05D002914 ORTHO05D003196 2.6e-17 92.4 85 62.4
BcaC07g40375 Brassica carinata HOM05D002914 ORTHO05D003196 3.4e-17 92.0 79 59.5
BcaB02g08314 Brassica carinata HOM05D002914 ORTHO05D003196 4.4e-17 91.7 91 56.0
Gohir.A09G123100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 4.4e-17 91.7 86 60.5
Gorai.006G137500 Gossypium raimondii HOM05D002914 ORTHO05D003196 4.4e-17 91.7 86 60.5
Ciclev10006230m.g Citrus clementina HOM05D002914 ORTHO05D003196 5.7e-17 91.3 84 60.7
Medtr7g091830 Medicago truncatula HOM05D002914 ORTHO05D003196 5.7e-17 91.3 74 64.9
RcHm_v2.0_Chr3g0481701 Rosa chinensis HOM05D002914 ORTHO05D003196 7.5e-17 90.9 104 53.8
CANSAT80G1635 Cannabis sativa HOM05D002914 ORTHO05D003196 9.8e-17 90.5 80 60.0
Carub.0005s2434 Capsella rubella HOM05D002914 ORTHO05D003196 9.8e-17 90.5 85 60.0
AL5G39080 Arabidopsis lyrata HOM05D002914 ORTHO05D003196 1.3e-16 90.1 85 60.0
Gohir.D09G120100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.3e-16 90.1 86 59.3
Nn2g15303 Nelumbo nucifera HOM05D002914 ORTHO05D003196 2.2e-16 89.4 81 55.6
TWI74G1608 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 2.2e-16 89.4 69 73.9
Thhalv10006376m.g Eutrema salsugineum HOM05D002914 ORTHO05D003196 2.8e-16 89.0 85 58.8
Peaxi162Scf00493g00035 Petunia axillaris HOM05D002914 ORTHO05D003196 2.8e-16 89.0 82 67.1
Phvul.001G135000 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 2.8e-16 89.0 83 59.0
QL07p000101 Quercus lobata HOM05D002914 ORTHO05D003196 2.8e-16 89.0 100 51.0
SGA_v2.0_scaffold105G30420 Striga asiatica HOM05D002914 ORTHO05D003196 2.8e-16 89.0 86 61.6
TPR.G27766 Trifolium pratense HOM05D002914 ORTHO05D003196 2.8e-16 89.0 74 63.5
Manes.08G049900 Manihot esculenta HOM05D002914 ORTHO05D003196 3.7e-16 88.6 81 60.5
CARHR167710 Cardamine hirsuta HOM05D002914 ORTHO05D003196 4.8e-16 88.2 78 57.7
Psat3g072240 Pisum sativum HOM05D002914 ORTHO05D003196 4.8e-16 88.2 78 61.5
A04p03090 Brassica napus HOM05D002914 ORTHO05D003196 8.3e-16 87.4 82 56.1
BraA04t16032Z Brassica rapa HOM05D002914 ORTHO05D003196 8.3e-16 87.4 82 56.1
Cpa.g.sc92.38 Carica papaya HOM05D002914 ORTHO05D003196 8.3e-16 87.4 85 56.5
Ca_08467_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 8.3e-16 87.4 70 65.7
Potri.006G052500 Populus trichocarpa HOM05D002914 ORTHO05D003196 8.3e-16 87.4 84 60.7
Glyma.19G140500 Glycine max HOM05D002914 ORTHO05D003196 1.4e-15 86.7 78 61.5
Lalb_Chr20g0110761 Lupinus albus HOM05D002914 ORTHO05D003196 1.4e-15 86.7 70 67.1
VMungo1383G1568 Vigna mungo HOM05D002914 ORTHO05D003196 1.4e-15 86.7 78 61.5
BcaC08g44849 Brassica carinata HOM05D002914 ORTHO05D003196 3.1e-15 85.5 94 53.2
Lj1g0015891 Lotus japonicus HOM05D002914 ORTHO05D003196 4.1e-15 85.1 87 55.2
BcaB02g07599 Brassica carinata HOM05D002914 ORTHO05D003196 1.2e-14 83.6 91 52.7
A07p23450 Brassica napus HOM05D002914 ORTHO05D003196 1.6e-14 83.2 94 53.2
Sp5g05100 Schrenkiella parvula HOM05D002914 ORTHO05D003196 1.6e-14 83.2 95 52.6
THA.LOC104802149 Tarenaya hassleriana HOM05D002914 ORTHO05D003196 2.7e-14 82.4 76 63.2
FAN09G0984 Fragaria x ananassa HOM05D002914 ORTHO05D003196 3.5e-14 82.0 104 50.0
Sopen04g007610 Solanum pennellii HOM05D002914 ORTHO05D003196 7.7e-14 80.9 86 54.7
PGSC0003DMG400027270 Solanum tuberosum HOM05D002914 ORTHO05D003196 7.7e-14 80.9 90 52.2
Cfa016832 Carpinus fangiana HOM05D002914 ORTHO05D003196 1.0e-13 80.5 87 58.6
FvH4_6g23590 Fragaria vesca HOM05D002914 ORTHO05D003196 1.7e-13 79.7 104 49.0
Migut.K00083 Erythranthe guttata HOM05D002914 ORTHO05D003196 3.8e-13 78.6 85 60.0
