Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0300061 Helianthus annuus HOM05D004060 ORTHO05D004967 2.5e-108 395.6 219 100.0
Lsat_1_v5_gn_9_27220 Lactuca sativa HOM05D004060 ORTHO05D004967 5.7e-60 235.0 221 70.1
ECA247G2970 Erigeron canadensis HOM05D004060 ORTHO05D004967 1.6e-51 206.8 165 74.5
ECA247G3737 Erigeron canadensis HOM05D003799 ORTHO05D001964 1.6e-51 206.8 163 75.5
SGA_v2.0_scaffold69G23102 Striga asiatica HOM05D004060 ORTHO05D004967 3.6e-30 136.0 239 47.7
Lju124C36T16 Lonicera japonica HOM05D004060 ORTHO05D004967 4.0e-29 132.5 246 41.9
Cpa.g.sc92.28 Carica papaya HOM05D004060 ORTHO05D004967 1.3e-27 127.5 125 64.0
Oeu064312.1 Olea europaea HOM05D004060 ORTHO05D004967 4.5e-25 119.0 242 43.0
HanXRQChr05g0132091 Helianthus annuus HOM05D004060 ORTHO05D004967 1.1e-23 114.4 207 48.3
MSTRG.10823 Avicennia marina HOM05D004060 ORTHO05D004967 1.5e-23 114.0 144 55.6
Peaxi162Scf00493g00316 Petunia axillaris HOM05D004060 ORTHO05D004967 1.9e-23 113.6 200 40.0
Oeu017953.1 Olea europaea HOM05D004060 ORTHO05D004967 9.4e-23 111.3 240 42.5
Lsat_1_v5_gn_8_79621 Lactuca sativa HOM05D004060 ORTHO05D001964 2.1e-22 110.2 176 46.0
MBI02_g05658_MAGBIO Magnolia biondii HOM05D004060 ORTHO05D004967 7.5e-20 101.7 222 40.1
Haze_19892 Corylus avellana HOM05D004060 ORTHO05D004967 2.8e-19 99.8 228 41.7
Haze_19884 Corylus avellana HOM05D004060 ORTHO05D004967 4.8e-19 99.0 228 41.7
C04p03110 Brassica napus HOM05D004060 ORTHO05D004967 9.1e-18 94.7 142 50.0
BolC4t21952H Brassica oleracea HOM05D004060 ORTHO05D004967 9.1e-18 94.7 142 50.0
Hund24724 Selenicereus undatus HOM05D004060 ORTHO05D004967 1.2e-17 94.4 228 42.1
Cfa016842 Carpinus fangiana HOM05D004060 ORTHO05D004967 2.7e-17 93.2 228 42.5
CARHR136960 Cardamine hirsuta HOM05D004060 ORTHO05D004967 7.7e-17 91.7 145 47.6
HPP92_019624 Vanilla planifolia HOM05D004060 ORTHO05D004967 7.7e-17 91.7 272 34.9
MBI04_g36073_MAGBIO Magnolia biondii HOM05D004060 ORTHO05D004967 1.0e-16 91.3 237 30.8
PGR004G1680 Punica granatum HOM05D004060 ORTHO05D004967 1.0e-16 91.3 227 40.1
Dinv02134 Davidia involucrata HOM05D004060 ORTHO05D004967 5.0e-16 89.0 247 37.7
Oeu033785.1 Olea europaea HOM05D004060 ORTHO05D004967 3.2e-15 86.3 230 39.1
Medtr1g052560 Medicago truncatula HOM05D004060 ORTHO05D004967 4.2e-15 85.9 271 36.2
Duzib093G0278 Durio zibethinus HOM05D004060 ORTHO05D004967 7.2e-15 85.1 196 37.2
Nn2g15346 Nelumbo nucifera HOM05D004060 ORTHO05D004967 1.2e-14 84.3 184 35.9
Actinidia24529 Actinidia chinensis HOM05D004060 ORTHO05D004967 1.6e-14 84.0 162 39.5
RcHm_v2.0_Chr3g0481501 Rosa chinensis HOM05D004060 ORTHO05D004967 1.6e-14 84.0 264 34.8
vmacro22363 Vaccinium macrocarpon HOM05D004060 ORTHO05D004967 1.6e-14 84.0 248 36.3
Zm00001eb107230 Zea mays HOM05D004060 ORTHO05D004967 2.1e-14 83.6 240 36.2
Lj2C380T14 Lonicera japonica HOM05D004060 ORTHO05D004967 3.6e-14 82.8 92 52.2
PGSC0003DMG400027238 Solanum tuberosum HOM05D004060 ORTHO05D004967 4.7e-14 82.4 139 48.9
Solyc04g015520.3 Solanum lycopersicum HOM05D004060 ORTHO05D004967 6.1e-14 82.0 139 48.9
Phvul.001G135500 Phaseolus vulgaris HOM05D004060 ORTHO05D004967 8.0e-14 81.6 196 35.7
Prupe.7G064800 Prunus persica HOM05D004060 ORTHO05D004967 8.0e-14 81.6 242 38.0
Dinv18064 Davidia involucrata HOM05D004060 ORTHO05D004967 1.0e-13 81.3 232 38.4
Sopen04g007590 Solanum pennellii HOM05D004060 ORTHO05D004967 1.0e-13 81.3 139 48.9
Dinv02133 Davidia involucrata HOM05D004060 ORTHO05D004967 3.0e-13 79.7 222 40.1
Duzib128G1686 Durio zibethinus HOM05D004060 ORTHO05D004967 3.0e-13 79.7 251 35.9
Eucgr.A02379 Eucalyptus grandis HOM05D004060 ORTHO05D004967 3.0e-13 79.7 234 37.2
TAR369G1158 Trochodendron aralioides HOM05D004060 ORTHO05D004967 3.0e-13 79.7 120 54.2
Nn7g36226 Nelumbo nucifera HOM05D004060 ORTHO05D004967 6.8e-13 78.6 178 36.0
FAN02G3665 Fragaria x ananassa HOM05D004060 ORTHO05D004967 8.8e-13 78.2 264 34.8
Solyc10g080230.2 Solanum lycopersicum HOM05D004060 ORTHO05D004967 8.8e-13 78.2 78 50.0
Glyma.03G138100 Glycine max HOM05D004060 ORTHO05D004967 2.0e-12 77.0 191 36.1
MSTRG.6438 Avicennia marina HOM05D004060 ORTHO05D004967 2.6e-12 76.6 263 37.3
MD14G1069500 Malus domestica HOM05D004060 ORTHO05D004967 2.6e-12 76.6 126 49.2
MSTRG.19874 Avicennia marina HOM05D004060 ORTHO05D004967 4.4e-12 75.9 161 44.1
QL07p021067 Quercus lobata HOM05D004060 ORTHO05D004967 4.4e-12 75.9 268 35.1
TAR057G0003 Trochodendron aralioides HOM05D004060 ORTHO05D004967 4.4e-12 75.9 224 38.8
FAN05G0004 Fragaria x ananassa HOM05D004060 ORTHO05D004967 5.7e-12 75.5 161 44.7
FAN05G5649 Fragaria x ananassa HOM05D004060 ORTHO05D004967 5.7e-12 75.5 161 44.7
FAN09G1680 Fragaria x ananassa HOM05D004060 ORTHO05D004967 5.7e-12 75.5 161 44.7
PSO384G1698 Papaver somniferum HOM05D004060 ORTHO05D004967 5.7e-12 75.5 62 59.7
PSO339G1536 Papaver somniferum HOM05D004060 ORTHO05D004967 9.8e-12 74.7 120 49.2
Peaxi162Scf01287g00012 Petunia axillaris HOM05D004060 ORTHO05D004967 9.8e-12 74.7 220 37.7
Cc06_g16910 Coffea canephora HOM05D004060 ORTHO05D004967 1.7e-11 73.9 228 38.6
Rhsim03G0018200 Rhododendron simsii HOM05D004060 ORTHO05D004967 1.7e-11 73.9 272 34.6
TPR.G21399 Trifolium pratense HOM05D004060 ORTHO05D004967 2.8e-11 73.2 260 34.2