Solyc04g015540.1 Solanum lycopersicum HOM05D002914 ORTHO05D003196 3.8e-13 78.6 85 54.1
BcaC02g09941 Brassica carinata HOM05D002914 ORTHO05D003196 5.0e-13 78.2 84 53.6
C04p34950 Brassica napus HOM05D002914 ORTHO05D003196 1.1e-12 77.0 75 56.0
BolC4t25049H Brassica oleracea HOM05D002914 ORTHO05D003196 1.1e-12 77.0 75 56.0
Duzib128G0409 Durio zibethinus HOM05D002914 ORTHO05D003196 1.5e-12 76.6 95 49.5
Gohir.D01G121050 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.5e-12 76.6 68 61.8
AUR62024432 Chenopodium quinoa HOM05D002914 ORTHO05D003196 1.9e-12 76.3 65 64.6
Gohir.A01G132111 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.9e-12 76.3 68 61.8
Gorai.002G147700 Gossypium raimondii HOM05D002914 ORTHO05D003196 1.9e-12 76.3 68 61.8
ATR0332G006 Amborella trichopoda HOM05D002914 ORTHO05D003196 1.2e-11 73.6 75 57.3
Sabra06G0036900 Salix brachista HOM05D002914 ORTHO05D003196 6.1e-11 71.2 61 63.9
DCAR_020485 Daucus carota HOM05D002914 ORTHO05D003196 1.0e-10 70.5 92 47.8
Os03g0696150 Oryza sativa ssp. japonica HOM05D002914 ORTHO05D003196 1.0e-10 70.5 63 55.6
Actinidia17240 Actinidia chinensis HOM05D002914 ORTHO05D003196 3.0e-10 68.9 87 47.1
Aqoxy5G01394 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 5.2e-10 68.2 80 47.5
Atru.chr5.2809 Acer truncatum HOM05D002914 ORTHO05D003196 6.8e-10 67.8 84 46.4
Dinv42126 Davidia involucrata HOM05D002914 ORTHO05D003196 4.4e-09 65.1 80 45.0
ClCG04G003270 Citrullus lanatus HOM05D002914 ORTHO05D003196 7.5e-09 64.3 74 50.0
Migut.J01766 Erythranthe guttata HOM05D002914 ORTHO05D003196 2.2e-08 62.8 83 47.0
Hma1.2p1_0584F.1_g183120 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 2.2e-08 62.8 78 48.7
MBI02_g05666_MAGBIO Magnolia biondii HOM05D002914 ORTHO05D003196 2.8e-08 62.4 87 43.7
RcHm_v2.0_Chr6g0259071 Rosa chinensis HOM05D002914 ORTHO05D003196 6.3e-08 61.2 88 46.6
MELO3C028578.2 Cucumis melo HOM05D002914 ORTHO05D003196 4.1e-07 58.5 84 46.4
arahy.Tifrunner.gnm1.ann1.TRJ4SS Arachis hypogaea HOM05D002914 ORTHO05D003196 5.4e-07 58.2 37 67.6
ClCG02G005720 Citrullus lanatus HOM05D002914 ORTHO05D003196 7.0e-07 57.8 84 46.4
MELO3C023115.2 Cucumis melo HOM05D002914 ORTHO05D003196 7.0e-07 57.8 74 48.6
TWI31G1086 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 7.0e-07 57.8 90 45.6
Atru.chr13.614 Acer truncatum HOM05D002914 ORTHO05D003196 9.2e-07 57.4 79 43.0
CsaV3_7G008810 Cucumis sativus L. HOM05D002914 ORTHO05D003196 9.2e-07 57.4 84 45.2
Duzib052G1256 Durio zibethinus HOM05D002914 ORTHO05D003196 9.2e-07 57.4 83 43.4
Gorai.005G104900 Gossypium raimondii HOM05D002914 ORTHO05D003196 1.2e-06 57.0 85 45.9
Oeu013680.1 Olea europaea HOM05D002914 ORTHO05D003196 1.2e-06 57.0 94 38.3
ATR0225G004 Amborella trichopoda HOM05D002914 ORTHO05D003196 1.6e-06 56.6 81 40.7
CsaV3_4G011800 Cucumis sativus L. HOM05D002914 ORTHO05D003196 1.6e-06 56.6 74 48.6
Thecc.08G014700 Theobroma cacao HOM05D002914 ORTHO05D003196 1.6e-06 56.6 83 45.8
Medtr4g086780 Medicago truncatula HOM05D002914 ORTHO05D003196 3.5e-06 55.5 73 42.5
HPP92_023573 Vanilla planifolia HOM05D002914 ORTHO05D003196 3.5e-06 55.5 64 46.9
Atru.ctg24.30 Acer truncatum HOM05D002914 ORTHO05D003196 4.5e-06 55.1 46 60.9
SGA_v2.0_scaffold58G20610 Striga asiatica HOM05D002914 ORTHO05D003196 4.5e-06 55.1 87 35.6
Gohir.D02G092940 Gossypium hirsutum HOM05D002914 ORTHO05D003196 5.9e-06 54.7 85 44.7
Duzib248G0090 Durio zibethinus HOM05D002914 ORTHO05D003196 7.7e-06 54.3 74 44.6


User provided reference genes

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