arahy.Tifrunner.gnm1.ann1.N3K66E Arachis hypogaea HOM05D003004 ORTHO05D004967 3.7e-11 72.8 62 58.1
CiPaw.09G036400 Carya illinoinensis HOM05D004060 ORTHO05D004967 8.3e-11 71.6 141 44.7
ECA248G2911 Erigeron canadensis HOM05D004060 ORTHO05D004967 2.4e-10 70.1 259 34.7
TAR633G1984 Trochodendron aralioides HOM05D004060 ORTHO05D004967 2.4e-10 70.1 200 37.5
Aqoxy1G00285 Aquilegia oxysepala HOM05D004060 ORTHO05D004967 3.1e-10 69.7 253 33.2
EL10Ac3g07036 Beta vulgaris HOM05D004060 ORTHO05D004967 3.1e-10 69.7 126 48.4
Lsat_1_v5_gn_5_162320 Lactuca sativa HOM05D004060 ORTHO05D004967 3.1e-10 69.7 260 34.2
CANSAT80G2886 Cannabis sativa HOM05D004060 ORTHO05D004967 4.1e-10 69.3 126 47.6
Manes.08G049300 Manihot esculenta HOM05D004060 ORTHO05D004967 4.1e-10 69.3 254 36.2
arahy.Tifrunner.gnm1.ann1.49FMRE Arachis hypogaea HOM05D004060 ORTHO05D004967 5.4e-10 68.9 132 45.5
FvH4_6g23510 Fragaria vesca HOM05D004060 ORTHO05D004967 5.4e-10 68.9 262 33.6
FAN14G3078 Fragaria x ananassa HOM05D004060 ORTHO05D004967 5.4e-10 68.9 262 33.6
TWI74G0684 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 5.4e-10 68.9 250 34.4
Potri.016G054400 Populus trichocarpa HOM05D004060 ORTHO05D004967 7.0e-10 68.6 260 35.4
Actinidia09345 Actinidia chinensis HOM05D004060 ORTHO05D004967 9.2e-10 68.2 223 38.1
ECA236G0930 Erigeron canadensis HOM05D004060 ORTHO05D001964 9.2e-10 68.2 120 49.2
Zm00001eb061820 Zea mays HOM05D004060 ORTHO05D004967 9.2e-10 68.2 194 31.4
Gohir.A11G312000 Gossypium hirsutum HOM05D004060 ORTHO05D004967 1.6e-09 67.4 268 33.6
AUR62024421 Chenopodium quinoa HOM05D004060 ORTHO05D004967 2.7e-09 66.6 65 72.3
Ciclev10005594m.g Citrus clementina HOM05D004060 ORTHO05D004967 3.5e-09 66.2 251 36.3
Hma1.2p1_0696F.1_g204640 Hydrangea macrophylla HOM05D004060 ORTHO05D004967 3.5e-09 66.2 264 33.7
Pp3c12_4280 Physcomitrium patens HOM05D001293 ORTHO05D006204 3.5e-09 66.2 124 27.4
Thecc.05G159200 Theobroma cacao HOM05D004060 ORTHO05D004967 3.5e-09 66.2 260 32.7
Os03g0808300 Oryza sativa ssp. japonica HOM05D004060 ORTHO05D004967 4.5e-09 65.9 185 38.9
BcaB02g07595 Brassica carinata HOM05D004060 ORTHO05D004967 5.9e-09 65.5 125 43.2
DCAR_013590 Daucus carota HOM05D004060 ORTHO05D004967 5.9e-09 65.5 227 34.4
Sabra06G0037600 Salix brachista HOM05D004060 ORTHO05D004967 5.9e-09 65.5 254 35.0
vmacro22364 Vaccinium macrocarpon HOM05D004060 ORTHO05D001964 5.9e-09 65.5 63 66.7
BcaNung07195 Brassica carinata HOM05D004060 ORTHO05D004967 7.8e-09 65.1 210 36.7
SalBow6G3128 Salvia bowleyana HOM05D004060 ORTHO05D004967 7.8e-09 65.1 241 36.1
TWI77G1037 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 7.8e-09 65.1 245 34.7
TWI53G1485 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 1.0e-08 64.7 250 33.6
arahy.Tifrunner.gnm1.ann1.3TR3AL Arachis hypogaea HOM05D002100 ORTHO05D002310 1.3e-08 64.3 56 53.6
CSS0022151 Camellia sinensis var. sinensis HOM05D004060 ORTHO05D004967 1.3e-08 64.3 250 35.2
A05p02610 Brassica napus HOM05D004060 ORTHO05D004967 1.7e-08 63.9 124 44.4
BraA05t19254Z Brassica rapa HOM05D004060 ORTHO05D004967 1.7e-08 63.9 124 44.4
Lalb_Chr25g0287361 Lupinus albus HOM05D004060 ORTHO05D004967 1.7e-08 63.9 140 45.0
VMungo1383G2713 Vigna mungo HOM05D004060 ORTHO05D004967 1.7e-08 63.9 229 36.2
Sopen10g030840 Solanum pennellii HOM05D004060 ORTHO05D004967 2.3e-08 63.5 129 43.4
AUR62026012 Chenopodium quinoa HOM05D004060 ORTHO05D004967 3.8e-08 62.8 65 69.2
ATR0332G033 Amborella trichopoda HOM05D004060 ORTHO05D004967 5.0e-08 62.4 231 32.5
Ca_26888_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 5.0e-08 62.4 148 43.2
Ca_29692_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 5.0e-08 62.4 148 43.2
Gohir.A11G312100 Gossypium hirsutum HOM05D004060 ORTHO05D004967 5.0e-08 62.4 126 46.8
MD12G1072300 Malus domestica HOM05D004060 ORTHO05D004967 5.0e-08 62.4 153 41.8
Potri.006G053200 Populus trichocarpa HOM05D004060 ORTHO05D004967 5.0e-08 62.4 255 34.5
Manes.09G024700 Manihot esculenta HOM05D004060 ORTHO05D004967 6.6e-08 62.0 120 46.7
PGSC0003DMG400023721 Solanum tuberosum HOM05D004060 ORTHO05D004967 6.6e-08 62.0 260 31.9
Gohir.D11G328600 Gossypium hirsutum HOM05D004060 ORTHO05D004967 8.6e-08 61.6 254 33.5
Gorai.007G359900 Gossypium raimondii HOM05D004060 ORTHO05D004967 8.6e-08 61.6 254 33.5
Phvul.007G253600 Phaseolus vulgaris HOM05D004060 ORTHO05D004967 8.6e-08 61.6 263 32.3
Aqoxy7G00777 Aquilegia oxysepala HOM05D024910 ORTHO05D014828 1.1e-07 61.2 109 36.7
HanXRQChr01g0008631 Helianthus annuus HOM05D004060 ORTHO05D004967 2.5e-07 60.1 248 33.9
HanXRQChr10g0300071 Helianthus annuus HOM05D004060 ORTHO05D004967 2.5e-07 60.1 141 43.3
Glyma.19G141100 Glycine max HOM05D004060 ORTHO05D004967 3.3e-07 59.7 249 33.3
Lj1g0010539 Lotus japonicus HOM05D004060 ORTHO05D004967 3.3e-07 59.7 126 44.4
Hma1.2p1_0247F.1_g101840 Hydrangea macrophylla HOM05D004060 ORTHO05D004967 4.3e-07 59.3 200 36.0
Duzib106G1229 Durio zibethinus HOM05D004060 ORTHO05D004967 5.6e-07 58.9 255 32.9
Glyma.10G099400 Glycine max HOM05D004060 ORTHO05D004967 5.6e-07 58.9 120 44.2
CiPaw.10G032000 Carya illinoinensis HOM05D004060 ORTHO05D004967 7.3e-07 58.5 273 33.0
COL.COLO4_28207 Corchorus olitorius HOM05D004060 ORTHO05D004967 9.5e-07 58.2 272 32.4
Migut.J01771 Erythranthe guttata HOM05D004060 ORTHO05D004967 9.5e-07 58.2 120 44.2
Nitab4.5_0001509g0060 Nicotiana tabacum HOM05D004060 ORTHO05D004967 9.5e-07 58.2 120 44.2
Nitab4.5_0001663g0020 Nicotiana tabacum HOM05D004060 ORTHO05D004967 9.5e-07 58.2 261 32.2
SEGI_10532 Sequoiadendron giganteum HOM05D002953 ORTHO05D003249 9.5e-07 58.2 104 29.8
THA.LOC104824453 Tarenaya hassleriana HOM05D004060 ORTHO05D004967 1.2e-06 57.8 120 45.0
unitig_8.g4575 Utricularia gibba HOM05D004060 ORTHO05D004967 1.2e-06 57.8 125 36.0
arahy.Tifrunner.gnm1.ann1.L89JBM Arachis hypogaea HOM05D004060 ORTHO05D004967 1.6e-06 57.4 132 42.4
CAN.G676.50 Capsicum annuum HOM05D004060 ORTHO05D004967 1.6e-06 57.4 120 45.8
CAN.G128.15 Capsicum annuum HOM05D004060 ORTHO05D004967 2.1e-06 57.0 234 33.8
Glyma.02G182600 Glycine max HOM05D004060 ORTHO05D004967 2.1e-06 57.0 126 42.9
Nitab4.5_0000733g0190 Nicotiana tabacum HOM05D004060 ORTHO05D004967 2.1e-06 57.0 261 31.8
ClCG10G016620 Citrullus lanatus HOM05D004060 ORTHO05D004967 2.8e-06 56.6 120 42.5
Sp4g24140 Schrenkiella parvula HOM05D004060 ORTHO05D004967 2.8e-06 56.6 41 63.4
Sed0004660 Sechium edule HOM05D004060 ORTHO05D004967 2.8e-06 56.6 120 42.5
AL4G40200 Arabidopsis lyrata HOM05D004060 ORTHO05D004967 3.6e-06 56.2 142 39.4
Ca_08471_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 3.6e-06 56.2 184 32.1
Nitab4.5_0002841g0040 Nicotiana tabacum HOM05D004060 ORTHO05D004967 3.6e-06 56.2 242 32.6
Pp3c7_18930 Physcomitrium patens HOM05D001293 ORTHO05D001143 3.6e-06 56.2 116 31.0
Thecc.02G335300 Theobroma cacao HOM05D002953 ORTHO05D003249 3.6e-06 56.2 114 24.6
VMungo0720G0143 Vigna mungo HOM05D004060 ORTHO05D004967 3.6e-06 56.2 120 43.3
CARHR167760 Cardamine hirsuta HOM05D004060 ORTHO05D004967 4.7e-06 55.8 118 43.2
FAN22G1160 Fragaria x ananassa HOM05D000954 ORTHO05D003249 4.7e-06 55.8 110 27.3
MELO3C009714.2 Cucumis melo HOM05D004060 ORTHO05D004967 6.1e-06 55.5 120 42.5
CsaV3_3G039720 Cucumis sativus L. HOM05D004060 ORTHO05D004967 6.1e-06 55.5 120 42.5
Medtr7g091990 Medicago truncatula HOM05D004060 ORTHO05D004967 6.1e-06 55.5 127 41.7
Psat3g079320 Pisum sativum HOM05D004060 ORTHO05D004967 6.1e-06 55.5 178 38.2
Atru.chr1.1058 Acer truncatum HOM05D004060 ORTHO05D004967 8.0e-06 55.1 140 34.3
SalBow1G5147 Salvia bowleyana HOM05D004060 ORTHO05D004967 8.0e-06 55.1 214 36.9
Solyc10g080240.1 Solanum lycopersicum HOM05D004060 ORTHO05D004967 8.0e-06 55.1 51 54.9
TPR.G3730 Trifolium pratense HOM05D004060 ORTHO05D004967 8.0e-06 55.1 127 41.7


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